Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
06:45:47 (3543813): wrapper (7.7.26015): starting
06:45:47 (3543813): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 06:45:47] Arguments: --nthreads 4
[2025-11-25 06:45:47] Threads: 4
[2025-11-25 06:45:47] Checking for CVMFS
[2025-11-25 06:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:45:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:45:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:45:48] 2.13.2.0 774864 2825 59716 153284 2 81 2779035 4096001 5100 130560 0 8335376 99.930 510449 1482 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 06:45:48] CVMFS is ok
[2025-11-25 06:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:45:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 06:45:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 06:45:48] Further information can be found at the LHC@home message board.
[2025-11-25 06:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:45:48] Checking for apptainer binary...
[2025-11-25 06:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:45:48] Running /usr/bin/apptainer --version
[2025-11-25 06:45:48] apptainer version 1.4.3
[2025-11-25 06:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:45:48] msi670e
[2025-11-25 06:45:48] apptainer works
[2025-11-25 06:45:48] Set ATHENA_PROC_NUMBER=4
[2025-11-25 06:45:48] Set ATHENA_CORE_NUMBER=4
[2025-11-25 06:45:48] Starting ATLAS job with PandaID=6895356336
[2025-11-25 06:45:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:22:39]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:22:39] 2025-11-25 20:21:46,460 | INFO     | time since job start (23752s) is within the limit (172800.0s)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,191 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 13:22:39] 2025-11-25 20:21:47,194 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4821.76475
[2025-11-25 13:22:39] 2025-11-25 20:21:47,196 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6895356336/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,197 | INFO     | extracted standard info from prmon json
[2025-11-25 13:22:39] 2025-11-25 20:21:47,197 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:22:39] 2025-11-25 20:21:47,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:22:39] 2025-11-25 20:21:47,200 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:22:39] 2025-11-25 20:21:47,200 | INFO     | sum of square deviations: 18252584090.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,201 | INFO     | sum of deviations: 87266526678.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,201 | INFO     | mean x: 1764090207.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,201 | INFO     | mean y: 2254802.7403598973
[2025-11-25 13:22:39] 2025-11-25 20:21:47,202 | INFO     | intersect: -8431949601.002454
[2025-11-25 13:22:39] 2025-11-25 20:21:47,202 | INFO     | chi2: 2.715366501563323
[2025-11-25 13:22:39] 2025-11-25 20:21:47,202 | INFO     | sum of square deviations: 17557761760.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,203 | INFO     | sum of deviations: 132706688524.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | mean x: 1764090054.5
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | mean y: 2264713.921875
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | intersect: -13331242859.017063
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | chi2: 1.5432475080860846
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | current chi2=1.5432475080860846 (change=43.16614323710674 %)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,204 | INFO     | sum of square deviations: 16880800230.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | sum of deviations: 129387966566.00002
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | mean x: 1764089902.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | mean y: 2263966.3614775725
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | intersect: -13519133251.156229
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | chi2: 1.5433823843014862
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | current chi2=1.5433823843014862 (change=-0.008739765636746026 %)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | right removable region: 378
[2025-11-25 13:22:39] 2025-11-25 20:21:47,206 | INFO     | sum of square deviations: 17557761760.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | sum of deviations: 31983018183.499947
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | mean x: 1764090359.5
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | mean y: 2266862.9401041665
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | intersect: -3211179977.064488
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | chi2: 1.2381433022994814
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | current chi2=1.2381433022994814 (change=54.40235041617244 %)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,208 | INFO     | sum of square deviations: 16880800230.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | sum of deviations: 30719145977.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | mean x: 1764090512.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | mean y: 2267146.54353562
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | intersect: -3207968933.2876554
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | chi2: 1.2380271975171042
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | current chi2=1.2380271975171042 (change=0.0093773299230868 %)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | left removable region: 20
[2025-11-25 13:22:39] 2025-11-25 20:21:47,210 | INFO     | sum of square deviations: 14227353269.5
[2025-11-25 13:22:39] 2025-11-25 20:21:47,211 | INFO     | sum of deviations: 75051897780.0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | mean x: 1764090481.5
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | mean y: 2276150.8826815644
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | intersect: -9303624671.587156
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | chi2: 0.03936249745381373
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | current memory leak: 5.28 B/s (using 358 data points, chi2=0.04)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | could have reported an average CPU frequency of 5001 MHz (17 samples)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | ..............................
