Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:46:29 (4042370): wrapper (7.7.26015): starting
07:46:29 (4042370): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 07:46:29] Arguments: --nthreads 8
[2025-11-25 07:46:29] Threads: 8
[2025-11-25 07:46:29] Checking for CVMFS
[2025-11-25 07:46:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:46:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:46:33] 2.13.3.0 7385 28565 207440 153283 1 528 30461163 32503808 69803 16776704 0 402811203 99.662 348148898 49716 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 07:46:33] CVMFS is ok
[2025-11-25 07:46:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:46:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:46:33] Further information can be found at the LHC@home message board.
[2025-11-25 07:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:46:33] Checking for apptainer binary...
[2025-11-25 07:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:46:33] Running /usr/bin/apptainer --version
[2025-11-25 07:46:35] apptainer version 1.4.4-1.el9
[2025-11-25 07:46:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:46:37] c8-7-1.aglt2.org
[2025-11-25 07:46:37] apptainer works
[2025-11-25 07:46:37] Set ATHENA_PROC_NUMBER=8
[2025-11-25 07:46:37] Set ATHENA_CORE_NUMBER=8
[2025-11-25 07:46:37] Starting ATLAS job with PandaID=6895375868
[2025-11-25 07:46:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:38:45]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:38:45] 2025-11-25 22:37:06,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:38:45] 2025-11-25 22:37:08,131 | INFO     | time since job start (35351s) is within the limit (172800.0s)
[2025-11-25 17:38:45] 2025-11-25 22:37:08,820 | INFO     | monitor loop #2126: job 0:6895375868 is in state 'finished'
[2025-11-25 17:38:45] 2025-11-25 22:37:08,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:38:45] 2025-11-25 22:37:10,138 | INFO     | time since job start (35353s) is within the limit (172800.0s)
[2025-11-25 17:38:45] 2025-11-25 22:37:11,343 | INFO     | monitor loop #2127: job 0:6895375868 is in state 'finished'
[2025-11-25 17:38:45] 2025-11-25 22:37:11,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:38:45] 2025-11-25 22:37:12,272 | INFO     | PID=4050975 has CPU usage=16.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 17:38:45] 2025-11-25 22:37:12,272 | INFO     | .. there are 88 such processes running
[2025-11-25 17:38:45] 2025-11-25 22:37:13,275 | INFO     | time since job start (35356s) is within the limit (172800.0s)
[2025-11-25 17:38:45] 2025-11-25 22:37:13,867 | INFO     | monitor loop #2128: job 0:6895375868 is in state 'finished'
[2025-11-25 17:38:45] 2025-11-25 22:37:13,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:38:45] 2025-11-25 22:37:15,282 | INFO     | time since job start (35358s) is within the limit (172800.0s)
[2025-11-25 17:38:45] 2025-11-25 22:37:16,371 | INFO     | monitor loop #2129: job 0:6895375868 is in state 'finished'
[2025-11-25 17:38:45] 2025-11-25 22:37:16,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:38:45] 2025-11-25 22:37:16,935 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 17:38:45] 2025-11-25 22:37:16,943 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.3876562500004
[2025-11-25 17:38:45] 2025-11-25 22:37:16,972 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895375868/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:38:45] 2025-11-25 22:37:16,973 | INFO     | extracted standard info from prmon json
[2025-11-25 17:38:45] 2025-11-25 22:37:16,973 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:38:45] 2025-11-25 22:37:16,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:38:45] 2025-11-25 22:37:16,981 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:38:45] 2025-11-25 22:37:16,981 | INFO     | sum of square deviations: 59568111966.87699
[2025-11-25 17:38:45] 2025-11-25 22:37:16,986 | INFO     | sum of deviations: 645781458429.482
[2025-11-25 17:38:45] 2025-11-25 22:37:16,986 | INFO     | mean x: 1764092596.0606587
[2025-11-25 17:38:45] 2025-11-25 22:37:16,986 | INFO     | mean y: 2766846.157712305
[2025-11-25 17:38:45] 2025-11-25 22:37:16,986 | INFO     | intersect: -19121866315.325882
[2025-11-25 17:38:45] 2025-11-25 22:37:16,986 | INFO     | chi2: 20.38736305088623
[2025-11-25 17:38:45] 2025-11-25 22:37:16,987 | INFO     | sum of square deviations: 58033144256.20286
[2025-11-25 17:38:45] 2025-11-25 22:37:16,991 | INFO     | sum of deviations: 827547149171.4618
[2025-11-25 17:38:45] 2025-11-25 22:37:16,992 | INFO     | mean x: 1764092443.56993
[2025-11-25 17:38:45] 2025-11-25 22:37:16,992 | INFO     | mean y: 2784908.0384615385
[2025-11-25 17:38:45] 2025-11-25 22:37:16,992 | INFO     | intersect: -25153006515.32864
[2025-11-25 17:38:45] 2025-11-25 22:37:16,992 | INFO     | chi2: 17.211127650459705
[2025-11-25 17:38:45] 2025-11-25 22:37:16,992 | INFO     | current chi2=17.211127650459705 (change=15.57943218305741 %)
[2025-11-25 17:38:45] 2025-11-25 22:37:16,993 | INFO     | right removable region: 571
[2025-11-25 17:38:45] 2025-11-25 22:37:16,995 | INFO     | sum of square deviations: 58032770936.20291
[2025-11-25 17:38:45] 2025-11-25 22:37:17,012 | INFO     | sum of deviations: 412908865481.4376
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | mean x: 1764092748.56993
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | mean y: 2789973.1765734265
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | intersect: -12548903210.952139
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | chi2: 15.656862028792762
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | current chi2=15.656862028792762 (change=23.203103855492653 %)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | left removable region: 10
[2025-11-25 17:38:45] 2025-11-25 22:37:17,013 | INFO     | sum of square deviations: 54748791332.363205
[2025-11-25 17:38:45] 2025-11-25 22:37:17,017 | INFO     | sum of deviations: 437626818941.7268
[2025-11-25 17:38:45] 2025-11-25 22:37:17,018 | INFO     | mean x: 1764092718.090909
[2025-11-25 17:38:45] 2025-11-25 22:37:17,018 | INFO     | mean y: 2833736.260249554
[2025-11-25 17:38:45] 2025-11-25 22:37:17,018 | INFO     | intersect: -14098195085.54014
[2025-11-25 17:38:45] 2025-11-25 22:37:17,018 | INFO     | chi2: 8.115696296948563
[2025-11-25 17:38:45] 2025-11-25 22:37:17,018 | INFO     | current memory leak: 7.99 B/s (using 561 data points, chi2=8.12)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | could have reported an average CPU frequency of 3795 MHz (23 samples)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | ..............................
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . Timing measurements:
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . get job = 0 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . initial setup = 8 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . payload setup = 51 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . stage-in = 0 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . payload execution = 35216 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . stage-out = 3 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | . log creation = 0 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,019 | INFO     | ..............................
[2025-11-25 17:38:45] 2025-11-25 22:37:17,292 | INFO     | time since job start (35360s) is within the limit (172800.0s)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | 
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | job summary report
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | --------------------------------------------------
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | PanDA job id: 6895375868
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | task id: 47556137
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | errors: (none)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | pilot state: finished 
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | transexitcode: 0
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | exeerrorcode: 0
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | exeerrordiag: 
[2025-11-25 17:38:45] 2025-11-25 22:37:17,337 | INFO     | exitcode: 0
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | exitmsg: OK
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | cpuconsumptiontime: 137567 s
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | nevents: 1000
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | neventsw: 0
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | pid: 4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | pgrp: 4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | corecount: 8
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | event service: False
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | sizes: {0: 2283436, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 32: 2284638, 34: 2284794, 35272: 2326035, 35276: 2335029, 35277: 2335085, 35292: 2335331}
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | --------------------------------------------------
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | 
[2025-11-25 17:38:45] 2025-11-25 22:37:17,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 17:38:45] 2025-11-25 22:37:17,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,371 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:38:45] 2025-11-25 22:37:17,371 | INFO     | job 6895375868 has completed (purged errors)
[2025-11-25 17:38:45] 2025-11-25 22:37:17,371 | INFO     | overall cleanup function is called
[2025-11-25 17:38:45] 2025-11-25 22:37:18,386 | INFO     | --- collectZombieJob: --- 10, [4060248]
[2025-11-25 17:38:45] 2025-11-25 22:37:18,386 | INFO     | zombie collector waiting for pid 4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:18,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:38:45] 2025-11-25 22:37:18,386 | INFO     | collected zombie processes
[2025-11-25 17:38:45] 2025-11-25 22:37:18,386 | INFO     | will attempt to kill all subprocesses of pid=4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:19,598 | INFO     | process IDs to be killed: [4060248] (in reverse order)
