Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:02 (2087): wrapper (7.7.26015): starting
08:00:02 (2087): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:00:02] Arguments: --nthreads 8
[2025-11-25 08:00:02] Threads: 8
[2025-11-25 08:00:02] Checking for CVMFS
[2025-11-25 08:00:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:00:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:00:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:00:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:00:02] 2.11.2.0 2856 143311 86488 153283 1 81 15687346 20275201 1 130560 0 52660904 99.954 5716831 33817 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:00:02] CVMFS is ok
[2025-11-25 08:00:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:00:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:00:02] Further information can be found at the LHC@home message board.
[2025-11-25 08:00:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:00:02] Checking for apptainer binary...
[2025-11-25 08:00:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:00:02] Running /usr/bin/apptainer --version
[2025-11-25 08:00:02] apptainer version 1.3.2-1.el7
[2025-11-25 08:00:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:00:04] c-115-6.aglt2.org
[2025-11-25 08:00:04] apptainer works
[2025-11-25 08:00:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:00:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:00:04] Starting ATLAS job with PandaID=6895674357
[2025-11-25 08:00:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:01:33]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:01:33] 2025-11-26 00:00:47,863 | INFO     | monitor loop #2919: job 0:6895674357 is in state 'finished'
[2025-11-25 19:01:33] 2025-11-26 00:00:47,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:01:33] 2025-11-26 00:00:48,669 | INFO     | time since job start (39626s) is within the limit (172800.0s)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,237 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 19:01:33] 2025-11-26 00:00:49,241 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-25 19:01:33] 2025-11-26 00:00:49,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895674357/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,243 | INFO     | extracted standard info from prmon json
[2025-11-25 19:01:33] 2025-11-26 00:00:49,243 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:01:33] 2025-11-26 00:00:49,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:01:33] 2025-11-26 00:00:49,255 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:01:33] 2025-11-26 00:00:49,256 | INFO     | sum of square deviations: 84763486384.97675
[2025-11-25 19:01:33] 2025-11-26 00:00:49,264 | INFO     | sum of deviations: 688630585628.6981
[2025-11-25 19:01:33] 2025-11-26 00:00:49,264 | INFO     | mean x: 1764095417.5901387
[2025-11-25 19:01:33] 2025-11-26 00:00:49,264 | INFO     | mean y: 3151853.5778120183
[2025-11-25 19:01:33] 2025-11-26 00:00:49,264 | INFO     | intersect: -14328609525.403288
[2025-11-25 19:01:33] 2025-11-26 00:00:49,265 | INFO     | chi2: 5.731975467345961
[2025-11-25 19:01:33] 2025-11-26 00:00:49,266 | INFO     | sum of square deviations: 82819548143.22202
[2025-11-25 19:01:33] 2025-11-26 00:00:49,274 | INFO     | sum of deviations: 912199157775.9934
[2025-11-25 19:01:33] 2025-11-26 00:00:49,274 | INFO     | mean x: 1764095265.0947206
[2025-11-25 19:01:33] 2025-11-26 00:00:49,274 | INFO     | mean y: 3169384.2624223605
[2025-11-25 19:01:33] 2025-11-26 00:00:49,274 | INFO     | intersect: -19427101018.48331
[2025-11-25 19:01:33] 2025-11-26 00:00:49,275 | INFO     | chi2: 2.8350292757798314
[2025-11-25 19:01:33] 2025-11-26 00:00:49,275 | INFO     | current chi2=2.8350292757798314 (change=50.54010101874151 %)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,275 | INFO     | sum of square deviations: 80905563951.43987
[2025-11-25 19:01:33] 2025-11-26 00:00:49,283 | INFO     | sum of deviations: 960835569363.3265
[2025-11-25 19:01:33] 2025-11-26 00:00:49,283 | INFO     | mean x: 1764095112.599374
[2025-11-25 19:01:33] 2025-11-26 00:00:49,283 | INFO     | mean y: 3173246.813771518
[2025-11-25 19:01:33] 2025-11-26 00:00:49,284 | INFO     | intersect: -20947244118.088802
[2025-11-25 19:01:33] 2025-11-26 00:00:49,284 | INFO     | chi2: 2.5449752560645837
[2025-11-25 19:01:33] 2025-11-26 00:00:49,284 | INFO     | current chi2=2.5449752560645837 (change=10.231076701508226 %)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,284 | INFO     | right removable region: 638
[2025-11-25 19:01:33] 2025-11-26 00:00:49,285 | INFO     | sum of square deviations: 82819314513.22195
[2025-11-25 19:01:33] 2025-11-26 00:00:49,293 | INFO     | sum of deviations: 490008940500.53955
[2025-11-25 19:01:33] 2025-11-26 00:00:49,293 | INFO     | mean x: 1764095570.0947206
[2025-11-25 19:01:33] 2025-11-26 00:00:49,293 | INFO     | mean y: 3167403.335403727
[2025-11-25 19:01:33] 2025-11-26 00:00:49,293 | INFO     | intersect: -10434284371.344593
[2025-11-25 19:01:33] 2025-11-26 00:00:49,294 | INFO     | chi2: 3.34871363502316
[2025-11-25 19:01:33] 2025-11-26 00:00:49,294 | INFO     | current chi2=3.34871363502316 (change=41.578367630842415 %)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,295 | INFO     | sum of square deviations: 80905136219.63705