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . Timing measurements:
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . get job = 0 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . initial setup = 2 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . payload setup = 2 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . stage-in = 0 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . payload execution = 23725 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . stage-out = 4 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | . log creation = 0 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,212 | INFO     | ..............................
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | 
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | job summary report
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | --------------------------------------------------
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | PanDA job id: 6895356336
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | task id: 47556149
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | errors: (none)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | pilot state: finished 
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | transexitcode: 0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | exeerrorcode: 0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | exeerrordiag: 
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | exitcode: 0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | exitmsg: OK
[2025-11-25 13:22:39] 2025-11-25 20:21:47,516 | INFO     | cpuconsumptiontime: 93929 s
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | nevents: 1000
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | neventsw: 0
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | pid: 3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | pgrp: 3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | corecount: 4
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | event service: False
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | sizes: {0: 2284220, 1: 2284220, 2: 2284510, 11: 2284538, 23732: 2320721, 23736: 2329729, 23737: 2329913, 23740: 2330223}
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | --------------------------------------------------
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | 
[2025-11-25 13:22:39] 2025-11-25 20:21:47,517 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-25 13:22:39] 2025-11-25 20:21:47,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | job 6895356336 has completed (purged errors)
[2025-11-25 13:22:39] 2025-11-25 20:21:47,529 | INFO     | overall cleanup function is called
[2025-11-25 13:22:39] 2025-11-25 20:21:47,571 | INFO     | PID=3547673 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:22:39] 2025-11-25 20:21:47,571 | INFO     | .. there are 7 such processes running
[2025-11-25 13:22:39] 2025-11-25 20:21:48,540 | INFO     | --- collectZombieJob: --- 10, [3554336]
[2025-11-25 13:22:39] 2025-11-25 20:21:48,540 | INFO     | zombie collector waiting for pid 3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:48,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:22:39] 2025-11-25 20:21:48,540 | INFO     | collected zombie processes
[2025-11-25 13:22:39] 2025-11-25 20:21:48,540 | INFO     | will attempt to kill all subprocesses of pid=3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:48,620 | INFO     | process IDs to be killed: [3554336] (in reverse order)
[2025-11-25 13:22:39] 2025-11-25 20:21:48,660 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:22:39] 2025-11-25 20:21:48,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:22:39] 2025-11-25 20:21:48,663 | INFO     | did not find any defunct processes belonging to 3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:48,665 | INFO     | did not find any defunct processes belonging to 3554336
[2025-11-25 13:22:39] 2025-11-25 20:21:48,666 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:22:39] 2025-11-25 20:21:48,666 | INFO     | ready for new job
[2025-11-25 13:22:39] 2025-11-25 20:21:48,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:22:39] 2025-11-25 20:21:48,668 | INFO     | ***************************************
[2025-11-25 13:22:39] 2025-11-25 20:21:48,668 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:22:39] 2025-11-25 20:21:48,668 | INFO     | ***************************************
[2025-11-25 13:22:39] 2025-11-25 20:21:48,668 | INFO     | 
[2025-11-25 13:22:39] 2025-11-25 20:21:48,669 | INFO     | architecture information:
