Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:20:21 (4628): wrapper (7.7.26015): starting
07:20:21 (4628): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 07:20:21] Arguments: --nthreads 12
[2025-11-25 07:20:21] Threads: 12
[2025-11-25 07:20:21] Checking for CVMFS
[2025-11-25 07:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:20:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:20:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:20:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:20:22] 2.11.2.0 2979 286248 94104 153281 2 82 15190507 20275201 1 130560 1 128097656 99.975 15986584 13850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 07:20:22] CVMFS is ok
[2025-11-25 07:20:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:20:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:20:22] Further information can be found at the LHC@home message board.
[2025-11-25 07:20:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:20:22] Checking for apptainer binary...
[2025-11-25 07:20:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:20:22] Running /usr/bin/apptainer --version
[2025-11-25 07:20:22] apptainer version 1.3.2-1.el7
[2025-11-25 07:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:20:23] c-205-21.aglt2.org
[2025-11-25 07:20:23] apptainer works
[2025-11-25 07:20:23] Set ATHENA_PROC_NUMBER=12
[2025-11-25 07:20:23] Set ATHENA_CORE_NUMBER=12
[2025-11-25 07:20:23] Starting ATLAS job with PandaID=6895674339
[2025-11-25 07:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:35:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:35:26] 2025-11-25 19:34:27,255 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:35:26] 2025-11-25 19:34:27,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:35:26] 2025-11-25 19:34:27,262 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:35:26] 2025-11-25 19:34:27,263 | INFO     | sum of square deviations: 23971843920.9132
[2025-11-25 14:35:26] 2025-11-25 19:34:27,266 | INFO     | sum of deviations: 323751535059.5518
[2025-11-25 14:35:26] 2025-11-25 19:34:27,267 | INFO     | mean x: 1764086230.7723005
[2025-11-25 14:35:26] 2025-11-25 19:34:27,267 | INFO     | mean y: 3409318.284037559
[2025-11-25 14:35:26] 2025-11-25 19:34:27,267 | INFO     | intersect: -23821442331.600815
[2025-11-25 14:35:26] 2025-11-25 19:34:27,267 | INFO     | chi2: 6.366938684166293
[2025-11-25 14:35:26] 2025-11-25 19:34:27,268 | INFO     | sum of square deviations: 23137659008.038094
[2025-11-25 14:35:26] 2025-11-25 19:34:27,272 | INFO     | sum of deviations: 468849751866.85516
[2025-11-25 14:35:26] 2025-11-25 19:34:27,272 | INFO     | mean x: 1764086078.2755344
[2025-11-25 14:35:26] 2025-11-25 19:34:27,272 | INFO     | mean y: 3435815.1995249405
[2025-11-25 14:35:26] 2025-11-25 19:34:27,272 | INFO     | intersect: -35743107073.34092
[2025-11-25 14:35:26] 2025-11-25 19:34:27,273 | INFO     | chi2: 3.8656685250281133
[2025-11-25 14:35:26] 2025-11-25 19:34:27,273 | INFO     | current chi2=3.8656685250281133 (change=39.28528737615295 %)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,273 | INFO     | sum of square deviations: 22323055857.653774
[2025-11-25 14:35:26] 2025-11-25 19:34:27,277 | INFO     | sum of deviations: 570450128910.3845
[2025-11-25 14:35:26] 2025-11-25 19:34:27,277 | INFO     | mean x: 1764085925.7788463
[2025-11-25 14:35:26] 2025-11-25 19:34:27,277 | INFO     | mean y: 3454825.8846153845
[2025-11-25 14:35:26] 2025-11-25 19:34:27,277 | INFO     | intersect: -45076531094.79326
[2025-11-25 14:35:26] 2025-11-25 19:34:27,278 | INFO     | chi2: 2.576882992873137
[2025-11-25 14:35:26] 2025-11-25 19:34:27,278 | INFO     | current chi2=2.576882992873137 (change=33.339266515242755 %)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,278 | INFO     | sum of square deviations: 21527776774.82242
[2025-11-25 14:35:26] 2025-11-25 19:34:27,282 | INFO     | sum of deviations: 592207588833.7593
[2025-11-25 14:35:26] 2025-11-25 19:34:27,282 | INFO     | mean x: 1764085773.2798054
[2025-11-25 14:35:26] 2025-11-25 19:34:27,282 | INFO     | mean y: 3458959.4890510947
[2025-11-25 14:35:26] 2025-11-25 19:34:27,282 | INFO     | intersect: -48524774736.79281
[2025-11-25 14:35:26] 2025-11-25 19:34:27,283 | INFO     | chi2: 2.3442841669485706
[2025-11-25 14:35:26] 2025-11-25 19:34:27,283 | INFO     | current chi2=2.3442841669485706 (change=9.026363500704647 %)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,283 | INFO     | right removable region: 410
[2025-11-25 14:35:26] 2025-11-25 19:34:27,284 | INFO     | sum of square deviations: 23137614111.586555
[2025-11-25 14:35:26] 2025-11-25 19:34:27,287 | INFO     | sum of deviations: 193759984272.85696
[2025-11-25 14:35:26] 2025-11-25 19:34:27,287 | INFO     | mean x: 1764086383.273159
[2025-11-25 14:35:26] 2025-11-25 19:34:27,288 | INFO     | mean y: 3432995.783847981
[2025-11-25 14:35:26] 2025-11-25 19:34:27,288 | INFO     | intersect: -14769453622.106524
[2025-11-25 14:35:26] 2025-11-25 19:34:27,288 | INFO     | chi2: 4.205377239627632
[2025-11-25 14:35:26] 2025-11-25 19:34:27,288 | INFO     | current chi2=4.205377239627632 (change=33.949776364490035 %)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,289 | INFO     | sum of square deviations: 22322940506.20911
