Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:59 (21802): wrapper (7.7.26015): starting
08:00:59 (21802): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 08:00:59] Arguments: --nthreads 8
[2025-11-27 08:00:59] Threads: 8
[2025-11-27 08:00:59] Checking for CVMFS
[2025-11-27 08:01:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 08:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 08:01:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 08:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 08:01:00] 2.11.2.0 14372 286309 138840 153350 0 322 16349804 25165824 930 130560 10 137902250 99.882 82372689 2851 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 08:01:00] CVMFS is ok
[2025-11-27 08:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 08:01:00] Checking for apptainer binary...
[2025-11-27 08:01:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 08:01:00] Running /usr/bin/apptainer --version
[2025-11-27 08:01:00] apptainer version 1.3.2-1.el7
[2025-11-27 08:01:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 08:01:02] cg-vwn440.simple-grid.lan
[2025-11-27 08:01:02] apptainer works
[2025-11-27 08:01:02] Set ATHENA_PROC_NUMBER=8
[2025-11-27 08:01:02] Set ATHENA_CORE_NUMBER=8
[2025-11-27 08:01:02] Starting ATLAS job with PandaID=6895379527
[2025-11-27 08:01:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 05:59:02]  *** The last 200 lines of the pilot log: ***
[2025-11-28 05:59:02] 2025-11-28 04:58:14,742 | INFO     | monitor loop #5297: job 0:6895379527 is in state 'finished'
[2025-11-28 05:59:02] 2025-11-28 04:58:14,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:59:02] 2025-11-28 04:58:16,389 | INFO     | time since job start (79017s) is within the limit (172800.0s)
[2025-11-28 05:59:02] 2025-11-28 04:58:17,254 | INFO     | monitor loop #5298: job 0:6895379527 is in state 'finished'
[2025-11-28 05:59:02] 2025-11-28 04:58:17,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:59:02] 2025-11-28 04:58:18,396 | INFO     | time since job start (79019s) is within the limit (172800.0s)
[2025-11-28 05:59:02] 2025-11-28 04:58:19,560 | INFO     | PID=25529 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 05:59:02] 2025-11-28 04:58:19,561 | INFO     | .. there are 2 such processes running
[2025-11-28 05:59:02] 2025-11-28 04:58:19,759 | INFO     | monitor loop #5299: job 0:6895379527 is in state 'finished'
[2025-11-28 05:59:02] 2025-11-28 04:58:19,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:59:02] 2025-11-28 04:58:20,563 | INFO     | time since job start (79021s) is within the limit (172800.0s)
[2025-11-28 05:59:02] 2025-11-28 04:58:22,267 | INFO     | monitor loop #5300: job 0:6895379527 is in state 'finished'
[2025-11-28 05:59:02] 2025-11-28 04:58:22,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:59:02] 2025-11-28 04:58:22,573 | INFO     | time since job start (79023s) is within the limit (172800.0s)
[2025-11-28 05:59:02] 2025-11-28 04:58:23,788 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 05:59:02] 2025-11-28 04:58:23,789 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 05:59:02] 2025-11-28 04:58:23,790 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-6895379527/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 05:59:02] 2025-11-28 04:58:23,791 | INFO     | extracted standard info from prmon json
[2025-11-28 05:59:02] 2025-11-28 04:58:23,791 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 05:59:02] 2025-11-28 04:58:23,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 05:59:02] 2025-11-28 04:58:23,824 | INFO     | fitting pss+swap vs Time