[2025-11-25 13:22:39] 2025-11-25 20:21:48,669 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:22:39] 2025-11-25 20:21:48,679 | INFO     | cat /etc/os-release:
[2025-11-25 13:22:39] NAME="CentOS Linux"
[2025-11-25 13:22:39] VERSION="7 (Core)"
[2025-11-25 13:22:39] ID="centos"
[2025-11-25 13:22:39] ID_LIKE="rhel fedora"
[2025-11-25 13:22:39] VERSION_ID="7"
[2025-11-25 13:22:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:22:39] ANSI_COLOR="0;31"
[2025-11-25 13:22:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:22:39] HOME_URL="https://www.centos.org/"
[2025-11-25 13:22:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:22:39] 
[2025-11-25 13:22:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:22:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:22:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:22:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:22:39] 
[2025-11-25 13:22:39] 2025-11-25 20:21:48,679 | INFO     | ***************************************
[2025-11-25 13:22:39] 2025-11-25 20:21:49,182 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-25 13:22:39] 2025-11-25 20:21:49,191 | INFO     | sufficient remaining disk space (437694496768 B)
[2025-11-25 13:22:39] 2025-11-25 20:21:49,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | INFO     | update_server=False
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | INFO     | aborting loop
[2025-11-25 13:22:39] 2025-11-25 20:21:49,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:22:39] 2025-11-25 20:21:49,530 | INFO     | all data control threads have been joined
[2025-11-25 13:22:39] 2025-11-25 20:21:49,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:22:39] 2025-11-25 20:21:50,196 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,197 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,197 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,206 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,334 | INFO     | all payload control threads have been joined
[2025-11-25 13:22:39] 2025-11-25 20:21:50,355 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,535 | INFO     | [data] control thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,593 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:50,835 | INFO     | all job control threads have been joined
[2025-11-25 13:22:39] 2025-11-25 20:21:50,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:22:39] 2025-11-25 20:21:50,878 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,221 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,339 | INFO     | [payload] control thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,550 | INFO     | [job] validate thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,669 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,762 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:51,836 | INFO     | [job] control thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:21:54,843 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:22:39] 2025-11-25 20:22:19,720 | INFO     | PID=3547673 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:22:39] 2025-11-25 20:22:19,720 | INFO     | .. there are 7 such processes running
[2025-11-25 13:22:39] 2025-11-25 20:22:19,720 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:22:39] 2025-11-25 20:22:19,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:22:39] 2025-11-25 20:22:19,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:22:39] 2025-11-25 20:22:33,835 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:22:39] 2025-11-25 20:22:34,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138816420755264)>', '<ExcThread(monitor, started 138815935072000)>']
[2025-11-25 13:22:39] 2025-11-25 20:22:34,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:22:39] 2025-11-25 20:22:34,795 | INFO     | [monitor] control thread has ended
[2025-11-25 13:22:39] 2025-11-25 20:22:39,225 | INFO     | all workflow threads have been joined
[2025-11-25 13:22:39] 2025-11-25 20:22:39,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:22:39] 2025-11-25 20:22:39,225 | INFO     | traces error code: 0
[2025-11-25 13:22:39] 2025-11-25 20:22:39,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:22:39] 2025-11-25 20:22:39,281 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:22:39] 2025-11-25 20:22:39,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:22:39] 2025-11-25 20:22:39,284 [wrapper] pilotpid: 3547673
[2025-11-25 13:22:39] 2025-11-25 20:22:39,286 [wrapper] Pilot exit status: 0
[2025-11-25 13:22:39] 2025-11-25 20:22:39,291 [wrapper] pandaids: 6895356336