[2025-11-25 14:35:26] 2025-11-25 19:34:27,292 | INFO     | sum of deviations: 161356860090.8414
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | mean x: 1764086535.7764423
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | mean y: 3439055.514423077
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | intersect: -12747903638.887419
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | chi2: 4.148457952272338
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | current chi2=4.148457952272338 (change=1.3534882630489984 %)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,293 | INFO     | left removable region: 20
[2025-11-25 14:35:26] 2025-11-25 19:34:27,294 | INFO     | sum of square deviations: 18393571547.907745
[2025-11-25 14:35:26] 2025-11-25 19:34:27,297 | INFO     | sum of deviations: 376874745497.7385
[2025-11-25 14:35:26] 2025-11-25 19:34:27,297 | INFO     | mean x: 1764086352.7846153
[2025-11-25 14:35:26] 2025-11-25 19:34:27,297 | INFO     | mean y: 3501170.0564102563
[2025-11-25 14:35:26] 2025-11-25 19:34:27,298 | INFO     | intersect: -36141713668.18748
[2025-11-25 14:35:26] 2025-11-25 19:34:27,298 | INFO     | chi2: 0.07209943358983584
[2025-11-25 14:35:26] 2025-11-25 19:34:27,298 | INFO     | current memory leak: 20.49 B/s (using 390 data points, chi2=0.07)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | could have reported an average CPU frequency of 2360 MHz (18 samples)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | ..............................
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . Timing measurements:
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . get job = 0 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . initial setup = 2 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . payload setup = 7 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . stage-in = 0 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . payload execution = 25989 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,299 | INFO     | . stage-out = 3 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,300 | INFO     | . log creation = 0 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,300 | INFO     | ..............................
[2025-11-25 14:35:26] 2025-11-25 19:34:27,383 | INFO     | 
[2025-11-25 14:35:26] 2025-11-25 19:34:27,383 | INFO     | job summary report
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | --------------------------------------------------
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | PanDA job id: 6895674339
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | task id: 47556149
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | errors: (none)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:35:26] 2025-11-25 19:34:27,384 | INFO     | pilot state: finished 
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | transexitcode: 0
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | exeerrorcode: 0
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | exeerrordiag: 
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | exitcode: 0
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | exitmsg: OK
[2025-11-25 14:35:26] 2025-11-25 19:34:27,385 | INFO     | cpuconsumptiontime: 295457 s
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | nevents: 1000
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | neventsw: 0
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | pid: 14733
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | pgrp: 14733
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | corecount: 12
[2025-11-25 14:35:26] 2025-11-25 19:34:27,386 | INFO     | event service: False
[2025-11-25 14:35:26] 2025-11-25 19:34:27,387 | INFO     | sizes: {0: 2284144, 1: 2284343, 6: 2284605, 11: 2284633, 26001: 2321954, 26005: 2330948, 26006: 2331132, 26013: 2331378}
[2025-11-25 14:35:26] 2025-11-25 19:34:27,387 | INFO     | --------------------------------------------------
[2025-11-25 14:35:26] 2025-11-25 19:34:27,387 | INFO     | 
[2025-11-25 14:35:26] 2025-11-25 19:34:27,387 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 14:35:26] 2025-11-25 19:34:27,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:35:26] 2025-11-25 19:34:27,415 | INFO     | job 6895674339 has completed (purged errors)
[2025-11-25 14:35:26] 2025-11-25 19:34:27,416 | INFO     | overall cleanup function is called
[2025-11-25 14:35:26] 2025-11-25 19:34:28,432 | INFO     | --- collectZombieJob: --- 10, [14733]
[2025-11-25 14:35:26] 2025-11-25 19:34:28,432 | INFO     | zombie collector waiting for pid 14733
[2025-11-25 14:35:26] 2025-11-25 19:34:28,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:35:26] 2025-11-25 19:34:28,433 | INFO     | collected zombie processes
[2025-11-25 14:35:26] 2025-11-25 19:34:28,433 | INFO     | will attempt to kill all subprocesses of pid=14733
[2025-11-25 14:35:26] 2025-11-25 19:34:28,523 | INFO     | process IDs to be killed: [14733] (in reverse order)
[2025-11-25 14:35:26] 2025-11-25 19:34:28,574 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:35:26] 2025-11-25 19:34:28,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:35:26] 2025-11-25 19:34:28,578 | INFO     | did not find any defunct processes belonging to 14733