[2025-11-25 17:38:45] 2025-11-25 22:37:19,843 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:38:45] 2025-11-25 22:37:19,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:38:45] 2025-11-25 22:37:19,886 | INFO     | did not find any defunct processes belonging to 4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:19,970 | INFO     | did not find any defunct processes belonging to 4060248
[2025-11-25 17:38:45] 2025-11-25 22:37:19,986 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:38:45] 2025-11-25 22:37:19,986 | INFO     | ready for new job
[2025-11-25 17:38:45] 2025-11-25 22:37:19,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:38:45] 2025-11-25 22:37:19,988 | INFO     | ***************************************
[2025-11-25 17:38:45] 2025-11-25 22:37:19,988 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:38:45] 2025-11-25 22:37:19,989 | INFO     | ***************************************
[2025-11-25 17:38:45] 2025-11-25 22:37:19,989 | INFO     | 
[2025-11-25 17:38:45] 2025-11-25 22:37:19,997 | INFO     | architecture information:
[2025-11-25 17:38:45] 2025-11-25 22:37:20,002 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:38:45] 2025-11-25 22:37:20,052 | INFO     | cat /etc/os-release:
[2025-11-25 17:38:45] NAME="CentOS Linux"
[2025-11-25 17:38:45] VERSION="7 (Core)"
[2025-11-25 17:38:45] ID="centos"
[2025-11-25 17:38:45] ID_LIKE="rhel fedora"
[2025-11-25 17:38:45] VERSION_ID="7"
[2025-11-25 17:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:38:45] ANSI_COLOR="0;31"
[2025-11-25 17:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:38:45] HOME_URL="https://www.centos.org/"
[2025-11-25 17:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:38:45] 
[2025-11-25 17:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:38:45] 
[2025-11-25 17:38:45] 2025-11-25 22:37:20,052 | INFO     | ***************************************
[2025-11-25 17:38:45] 2025-11-25 22:37:20,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 17:38:45] 2025-11-25 22:37:20,620 | INFO     | sufficient remaining disk space (79784050688 B)
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | INFO     | update_server=False
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:38:45] 2025-11-25 22:37:20,621 | INFO     | aborting loop
[2025-11-25 17:38:45] 2025-11-25 22:37:20,832 | INFO     | all job control threads have been joined
[2025-11-25 17:38:45] 2025-11-25 22:37:20,942 | INFO     | all data control threads have been joined
[2025-11-25 17:38:45] 2025-11-25 22:37:21,528 | INFO     | all payload control threads have been joined
[2025-11-25 17:38:45] 2025-11-25 22:37:21,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:38:45] 2025-11-25 22:37:21,626 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:21,627 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:21,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:38:45] 2025-11-25 22:37:21,824 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:21,837 | INFO     | [job] control thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:21,938 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:21,947 | INFO     | [data] control thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:22,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:38:45] 2025-11-25 22:37:22,134 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:22,480 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:22,533 | INFO     | [payload] control thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:22,977 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:23,120 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:23,139 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:23,139 | INFO     | [job] validate thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:23,722 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:25,551 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:30,827 | INFO     | job.realtimelogging is not enabled
[2025-11-25 17:38:45] 2025-11-25 22:37:31,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:38:45] 2025-11-25 22:37:51,363 | INFO     | PID=4050975 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 17:38:45] 2025-11-25 22:37:51,364 | INFO     | .. there are 88 such processes running
[2025-11-25 17:38:45] 2025-11-25 22:37:51,364 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:38:45] 2025-11-25 22:37:51,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:38:45] 2025-11-25 22:37:51,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:38:45] 2025-11-25 22:37:58,144 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:38:45] 2025-11-25 22:37:59,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601552267072)>', '<ExcThread(monitor, started 140600762418944)>']
[2025-11-25 17:38:45] 2025-11-25 22:38:00,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:38:45] 2025-11-25 22:38:00,444 | INFO     | [monitor] control thread has ended
[2025-11-25 17:38:45] 2025-11-25 22:38:04,708 | INFO     | all workflow threads have been joined
[2025-11-25 17:38:45] 2025-11-25 22:38:04,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:38:45] 2025-11-25 22:38:04,708 | INFO     | traces error code: 0