[2025-11-25 19:01:33] 2025-11-26 00:00:49,303 | INFO     | sum of deviations: 453863353328.87976
[2025-11-25 19:01:33] 2025-11-26 00:00:49,303 | INFO     | mean x: 1764095722.597809
[2025-11-25 19:01:33] 2025-11-26 00:00:49,303 | INFO     | mean y: 3170280.9139280124
[2025-11-25 19:01:33] 2025-11-26 00:00:49,303 | INFO     | intersect: -9893091411.023518
[2025-11-25 19:01:33] 2025-11-26 00:00:49,304 | INFO     | chi2: 3.319503829174278
[2025-11-25 19:01:33] 2025-11-26 00:00:49,304 | INFO     | current chi2=3.319503829174278 (change=0.8722694452993932 %)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,304 | INFO     | left removable region: 20
[2025-11-25 19:01:33] 2025-11-26 00:00:49,305 | INFO     | sum of square deviations: 73187861665.29568
[2025-11-25 19:01:33] 2025-11-26 00:00:49,312 | INFO     | sum of deviations: 670672268899.0771
[2025-11-25 19:01:33] 2025-11-26 00:00:49,312 | INFO     | mean x: 1764095692.1116505
[2025-11-25 19:01:33] 2025-11-26 00:00:49,312 | INFO     | mean y: 3196521.7669902914
[2025-11-25 19:01:33] 2025-11-26 00:00:49,312 | INFO     | intersect: -16162463103.51793
[2025-11-25 19:01:33] 2025-11-26 00:00:49,313 | INFO     | chi2: 0.08878554744086088
[2025-11-25 19:01:33] 2025-11-26 00:00:49,313 | INFO     | current memory leak: 9.16 B/s (using 618 data points, chi2=0.09)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,313 | INFO     | could have reported an average CPU frequency of 2366 MHz (25 samples)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,313 | INFO     | ..............................
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . Timing measurements:
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . get job = 0 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . initial setup = 2 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . payload setup = 8 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . stage-in = 0 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . payload execution = 39588 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . stage-out = 3 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | . log creation = 0 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,314 | INFO     | ..............................
[2025-11-25 19:01:33] 2025-11-26 00:00:49,394 | INFO     | 
[2025-11-25 19:01:33] 2025-11-26 00:00:49,394 | INFO     | job summary report
[2025-11-25 19:01:33] 2025-11-26 00:00:49,394 | INFO     | --------------------------------------------------
[2025-11-25 19:01:33] 2025-11-26 00:00:49,394 | INFO     | PanDA job id: 6895674357
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | task id: 47556149
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | errors: (none)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | pilot state: finished 
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | transexitcode: 0
[2025-11-25 19:01:33] 2025-11-26 00:00:49,395 | INFO     | exeerrorcode: 0
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | exeerrordiag: 
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | exitcode: 0
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | exitmsg: OK
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | cpuconsumptiontime: 307363 s
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | nevents: 1000
[2025-11-25 19:01:33] 2025-11-26 00:00:49,396 | INFO     | neventsw: 0
[2025-11-25 19:01:33] 2025-11-26 00:00:49,397 | INFO     | pid: 12302
[2025-11-25 19:01:33] 2025-11-26 00:00:49,397 | INFO     | pgrp: 12302
[2025-11-25 19:01:33] 2025-11-26 00:00:49,397 | INFO     | corecount: 8
[2025-11-25 19:01:33] 2025-11-26 00:00:49,397 | INFO     | event service: False
[2025-11-25 19:01:33] 2025-11-26 00:00:49,397 | INFO     | sizes: {0: 2284093, 1: 2284292, 7: 2284554, 11: 2284582, 39601: 2327975, 39604: 2337153, 39611: 2337407}
[2025-11-25 19:01:33] 2025-11-26 00:00:49,398 | INFO     | --------------------------------------------------
[2025-11-25 19:01:33] 2025-11-26 00:00:49,398 | INFO     | 
[2025-11-25 19:01:33] 2025-11-26 00:00:49,398 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 19:01:33] 2025-11-26 00:00:49,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:01:33] 2025-11-26 00:00:49,474 | INFO     | job 6895674357 has completed (purged errors)
[2025-11-25 19:01:33] 2025-11-26 00:00:49,474 | INFO     | overall cleanup function is called
[2025-11-25 19:01:33] 2025-11-26 00:00:50,489 | INFO     | --- collectZombieJob: --- 10, [12302]
[2025-11-25 19:01:33] 2025-11-26 00:00:50,490 | INFO     | zombie collector waiting for pid 12302
[2025-11-25 19:01:33] 2025-11-26 00:00:50,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:01:33] 2025-11-26 00:00:50,490 | INFO     | collected zombie processes
[2025-11-25 19:01:33] 2025-11-26 00:00:50,490 | INFO     | will attempt to kill all subprocesses of pid=12302
[2025-11-25 19:01:33] 2025-11-26 00:00:50,571 | INFO     | process IDs to be killed: [12302] (in reverse order)
[2025-11-25 19:01:33] 2025-11-26 00:00:50,624 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:01:33] 2025-11-26 00:00:50,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:01:33] 2025-11-26 00:00:50,629 | INFO     | did not find any defunct processes belonging to 12302