[2025-11-25 14:35:26] 2025-11-25 19:34:28,581 | INFO     | did not find any defunct processes belonging to 14733
[2025-11-25 14:35:26] 2025-11-25 19:34:28,583 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:35:26] 2025-11-25 19:34:28,583 | INFO     | ready for new job
[2025-11-25 14:35:26] 2025-11-25 19:34:28,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:35:26] 2025-11-25 19:34:28,585 | INFO     | ***************************************
[2025-11-25 14:35:26] 2025-11-25 19:34:28,586 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:35:26] 2025-11-25 19:34:28,586 | INFO     | ***************************************
[2025-11-25 14:35:26] 2025-11-25 19:34:28,586 | INFO     | 
[2025-11-25 14:35:26] 2025-11-25 19:34:28,586 | INFO     | architecture information:
[2025-11-25 14:35:26] 2025-11-25 19:34:28,587 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:35:26] 2025-11-25 19:34:28,603 | INFO     | cat /etc/os-release:
[2025-11-25 14:35:26] NAME="CentOS Linux"
[2025-11-25 14:35:26] VERSION="7 (Core)"
[2025-11-25 14:35:26] ID="centos"
[2025-11-25 14:35:26] ID_LIKE="rhel fedora"
[2025-11-25 14:35:26] VERSION_ID="7"
[2025-11-25 14:35:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:35:26] ANSI_COLOR="0;31"
[2025-11-25 14:35:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:35:26] HOME_URL="https://www.centos.org/"
[2025-11-25 14:35:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:35:26] 
[2025-11-25 14:35:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:35:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:35:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:35:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:35:26] 
[2025-11-25 14:35:26] 2025-11-25 19:34:28,603 | INFO     | ***************************************
[2025-11-25 14:35:26] 2025-11-25 19:34:29,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 14:35:26] 2025-11-25 19:34:29,125 | INFO     | sufficient remaining disk space (28239200256 B)
[2025-11-25 14:35:26] 2025-11-25 19:34:29,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:35:26] 2025-11-25 19:34:29,126 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:35:26] 2025-11-25 19:34:29,126 | INFO     | update_server=False
[2025-11-25 14:35:26] 2025-11-25 19:34:29,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:35:26] 2025-11-25 19:34:29,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:35:26] 2025-11-25 19:34:29,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:35:26] 2025-11-25 19:34:29,127 | INFO     | aborting loop
[2025-11-25 14:35:26] 2025-11-25 19:34:29,588 | INFO     | all job control threads have been joined
[2025-11-25 14:35:26] 2025-11-25 19:34:29,605 | INFO     | all data control threads have been joined
[2025-11-25 14:35:26] 2025-11-25 19:34:29,867 | INFO     | all payload control threads have been joined
[2025-11-25 14:35:26] 2025-11-25 19:34:29,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:35:26] 2025-11-25 19:34:30,132 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,133 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,133 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,209 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,219 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,593 | INFO     | [job] control thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,610 | INFO     | [data] control thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,706 | INFO     | [job] validate thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,838 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,840 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,873 | INFO     | [payload] control thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:30,890 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:31,351 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:31,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:35:26] 2025-11-25 19:34:31,922 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:35,565 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:39,471 | INFO     | job.realtimelogging is not enabled
[2025-11-25 14:35:26] 2025-11-25 19:34:40,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:35:26] 2025-11-25 19:34:58,754 | INFO     | PID=8323 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 14:35:26] 2025-11-25 19:34:58,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:35:26] 2025-11-25 19:34:58,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:35:26] 2025-11-25 19:34:58,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:35:26] 2025-11-25 19:35:20,531 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:35:26] 2025-11-25 19:35:21,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714880042816)>', '<ExcThread(monitor, started 139714002675456)>']
[2025-11-25 14:35:26] 2025-11-25 19:35:21,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:35:26] 2025-11-25 19:35:21,871 | INFO     | [monitor] control thread has ended
[2025-11-25 14:35:26] 2025-11-25 19:35:26,463 | INFO     | all workflow threads have been joined