[2025-11-28 05:59:02] 2025-11-28 04:58:23,837 | INFO     | sum of square deviations: 670304052160.9967
[2025-11-28 05:59:02] 2025-11-28 04:58:23,917 | INFO     | sum of deviations: 1291474267716.5347
[2025-11-28 05:59:02] 2025-11-28 04:58:23,917 | INFO     | mean x: 1764266322.9721577
[2025-11-28 05:59:02] 2025-11-28 04:58:23,918 | INFO     | mean y: 2838847.709203403
[2025-11-28 05:59:02] 2025-11-28 04:58:23,918 | INFO     | intersect: -3396371630.2399125
[2025-11-28 05:59:02] 2025-11-28 04:58:23,919 | INFO     | chi2: 20.24912287870038
[2025-11-28 05:59:02] 2025-11-28 04:58:23,921 | INFO     | sum of square deviations: 662558281001.2538
[2025-11-28 05:59:02] 2025-11-28 04:58:23,993 | INFO     | sum of deviations: 1719144920507.4976
[2025-11-28 05:59:02] 2025-11-28 04:58:23,993 | INFO     | mean x: 1764266170.4759316
[2025-11-28 05:59:02] 2025-11-28 04:58:23,993 | INFO     | mean y: 2847266.6288819876
[2025-11-28 05:59:02] 2025-11-28 04:58:23,993 | INFO     | intersect: -4574907343.597132
[2025-11-28 05:59:02] 2025-11-28 04:58:23,995 | INFO     | chi2: 16.88783146547757
[2025-11-28 05:59:02] 2025-11-28 04:58:23,995 | INFO     | current chi2=16.88783146547757 (change=16.599688951260596 %)
[2025-11-28 05:59:02] 2025-11-28 04:58:23,995 | INFO     | right removable region: 1287
[2025-11-28 05:59:02] 2025-11-28 04:58:23,997 | INFO     | sum of square deviations: 662557514231.2535
[2025-11-28 05:59:02] 2025-11-28 04:58:24,051 | INFO     | sum of deviations: 926187434615.3313
[2025-11-28 05:59:02] 2025-11-28 04:58:24,051 | INFO     | mean x: 1764266475.4759316
[2025-11-28 05:59:02] 2025-11-28 04:58:24,051 | INFO     | mean y: 2846032.4301242237
[2025-11-28 05:59:02] 2025-11-28 04:58:24,052 | INFO     | intersect: -2463417508.1695423
[2025-11-28 05:59:02] 2025-11-28 04:58:24,053 | INFO     | chi2: 17.902699961494573
[2025-11-28 05:59:02] 2025-11-28 04:58:24,053 | INFO     | current chi2=17.902699961494573 (change=11.58777558544997 %)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,053 | INFO     | left removable region: 10
[2025-11-28 05:59:02] 2025-11-28 04:58:24,055 | INFO     | sum of square deviations: 645726599973.6868
[2025-11-28 05:59:02] 2025-11-28 04:58:24,100 | INFO     | sum of deviations: 1353755669107.8398
[2025-11-28 05:59:02] 2025-11-28 04:58:24,100 | INFO     | mean x: 1764266444.9843383
[2025-11-28 05:59:02] 2025-11-28 04:58:24,100 | INFO     | mean y: 2858285.5418950664
[2025-11-28 05:59:02] 2025-11-28 04:58:24,100 | INFO     | intersect: -3695898590.5285797
[2025-11-28 05:59:02] 2025-11-28 04:58:24,102 | INFO     | chi2: 13.650626742349226
[2025-11-28 05:59:02] 2025-11-28 04:58:24,102 | INFO     | current memory leak: 2.10 B/s (using 1277 data points, chi2=13.65)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,103 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,103 | INFO     | ..............................
[2025-11-28 05:59:02] 2025-11-28 04:58:24,103 | INFO     | . Timing measurements:
[2025-11-28 05:59:02] 2025-11-28 04:58:24,103 | INFO     | . get job = 0 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . initial setup = 1 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . payload setup = 9 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . stage-in = 0 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . payload execution = 78874 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . stage-out = 6 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | . log creation = 2 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,104 | INFO     | ..............................