[2025-11-25 19:01:33] 2025-11-26 00:00:50,632 | INFO     | did not find any defunct processes belonging to 12302
[2025-11-25 19:01:33] 2025-11-26 00:00:50,635 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:01:33] 2025-11-26 00:00:50,635 | INFO     | ready for new job
[2025-11-25 19:01:33] 2025-11-26 00:00:50,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:01:33] 2025-11-26 00:00:50,638 | INFO     | ***************************************
[2025-11-25 19:01:33] 2025-11-26 00:00:50,638 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:01:33] 2025-11-26 00:00:50,638 | INFO     | ***************************************
[2025-11-25 19:01:33] 2025-11-26 00:00:50,638 | INFO     | 
[2025-11-25 19:01:33] 2025-11-26 00:00:50,639 | INFO     | architecture information:
[2025-11-25 19:01:33] 2025-11-26 00:00:50,640 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:01:33] 2025-11-26 00:00:50,658 | INFO     | cat /etc/os-release:
[2025-11-25 19:01:33] NAME="CentOS Linux"
[2025-11-25 19:01:33] VERSION="7 (Core)"
[2025-11-25 19:01:33] ID="centos"
[2025-11-25 19:01:33] ID_LIKE="rhel fedora"
[2025-11-25 19:01:33] VERSION_ID="7"
[2025-11-25 19:01:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:01:33] ANSI_COLOR="0;31"
[2025-11-25 19:01:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:01:33] HOME_URL="https://www.centos.org/"
[2025-11-25 19:01:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:01:33] 
[2025-11-25 19:01:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:01:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:01:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:01:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:01:33] 
[2025-11-25 19:01:33] 2025-11-26 00:00:50,659 | INFO     | ***************************************
[2025-11-25 19:01:33] 2025-11-26 00:00:51,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 19:01:33] 2025-11-26 00:00:51,181 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-25 19:01:33] 2025-11-26 00:00:51,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:01:33] 2025-11-26 00:00:51,181 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:01:33] 2025-11-26 00:00:51,182 | INFO     | update_server=False
[2025-11-25 19:01:33] 2025-11-26 00:00:51,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:01:33] 2025-11-26 00:00:51,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:01:33] 2025-11-26 00:00:51,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:01:33] 2025-11-26 00:00:51,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:01:33] 2025-11-26 00:00:51,371 | INFO     | aborting loop
[2025-11-25 19:01:33] 2025-11-26 00:00:51,979 | INFO     | all data control threads have been joined
[2025-11-25 19:01:33] 2025-11-26 00:00:52,185 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,186 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,316 | INFO     | all job control threads have been joined
[2025-11-25 19:01:33] 2025-11-26 00:00:52,372 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,377 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,430 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,498 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:52,601 | INFO     | all payload control threads have been joined
[2025-11-25 19:01:33] 2025-11-26 00:00:52,985 | INFO     | [data] control thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,147 | INFO     | [job] validate thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,184 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,265 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,317 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,318 | INFO     | [job] control thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,607 | INFO     | [payload] control thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,659 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:00:53,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:01:33] 2025-11-26 00:00:57,726 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:01:01,805 | INFO     | job.realtimelogging is not enabled
[2025-11-25 19:01:33] 2025-11-26 00:01:02,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:01:33] 2025-11-26 00:01:21,883 | INFO     | PID=5892 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 19:01:33] 2025-11-26 00:01:21,883 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:01:33] 2025-11-26 00:01:21,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:01:33] 2025-11-26 00:01:21,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:01:33] 2025-11-26 00:01:27,304 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:01:33] 2025-11-26 00:01:28,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447093282624)>', '<ExcThread(monitor, started 140446336530176)>']
[2025-11-25 19:01:33] 2025-11-26 00:01:28,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:01:33] 2025-11-26 00:01:28,919 | INFO     | [monitor] control thread has ended
[2025-11-25 19:01:33] 2025-11-26 00:01:33,133 | INFO     | all workflow threads have been joined
[2025-11-25 19:01:33] 2025-11-26 00:01:33,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:01:33] 2025-11-26 00:01:33,134 | INFO     | traces error code: 0