[2025-11-25 13:22:39] 2025-11-25 20:22:39,316 [wrapper] cleanup supervisor_pilot 3913596 3547674
[2025-11-25 13:22:39] 2025-11-25 20:22:39,317 [wrapper] Test setup, not cleaning
[2025-11-25 13:22:39] 2025-11-25 20:22:39,319 [wrapper] apfmon messages muted
[2025-11-25 13:22:39] 2025-11-25 20:22:39,320 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:22:39] 2025-11-25 20:22:39,322 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:22:39]  *** Error codes and diagnostics ***
[2025-11-25 13:22:39]     "exeErrorCode": 0,
[2025-11-25 13:22:39]     "exeErrorDiag": "",
[2025-11-25 13:22:39]     "pilotErrorCode": 0,
[2025-11-25 13:22:39]     "pilotErrorDiag": "",
[2025-11-25 13:22:39]  *** Listing of results directory ***
[2025-11-25 13:22:39] total 1300248
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc    576529 Nov 23 03:16 pilot3.tar.gz
[2025-11-25 13:22:39] -rwx------ 1 boinc boinc     36292 Nov 23 04:02 runpilot2-wrapper.sh
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc      5112 Nov 23 04:02 queuedata.json
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc       100 Nov 25 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:22:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 06:45 run_atlas
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc       105 Nov 25 06:45 job.xml
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc      9948 Nov 25 06:45 init_data.xml
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc 410645212 Nov 25 06:45 EVNT.47483658._001154.pool.root.1
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc     15847 Nov 25 06:45 start_atlas.sh
[2025-11-25 13:22:39] drwxrwx--x 2 boinc boinc      4096 Nov 25 06:45 shared
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc    590102 Nov 25 06:45 input.tar.gz
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc         0 Nov 25 06:45 boinc_lockfile
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc      2784 Nov 25 06:45 pandaJob.out
[2025-11-25 13:22:39] -rw------- 1 boinc boinc    991909 Nov 25 06:45 agis_schedconf.cvmfs.json
[2025-11-25 13:22:39] drwx------ 5 boinc boinc      4096 Nov 25 06:45 pilot3
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc       531 Nov 25 13:17 boinc_task_state.xml
[2025-11-25 13:22:39] -rw------- 1 boinc boinc 907541104 Nov 25 13:21 HITS.47556149._001409.pool.root.1
[2025-11-25 13:22:39] -rw------- 1 boinc boinc      1032 Nov 25 13:21 memory_monitor_summary.json
[2025-11-25 13:22:39] -rw------- 1 boinc boinc        95 Nov 25 13:21 pilot_heartbeat.json
[2025-11-25 13:22:39] -rw------- 1 boinc boinc   1516240 Nov 25 13:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:22:39] -rw------- 1 boinc boinc   1227909 Nov 25 13:21 log.47556149._001409.job.log.tgz.1
[2025-11-25 13:22:39] -rw------- 1 boinc boinc      8541 Nov 25 13:21 heartbeat.json
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc      8192 Nov 25 13:22 boinc_mmap_file
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc        28 Nov 25 13:22 wrapper_checkpoint.txt
[2025-11-25 13:22:39] -rw------- 1 boinc boinc      4831 Nov 25 13:22 pilotlog.txt
[2025-11-25 13:22:39] -rw------- 1 boinc boinc   3446689 Nov 25 13:22 log.47556149._001409.job.log.1
[2025-11-25 13:22:39] -rw------- 1 boinc boinc       353 Nov 25 13:22 output.list
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc       620 Nov 25 13:22 runtime_log
[2025-11-25 13:22:39] -rw------- 1 boinc boinc   4689920 Nov 25 13:22 result.tar.gz
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc      8920 Nov 25 13:22 runtime_log.err
[2025-11-25 13:22:39] -rw------- 1 boinc boinc       660 Nov 25 13:22 d57NDm71Mh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgoKKDmeNmjbn.diag
[2025-11-25 13:22:39] -rw-r--r-- 1 boinc boinc     21396 Nov 25 13:22 stderr.txt
[2025-11-25 13:22:39] HITS file was successfully produced:
[2025-11-25 13:22:39] -rw------- 1 boinc boinc 907541104 Nov 25 13:21 shared/HITS.pool.root.1
[2025-11-25 13:22:39]  *** Contents of shared directory: ***
[2025-11-25 13:22:39] total 1292480
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc 410645212 Nov 25 06:45 ATLAS.root_0
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc     15847 Nov 25 06:45 start_atlas.sh
[2025-11-25 13:22:39] -rw-r--r-- 2 boinc boinc    590102 Nov 25 06:45 input.tar.gz
[2025-11-25 13:22:39] -rw------- 1 boinc boinc 907541104 Nov 25 13:21 HITS.pool.root.1
[2025-11-25 13:22:39] -rw------- 1 boinc boinc   4689920 Nov 25 13:22 result.tar.gz
13:22:40 (3543813): run_atlas exited; CPU time 93905.283772
13:22:40 (3543813): called boinc_finish(0)

</stderr_txt>
]]>

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