[2025-11-28 05:59:02] 2025-11-28 04:58:24,364 | INFO     | 
[2025-11-28 05:59:02] 2025-11-28 04:58:24,364 | INFO     | job summary report
[2025-11-28 05:59:02] 2025-11-28 04:58:24,364 | INFO     | --------------------------------------------------
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | PanDA job id: 6895379527
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | task id: 47556137
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | errors: (none)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | pilot state: finished 
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | transexitcode: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | exeerrorcode: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | exeerrordiag: 
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | exitcode: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | exitmsg: OK
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | cpuconsumptiontime: 311361 s
[2025-11-28 05:59:02] 2025-11-28 04:58:24,365 | INFO     | nevents: 1000
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | neventsw: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | pid: 31957
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | pgrp: 31957
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | corecount: 8
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | event service: False
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | sizes: {0: 2284144, 1: 2284343, 7: 2284605, 12: 2284633, 78885: 2341967, 78886: 2341966, 78892: 2351146, 78894: 2351202, 79007: 2351448}
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | --------------------------------------------------
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | 
[2025-11-28 05:59:02] 2025-11-28 04:58:24,366 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-11-28 05:59:02] 2025-11-28 04:58:24,583 | INFO     | time since job start (79025s) is within the limit (172800.0s)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 05:59:02] 2025-11-28 04:58:24,683 | INFO     | job 6895379527 has completed (purged errors)
[2025-11-28 05:59:02] 2025-11-28 04:58:24,683 | INFO     | overall cleanup function is called
[2025-11-28 05:59:02] 2025-11-28 04:58:25,706 | INFO     | --- collectZombieJob: --- 10, [31957]
[2025-11-28 05:59:02] 2025-11-28 04:58:25,706 | INFO     | zombie collector waiting for pid 31957
[2025-11-28 05:59:02] 2025-11-28 04:58:25,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 05:59:02] 2025-11-28 04:58:25,707 | INFO     | collected zombie processes
[2025-11-28 05:59:02] 2025-11-28 04:58:25,707 | INFO     | will attempt to kill all subprocesses of pid=31957
[2025-11-28 05:59:02] 2025-11-28 04:58:25,789 | INFO     | process IDs to be killed: [31957] (in reverse order)
[2025-11-28 05:59:02] 2025-11-28 04:58:26,894 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 05:59:02] 2025-11-28 04:58:26,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 05:59:02] 2025-11-28 04:58:26,897 | INFO     | did not find any defunct processes belonging to 31957
[2025-11-28 05:59:02] 2025-11-28 04:58:26,898 | INFO     | did not find any defunct processes belonging to 31957
[2025-11-28 05:59:02] 2025-11-28 04:58:26,992 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 05:59:02] 2025-11-28 04:58:26,993 | INFO     | ready for new job
[2025-11-28 05:59:02] 2025-11-28 04:58:26,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 05:59:02] 2025-11-28 04:58:26,998 | INFO     | ***************************************
[2025-11-28 05:59:02] 2025-11-28 04:58:26,998 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 05:59:02] 2025-11-28 04:58:26,998 | INFO     | ***************************************
[2025-11-28 05:59:02] 2025-11-28 04:58:26,998 | INFO     | 
[2025-11-28 05:59:02] 2025-11-28 04:58:26,999 | INFO     | pilot is running in a VM
[2025-11-28 05:59:02] 2025-11-28 04:58:26,999 | INFO     | architecture information:
[2025-11-28 05:59:02] 2025-11-28 04:58:27,017 | INFO     | executing command: cat /etc/os-release
[2025-11-28 05:59:02] 2025-11-28 04:58:27,409 | INFO     | cat /etc/os-release:
[2025-11-28 05:59:02] NAME="CentOS Linux"
[2025-11-28 05:59:02] VERSION="7 (Core)"
[2025-11-28 05:59:02] ID="centos"
[2025-11-28 05:59:02] ID_LIKE="rhel fedora"
[2025-11-28 05:59:02] VERSION_ID="7"
[2025-11-28 05:59:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 05:59:02] ANSI_COLOR="0;31"
[2025-11-28 05:59:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 05:59:02] HOME_URL="https://www.centos.org/"
[2025-11-28 05:59:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 05:59:02] 
[2025-11-28 05:59:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 05:59:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 05:59:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 05:59:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 05:59:02] 
[2025-11-28 05:59:02] 2025-11-28 04:58:27,409 | INFO     | ***************************************
[2025-11-28 05:59:02] 2025-11-28 04:58:27,912 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-11-28 05:59:02] 2025-11-28 04:58:28,210 | INFO     | sufficient remaining disk space (494368980992 B)
[2025-11-28 05:59:02] 2025-11-28 04:58:28,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 05:59:02] 2025-11-28 04:58:28,210 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 05:59:02] 2025-11-28 04:58:28,210 | INFO     | update_server=False
[2025-11-28 05:59:02] 2025-11-28 04:58:28,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 05:59:02] 2025-11-28 04:58:28,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 05:59:02] 2025-11-28 04:58:28,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:59:02] 2025-11-28 04:58:28,290 | INFO     | aborting loop
[2025-11-28 05:59:02] 2025-11-28 04:58:28,627 | INFO     | all payload control threads have been joined
[2025-11-28 05:59:02] 2025-11-28 04:58:28,829 | INFO     | all job control threads have been joined
[2025-11-28 05:59:02] 2025-11-28 04:58:29,216 | INFO     | [job] retrieve thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:59:02] 2025-11-28 04:58:29,249 | INFO     | [data] copytool_in thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,278 | INFO     | all data control threads have been joined
[2025-11-28 05:59:02] 2025-11-28 04:58:29,296 | INFO     | [job] job monitor thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,505 | INFO     | [payload] failed_post thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,633 | INFO     | [payload] control thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,835 | INFO     | [job] control thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:29,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 05:59:02] 2025-11-28 04:58:30,218 | INFO     | [data] copytool_out thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,254 | INFO     | [job] queue monitor thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,284 | INFO     | [data] control thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,307 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,559 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,560 | INFO     | [job] validate thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,609 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,718 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:30,788 | INFO     | [payload] validate_post thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:33,890 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 05:59:02] 2025-11-28 04:58:36,856 | INFO     | [monitor] cgroup control has ended
[2025-11-28 05:59:02] 2025-11-28 04:58:37,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179730540352)>', '<ExcThread(monitor, started 140179427792640)>']
[2025-11-28 05:59:02] 2025-11-28 04:58:42,889 | INFO     | all workflow threads have been joined
[2025-11-28 05:59:02] 2025-11-28 04:58:42,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 05:59:02] 2025-11-28 04:58:42,890 | INFO     | traces error code: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:42,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 05:59:02] 2025-11-28 04:58:56,656 | INFO     | 79029s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 05:59:02] 2025-11-28 04:58:57,752 | INFO     | PID=25529 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | INFO     | .. there are 2 such processes running
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 05:59:02] 2025-11-28 04:58:57,753 | INFO     | [monitor] control thread has ended
[2025-11-28 05:59:02] 2025-11-28 04:58:58,019 [wrapper] ==== pilot stdout END ====
[2025-11-28 05:59:02] 2025-11-28 04:58:58,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 05:59:02] 2025-11-28 04:58:58,265 [wrapper] pilotpid: 25529
[2025-11-28 05:59:02] 2025-11-28 04:58:58,328 [wrapper] Pilot exit status: 0
[2025-11-28 05:59:02] 2025-11-28 04:58:58,826 [wrapper] pandaids: 6895379527
[2025-11-28 05:59:02] 2025-11-28 04:58:59,840 [wrapper] cleanup supervisor_pilot 30218 25530
[2025-11-28 05:59:02] 2025-11-28 04:58:59,947 [wrapper] Test setup, not cleaning