[2025-11-25 19:01:33] 2025-11-26 00:01:33,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:01:33] 2025-11-26 00:01:33,235 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:01:33] 2025-11-26 00:01:33,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:01:33] 2025-11-26 00:01:33,245 [wrapper] pilotpid: 5892
[2025-11-25 19:01:33] 2025-11-26 00:01:33,249 [wrapper] Pilot exit status: 0
[2025-11-25 19:01:33] 2025-11-26 00:01:33,267 [wrapper] pandaids: 6895674357
[2025-11-25 19:01:33] 2025-11-26 00:01:33,319 [wrapper] cleanup supervisor_pilot  5436 5893
[2025-11-25 19:01:33] 2025-11-26 00:01:33,324 [wrapper] Test setup, not cleaning
[2025-11-25 19:01:33] 2025-11-26 00:01:33,329 [wrapper] apfmon messages muted
[2025-11-25 19:01:33] 2025-11-26 00:01:33,333 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:01:33] 2025-11-26 00:01:33,338 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:01:33]  *** Error codes and diagnostics ***
[2025-11-25 19:01:33]     "exeErrorCode": 0,
[2025-11-25 19:01:33]     "exeErrorDiag": "",
[2025-11-25 19:01:33]     "pilotErrorCode": 0,
[2025-11-25 19:01:33]     "pilotErrorDiag": "",
[2025-11-25 19:01:33]  *** Listing of results directory ***
[2025-11-25 19:01:33] total 1313376
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-25 19:01:33] -rwx------ 1 boincer umatlas     36292 Nov 24 08:41 runpilot2-wrapper.sh
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 08:41 queuedata.json
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas       100 Nov 25 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:01:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 08:00 run_atlas
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas       105 Nov 25 08:00 job.xml
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas 410172820 Nov 25 08:00 EVNT.47483658._001355.pool.root.1
[2025-11-25 19:01:33] drwxrwx--x 2 boincer umatlas      4096 Nov 25 08:00 shared
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 08:00 input.tar.gz
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:00 start_atlas.sh
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas         0 Nov 25 08:00 boinc_lockfile
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 08:00 pandaJob.out
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas        57 Nov 25 08:00 setup.sh.local
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas    991909 Nov 25 08:00 agis_schedconf.cvmfs.json
[2025-11-25 19:01:33] drwx------ 5 boincer umatlas      4096 Nov 25 08:00 pilot3
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas       533 Nov 25 18:50 boinc_task_state.xml
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas 916051968 Nov 25 19:00 HITS.47556149._003417.pool.root.1
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas      5911 Nov 25 19:00 init_data.xml
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas      1061 Nov 25 19:00 memory_monitor_summary.json
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas   1516240 Nov 25 19:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas   1909538 Nov 25 19:00 log.47556149._003417.job.log.tgz.1
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas        95 Nov 25 19:00 pilot_heartbeat.json
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas      8655 Nov 25 19:00 heartbeat.json
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 19:00 boinc_mmap_file
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas        29 Nov 25 19:00 wrapper_checkpoint.txt
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas      4817 Nov 25 19:01 pilotlog.txt
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas   5464688 Nov 25 19:01 log.47556149._003417.job.log.1
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas       353 Nov 25 19:01 output.list
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas       620 Nov 25 19:01 runtime_log
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas   7393280 Nov 25 19:01 result.tar.gz
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 19:01 runtime_log.err
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas       667 Nov 25 19:01 RJkNDm4zlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCiLKDmXQ3Csn.diag
[2025-11-25 19:01:33] -rw-r--r-- 1 boincer umatlas     21265 Nov 25 19:01 stderr.txt
[2025-11-25 19:01:33] HITS file was successfully produced:
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas 916051968 Nov 25 19:00 shared/HITS.pool.root.1
[2025-11-25 19:01:33]  *** Contents of shared directory: ***
[2025-11-25 19:01:33] total 1302968
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas 410172820 Nov 25 08:00 ATLAS.root_0
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 08:00 input.tar.gz
[2025-11-25 19:01:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 08:00 start_atlas.sh
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas 916051968 Nov 25 19:00 HITS.pool.root.1
[2025-11-25 19:01:33] -rw------- 1 boincer umatlas   7393280 Nov 25 19:01 result.tar.gz
19:01:35 (2087): run_atlas exited; CPU time 305422.915665
19:01:35 (2087): called boinc_finish(0)

</stderr_txt>
]]>

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