[2025-11-25 17:38:45] 2025-11-25 22:38:04,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:38:45] 2025-11-25 22:38:04,839 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:38:45] 2025-11-25 22:38:04,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:38:45] 2025-11-25 22:38:05,032 [wrapper] pilotpid: 4050975
[2025-11-25 17:38:45] 2025-11-25 22:38:05,072 [wrapper] Pilot exit status: 0
[2025-11-25 17:38:45] 2025-11-25 22:38:05,168 [wrapper] pandaids: 6895375868
[2025-11-25 17:38:45] 2025-11-25 22:38:05,395 [wrapper] cleanup supervisor_pilot 1385849 4050976
[2025-11-25 17:38:45] 2025-11-25 22:38:05,416 [wrapper] Test setup, not cleaning
[2025-11-25 17:38:45] 2025-11-25 22:38:05,429 [wrapper] apfmon messages muted
[2025-11-25 17:38:45] 2025-11-25 22:38:05,447 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:38:45] 2025-11-25 22:38:05,469 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:38:45]  *** Error codes and diagnostics ***
[2025-11-25 17:38:45]     "exeErrorCode": 0,
[2025-11-25 17:38:45]     "exeErrorDiag": "",
[2025-11-25 17:38:45]     "pilotErrorCode": 0,
[2025-11-25 17:38:45]     "pilotErrorDiag": "",
[2025-11-25 17:38:45]  *** Listing of results directory ***
[2025-11-25 17:38:45] total 1326156
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 19:08 pilot3.tar.gz
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:08 queuedata.json
[2025-11-25 17:38:45] -rwx------. 1 boincer umatlas     36292 Nov 23 19:09 runpilot2-wrapper.sh
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas       100 Nov 25 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 07:46 run_atlas
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas       105 Nov 25 07:46 job.xml
[2025-11-25 17:38:45] -rw-r--r--. 2 boincer umatlas 410362363 Nov 25 07:46 EVNT.47483658._000957.pool.root.1
[2025-11-25 17:38:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 07:46 start_atlas.sh
[2025-11-25 17:38:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 07:46 shared
[2025-11-25 17:38:45] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 07:46 input.tar.gz
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas         0 Nov 25 07:46 boinc_lockfile
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 07:46 pandaJob.out
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas        57 Nov 25 07:46 setup.sh.local
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas    991909 Nov 25 07:47 agis_schedconf.cvmfs.json
[2025-11-25 17:38:45] drwx------. 5 boincer umatlas      4096 Nov 25 07:47 pilot3
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas       533 Nov 25 17:16 boinc_task_state.xml
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas 931103559 Nov 25 17:36 HITS.47556137._009439.pool.root.1
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas      1075 Nov 25 17:36 memory_monitor_summary.json
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas      7171 Nov 25 17:36 init_data.xml
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas   1516240 Nov 25 17:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas   1813052 Nov 25 17:37 log.47556137._009439.job.log.tgz.1
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas        95 Nov 25 17:37 pilot_heartbeat.json
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas      8631 Nov 25 17:37 heartbeat.json
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas      4896 Nov 25 17:38 pilotlog.txt
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas   4483159 Nov 25 17:38 log.47556137._009439.job.log.1
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas       353 Nov 25 17:38 output.list
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas       620 Nov 25 17:38 runtime_log
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas   6318080 Nov 25 17:38 result.tar.gz
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 17:38 runtime_log.err
[2025-11-25 17:38:45] -rw-------. 1 boincer umatlas       663 Nov 25 17:38 OC2LDmuJZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrqIKDmNnbesm.diag
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas        29 Nov 25 17:38 wrapper_checkpoint.txt
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 17:38 boinc_mmap_file
[2025-11-25 17:38:45] -rw-r--r--. 1 boincer umatlas     21858 Nov 25 17:38 stderr.txt
[2025-11-25 17:38:46] HITS file was successfully produced:
[2025-11-25 17:38:46] -rw-------. 1 boincer umatlas 931103559 Nov 25 17:36 shared/HITS.pool.root.1
[2025-11-25 17:38:46]  *** Contents of shared directory: ***
[2025-11-25 17:38:46] total 1316804
[2025-11-25 17:38:46] -rw-r--r--. 2 boincer umatlas 410362363 Nov 25 07:46 ATLAS.root_0
[2025-11-25 17:38:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 07:46 start_atlas.sh
[2025-11-25 17:38:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 07:46 input.tar.gz
[2025-11-25 17:38:46] -rw-------. 1 boincer umatlas 931103559 Nov 25 17:36 HITS.pool.root.1
[2025-11-25 17:38:46] -rw-------. 1 boincer umatlas   6318080 Nov 25 17:38 result.tar.gz
17:38:47 (4042370): run_atlas exited; CPU time 138246.152131
17:38:47 (4042370): called boinc_finish(0)

</stderr_txt>
]]>

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