[2025-11-28 05:59:02] 2025-11-28 04:59:00,037 [wrapper] apfmon messages muted
[2025-11-28 05:59:02] 2025-11-28 04:59:00,093 [wrapper] ==== wrapper stdout END ====
[2025-11-28 05:59:02] 2025-11-28 04:59:00,148 [wrapper] ==== wrapper stderr END ====
[2025-11-28 05:59:02]  *** Error codes and diagnostics ***
[2025-11-28 05:59:02]     "exeErrorCode": 0,
[2025-11-28 05:59:02]     "exeErrorDiag": "",
[2025-11-28 05:59:02]     "pilotErrorCode": 0,
[2025-11-28 05:59:02]     "pilotErrorDiag": "",
[2025-11-28 05:59:02]  *** Listing of results directory ***
[2025-11-28 05:59:02] total 1323032
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc    576529 Nov 24 03:14 pilot3.tar.gz
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc      5112 Nov 24 03:20 queuedata.json
[2025-11-28 05:59:02] -rwx------. 1 boinc boinc     36292 Nov 24 03:21 runpilot2-wrapper.sh
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc       100 Nov 27 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 05:59:02] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 08:00 run_atlas
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc       105 Nov 27 08:00 job.xml
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc      6393 Nov 27 08:00 init_data.xml
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc 409582952 Nov 27 08:00 EVNT.47483658._000979.pool.root.1
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc     15847 Nov 27 08:00 start_atlas.sh
[2025-11-28 05:59:02] drwxrwx--x. 2 boinc boinc        68 Nov 27 08:00 shared
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc    590103 Nov 27 08:00 input.tar.gz
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc         0 Nov 27 08:00 boinc_lockfile
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc      2785 Nov 27 08:01 pandaJob.out
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc    991554 Nov 27 08:01 agis_schedconf.cvmfs.json
[2025-11-28 05:59:02] drwx------. 5 boinc boinc      4096 Nov 27 08:01 pilot3
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc       533 Nov 28 05:28 boinc_task_state.xml
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc 915413209 Nov 28 05:55 HITS.47556137._009655.pool.root.1
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc      1032 Nov 28 05:56 memory_monitor_summary.json
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc   1516240 Nov 28 05:56 agis_ddmendpoints.agis.ALL.json
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc   2385947 Nov 28 05:56 log.47556137._009655.job.log.tgz.1
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc        95 Nov 28 05:58 pilot_heartbeat.json
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc      7955 Nov 28 05:58 heartbeat.json
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc      8192 Nov 28 05:58 boinc_mmap_file
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc        29 Nov 28 05:58 wrapper_checkpoint.txt
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc       936 Nov 28 05:58 pilotlog.txt
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc  10561493 Nov 28 05:59 log.47556137._009655.job.log.1
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc       353 Nov 28 05:59 output.list
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc       620 Nov 28 05:59 runtime_log
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc  12963840 Nov 28 05:59 result.tar.gz
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc       662 Nov 28 05:59 taNODmVNbh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeLLKDmOMuy2n.diag
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc      8833 Nov 28 05:59 runtime_log.err
[2025-11-28 05:59:02] -rw-r--r--. 1 boinc boinc     21501 Nov 28 05:59 stderr.txt
[2025-11-28 05:59:02] HITS file was successfully produced:
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc 915413209 Nov 28 05:55 shared/HITS.pool.root.1
[2025-11-28 05:59:02]  *** Contents of shared directory: ***
[2025-11-28 05:59:02] total 1307200
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc 409582952 Nov 27 08:00 ATLAS.root_0
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc     15847 Nov 27 08:00 start_atlas.sh
[2025-11-28 05:59:02] -rw-r--r--. 2 boinc boinc    590103 Nov 27 08:00 input.tar.gz
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc 915413209 Nov 28 05:55 HITS.pool.root.1
[2025-11-28 05:59:02] -rw-------. 1 boinc boinc  12963840 Nov 28 05:59 result.tar.gz
05:59:04 (21802): run_atlas exited; CPU time 311656.177914
05:59:04 (21802): called boinc_finish(0)

</stderr_txt>
]]>

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