[2025-11-25 14:35:26] 2025-11-25 19:35:26,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:35:26] 2025-11-25 19:35:26,464 | INFO     | traces error code: 0
[2025-11-25 14:35:26] 2025-11-25 19:35:26,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:35:26] 2025-11-25 19:35:26,564 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:35:26] 2025-11-25 19:35:26,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:35:26] 2025-11-25 19:35:26,572 [wrapper] pilotpid: 8323
[2025-11-25 14:35:26] 2025-11-25 19:35:26,576 [wrapper] Pilot exit status: 0
[2025-11-25 14:35:26] 2025-11-25 19:35:26,589 [wrapper] pandaids: 6895674339
[2025-11-25 14:35:26] 2025-11-25 19:35:26,635 [wrapper] cleanup supervisor_pilot 11123 8324
[2025-11-25 14:35:26] 2025-11-25 19:35:26,640 [wrapper] Test setup, not cleaning
[2025-11-25 14:35:26] 2025-11-25 19:35:26,644 [wrapper] apfmon messages muted
[2025-11-25 14:35:26] 2025-11-25 19:35:26,648 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:35:26] 2025-11-25 19:35:26,652 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:35:26]  *** Error codes and diagnostics ***
[2025-11-25 14:35:26]     "exeErrorCode": 0,
[2025-11-25 14:35:26]     "exeErrorDiag": "",
[2025-11-25 14:35:26]     "pilotErrorCode": 0,
[2025-11-25 14:35:26]     "pilotErrorDiag": "",
[2025-11-25 14:35:26]  *** Listing of results directory ***
[2025-11-25 14:35:26] total 1312160
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 08:31 queuedata.json
[2025-11-25 14:35:26] -rwx------ 1 boincer umatlas     36292 Nov 24 08:33 runpilot2-wrapper.sh
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas       100 Nov 25 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:35:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 07:20 run_atlas
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas       105 Nov 25 07:20 job.xml
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas 411607341 Nov 25 07:20 EVNT.47483658._001353.pool.root.1
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 07:20 start_atlas.sh
[2025-11-25 14:35:26] drwxrwx--x 2 boincer umatlas      4096 Nov 25 07:20 shared
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 07:20 input.tar.gz
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas         0 Nov 25 07:20 boinc_lockfile
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 07:20 pandaJob.out
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas        57 Nov 25 07:20 setup.sh.local
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas    991894 Nov 25 07:20 agis_schedconf.cvmfs.json
[2025-11-25 14:35:26] drwx------ 5 boincer umatlas      4096 Nov 25 07:20 pilot3
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas       532 Nov 25 14:19 boinc_task_state.xml
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 14:30 init_data.xml
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas 916451926 Nov 25 14:33 HITS.47556149._003399.pool.root.1
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas      1061 Nov 25 14:34 memory_monitor_summary.json
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas   1516240 Nov 25 14:34 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas   2190992 Nov 25 14:34 log.47556149._003399.job.log.tgz.1
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas      8666 Nov 25 14:34 heartbeat.json
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas        95 Nov 25 14:34 pilot_heartbeat.json
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 14:35 boinc_mmap_file
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas        29 Nov 25 14:35 wrapper_checkpoint.txt
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas      4817 Nov 25 14:35 pilotlog.txt
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas   3643915 Nov 25 14:35 log.47556149._003399.job.log.1
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas       353 Nov 25 14:35 output.list
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas       620 Nov 25 14:35 runtime_log
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas   5857280 Nov 25 14:35 result.tar.gz
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 14:35 runtime_log.err
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas       670 Nov 25 14:35 6hNNDmwrlh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt4IKDmE6pxJm.diag
[2025-11-25 14:35:26] -rw-r--r-- 1 boincer umatlas     21098 Nov 25 14:35 stderr.txt
[2025-11-25 14:35:26] HITS file was successfully produced:
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas 916451926 Nov 25 14:33 shared/HITS.pool.root.1
[2025-11-25 14:35:26]  *** Contents of shared directory: ***
[2025-11-25 14:35:26] total 1303260
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas 411607341 Nov 25 07:20 ATLAS.root_0
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 07:20 start_atlas.sh
[2025-11-25 14:35:26] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 07:20 input.tar.gz
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas 916451926 Nov 25 14:33 HITS.pool.root.1
[2025-11-25 14:35:26] -rw------- 1 boincer umatlas   5857280 Nov 25 14:35 result.tar.gz
14:35:28 (4628): run_atlas exited; CPU time 288808.756668
14:35:28 (4628): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN