Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:52 (11942): wrapper (7.7.26015): starting
07:13:52 (11942): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 07:13:52] Arguments: --nthreads 8
[2025-11-25 07:13:52] Threads: 8
[2025-11-25 07:13:52] Checking for CVMFS
[2025-11-25 07:13:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:13:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:13:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:13:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:13:53] 2.11.2.0 27562 332613 279472 153281 3 90 16694411 18432001 2827 130560 7 675075803 99.311 1127077920 26037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 07:13:53] CVMFS is ok
[2025-11-25 07:13:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:13:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:13:53] Further information can be found at the LHC@home message board.
[2025-11-25 07:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:13:53] Checking for apptainer binary...
[2025-11-25 07:13:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:13:53] Running /usr/bin/apptainer --version
[2025-11-25 07:13:53] apptainer version 1.3.2-1.el7
[2025-11-25 07:13:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:13:54] c-9-30.aglt2.org
[2025-11-25 07:13:54] apptainer works
[2025-11-25 07:13:54] Set ATHENA_PROC_NUMBER=8
[2025-11-25 07:13:54] Set ATHENA_CORE_NUMBER=8
[2025-11-25 07:13:54] Starting ATLAS job with PandaID=6895674509
[2025-11-25 07:13:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:24:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:24:55] 2025-11-26 05:24:00,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,566 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 00:24:55] 2025-11-26 05:24:00,572 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.8970312500014
[2025-11-26 00:24:55] 2025-11-26 05:24:00,575 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895674509/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,576 | INFO     | extracted standard info from prmon json
[2025-11-26 00:24:55] 2025-11-26 05:24:00,576 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:24:55] 2025-11-26 05:24:00,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:24:55] 2025-11-26 05:24:00,587 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:24:55] 2025-11-26 05:24:00,588 | INFO     | sum of square deviations: 322332626747.9188
[2025-11-26 00:24:55] 2025-11-26 05:24:00,613 | INFO     | sum of deviations: 1838786901786.6204
[2025-11-26 00:24:55] 2025-11-26 05:24:00,613 | INFO     | mean x: 1764103738.6307995
[2025-11-26 00:24:55] 2025-11-26 05:24:00,613 | INFO     | mean y: 2865285.8519249754
[2025-11-26 00:24:55] 2025-11-26 05:24:00,613 | INFO     | intersect: -10060685775.40615
[2025-11-26 00:24:55] 2025-11-26 05:24:00,615 | INFO     | chi2: 5.084522951480811
[2025-11-26 00:24:55] 2025-11-26 05:24:00,620 | INFO     | sum of square deviations: 317583374450.91974
[2025-11-26 00:24:55] 2025-11-26 05:24:00,669 | INFO     | sum of deviations: 2143221033784.806
[2025-11-26 00:24:55] 2025-11-26 05:24:00,669 | INFO     | mean x: 1764103586.1339285
[2025-11-26 00:24:55] 2025-11-26 05:24:00,670 | INFO     | mean y: 2875054.2162698414
[2025-11-26 00:24:55] 2025-11-26 05:24:00,670 | INFO     | intersect: -11902231496.510136
[2025-11-26 00:24:55] 2025-11-26 05:24:00,671 | INFO     | chi2: 2.2531036801587825
[2025-11-26 00:24:55] 2025-11-26 05:24:00,671 | INFO     | current chi2=2.2531036801587825 (change=55.68701918234845 %)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,673 | INFO     | sum of square deviations: 312880945388.17377
[2025-11-26 00:24:55] 2025-11-26 05:24:00,702 | INFO     | sum of deviations: 2172368500735.8796
[2025-11-26 00:24:55] 2025-11-26 05:24:00,702 | INFO     | mean x: 1764103433.6360917
[2025-11-26 00:24:55] 2025-11-26 05:24:00,702 | INFO     | mean y: 2875996.224327019
[2025-11-26 00:24:55] 2025-11-26 05:24:00,703 | INFO     | intersect: -12245497667.172005
[2025-11-26 00:24:55] 2025-11-26 05:24:00,704 | INFO     | chi2: 2.140076617958895
[2025-11-26 00:24:55] 2025-11-26 05:24:00,704 | INFO     | current chi2=2.140076617958895 (change=5.01650515221396 %)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,704 | INFO     | right removable region: 1002
[2025-11-26 00:24:55] 2025-11-26 05:24:00,706 | INFO     | sum of square deviations: 317583046210.186
[2025-11-26 00:24:55] 2025-11-26 05:24:00,736 | INFO     | sum of deviations: 1599351926705.9497
[2025-11-26 00:24:55] 2025-11-26 05:24:00,736 | INFO     | mean x: 1764103891.1329365
[2025-11-26 00:24:55] 2025-11-26 05:24:00,736 | INFO     | mean y: 2872961.709325397
[2025-11-26 00:24:55] 2025-11-26 05:24:00,737 | INFO     | intersect: -8881174820.002619
[2025-11-26 00:24:55] 2025-11-26 05:24:00,738 | INFO     | chi2: 3.242198837285222
[2025-11-26 00:24:55] 2025-11-26 05:24:00,738 | INFO     | current chi2=3.242198837285222 (change=36.23396200147022 %)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,739 | INFO     | sum of square deviations: 312880411882.7135
[2025-11-26 00:24:55] 2025-11-26 05:24:00,770 | INFO     | sum of deviations: 1526264215295.873
[2025-11-26 00:24:55] 2025-11-26 05:24:00,770 | INFO     | mean x: 1764104043.6340978
[2025-11-26 00:24:55] 2025-11-26 05:24:00,770 | INFO     | mean y: 2875331.383848455
[2025-11-26 00:24:55] 2025-11-26 05:24:00,771 | INFO     | intersect: -8602613448.357277
[2025-11-26 00:24:55] 2025-11-26 05:24:00,772 | INFO     | chi2: 3.1778124450316714
[2025-11-26 00:24:55] 2025-11-26 05:24:00,772 | INFO     | current chi2=3.1778124450316714 (change=1.9858865999552087 %)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,772 | INFO     | left removable region: 20
[2025-11-26 00:24:55] 2025-11-26 05:24:00,774 | INFO     | sum of square deviations: 293636843899.7147
[2025-11-26 00:24:55] 2025-11-26 05:24:00,802 | INFO     | sum of deviations: 1756055464912.3975
[2025-11-26 00:24:55] 2025-11-26 05:24:00,803 | INFO     | mean x: 1764104013.1364563
[2025-11-26 00:24:55] 2025-11-26 05:24:00,803 | INFO     | mean y: 2889480.653767821
[2025-11-26 00:24:55] 2025-11-26 05:24:00,803 | INFO     | intersect: -10547096181.227865
[2025-11-26 00:24:55] 2025-11-26 05:24:00,804 | INFO     | chi2: 0.18990336199273308
[2025-11-26 00:24:55] 2025-11-26 05:24:00,805 | INFO     | current memory leak: 5.98 B/s (using 982 data points, chi2=0.19)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,806 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,806 | INFO     | ..............................
[2025-11-26 00:24:55] 2025-11-26 05:24:00,806 | INFO     | . Timing measurements:
[2025-11-26 00:24:55] 2025-11-26 05:24:00,806 | INFO     | . get job = 0 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,806 | INFO     | . initial setup = 2 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | . payload setup = 5 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | . stage-in = 0 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | . payload execution = 61760 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | . stage-out = 4 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | . log creation = 0 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,807 | INFO     | ..............................
[2025-11-26 00:24:55] 2025-11-26 05:24:00,951 | INFO     | 
[2025-11-26 00:24:55] 2025-11-26 05:24:00,951 | INFO     | job summary report
[2025-11-26 00:24:55] 2025-11-26 05:24:00,951 | INFO     | --------------------------------------------------
[2025-11-26 00:24:55] 2025-11-26 05:24:00,951 | INFO     | PanDA job id: 6895674509
[2025-11-26 00:24:55] 2025-11-26 05:24:00,951 | INFO     | task id: 47556149
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | errors: (none)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | pilot state: finished 
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | transexitcode: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | exeerrorcode: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | exeerrordiag: 
[2025-11-26 00:24:55] 2025-11-26 05:24:00,952 | INFO     | exitcode: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | exitmsg: OK
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | cpuconsumptiontime: 477146 s
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | nevents: 1000
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | neventsw: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | pid: 23956
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | pgrp: 23956
[2025-11-26 00:24:55] 2025-11-26 05:24:00,953 | INFO     | corecount: 8
[2025-11-26 00:24:55] 2025-11-26 05:24:00,954 | INFO     | event service: False
[2025-11-26 00:24:55] 2025-11-26 05:24:00,954 | INFO     | sizes: {0: 2284143, 1: 2284342, 4: 2284604, 11: 2284632, 61769: 2337518, 61770: 2337517, 61775: 2346695, 61776: 2346751, 61780: 2346997}
[2025-11-26 00:24:55] 2025-11-26 05:24:00,954 | INFO     | --------------------------------------------------
[2025-11-26 00:24:55] 2025-11-26 05:24:00,954 | INFO     | 
[2025-11-26 00:24:55] 2025-11-26 05:24:00,954 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 00:24:55] 2025-11-26 05:24:00,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:24:55] 2025-11-26 05:24:00,978 | INFO     | job 6895674509 has completed (purged errors)
[2025-11-26 00:24:55] 2025-11-26 05:24:00,978 | INFO     | overall cleanup function is called
[2025-11-26 00:24:55] 2025-11-26 05:24:01,994 | INFO     | --- collectZombieJob: --- 10, [23956]
[2025-11-26 00:24:55] 2025-11-26 05:24:01,995 | INFO     | zombie collector waiting for pid 23956
[2025-11-26 00:24:55] 2025-11-26 05:24:01,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:24:55] 2025-11-26 05:24:01,995 | INFO     | collected zombie processes
[2025-11-26 00:24:55] 2025-11-26 05:24:01,995 | INFO     | will attempt to kill all subprocesses of pid=23956
[2025-11-26 00:24:55] 2025-11-26 05:24:02,236 | INFO     | process IDs to be killed: [23956] (in reverse order)
[2025-11-26 00:24:55] 2025-11-26 05:24:02,317 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:24:55] 2025-11-26 05:24:02,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:24:55] 2025-11-26 05:24:02,323 | INFO     | did not find any defunct processes belonging to 23956
[2025-11-26 00:24:55] 2025-11-26 05:24:02,328 | INFO     | did not find any defunct processes belonging to 23956
[2025-11-26 00:24:55] 2025-11-26 05:24:02,329 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:24:55] 2025-11-26 05:24:02,329 | INFO     | ready for new job
[2025-11-26 00:24:55] 2025-11-26 05:24:02,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:24:55] 2025-11-26 05:24:02,333 | INFO     | ***************************************
[2025-11-26 00:24:55] 2025-11-26 05:24:02,333 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:24:55] 2025-11-26 05:24:02,333 | INFO     | ***************************************
[2025-11-26 00:24:55] 2025-11-26 05:24:02,333 | INFO     | 
[2025-11-26 00:24:55] 2025-11-26 05:24:02,334 | INFO     | architecture information:
[2025-11-26 00:24:55] 2025-11-26 05:24:02,335 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:24:55] 2025-11-26 05:24:02,345 | INFO     | cat /etc/os-release:
[2025-11-26 00:24:55] NAME="CentOS Linux"
[2025-11-26 00:24:55] VERSION="7 (Core)"
[2025-11-26 00:24:55] ID="centos"
[2025-11-26 00:24:55] ID_LIKE="rhel fedora"
[2025-11-26 00:24:55] VERSION_ID="7"
[2025-11-26 00:24:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:24:55] ANSI_COLOR="0;31"
[2025-11-26 00:24:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:24:55] HOME_URL="https://www.centos.org/"
[2025-11-26 00:24:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:24:55] 
[2025-11-26 00:24:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:24:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:24:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:24:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:24:55] 
[2025-11-26 00:24:55] 2025-11-26 05:24:02,345 | INFO     | ***************************************
[2025-11-26 00:24:55] 2025-11-26 05:24:02,848 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 00:24:55] 2025-11-26 05:24:02,865 | INFO     | sufficient remaining disk space (102722699264 B)
[2025-11-26 00:24:55] 2025-11-26 05:24:02,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:24:55] 2025-11-26 05:24:02,865 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:24:55] 2025-11-26 05:24:02,865 | INFO     | update_server=False
[2025-11-26 00:24:55] 2025-11-26 05:24:02,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:24:55] 2025-11-26 05:24:02,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:24:55] 2025-11-26 05:24:02,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:24:55] 2025-11-26 05:24:02,908 | INFO     | all job control threads have been joined
[2025-11-26 00:24:55] 2025-11-26 05:24:02,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:24:55] 2025-11-26 05:24:03,048 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 00:24:55] 2025-11-26 05:24:03,049 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 00:24:55] 2025-11-26 05:24:03,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:24:55] 2025-11-26 05:24:03,049 | INFO     | will abort loop
[2025-11-26 00:24:55] 2025-11-26 05:24:03,674 | INFO     | all payload control threads have been joined
[2025-11-26 00:24:55] 2025-11-26 05:24:03,694 | INFO     | all data control threads have been joined
[2025-11-26 00:24:55] 2025-11-26 05:24:03,871 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:03,872 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:03,914 | INFO     | [job] control thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,055 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,624 | INFO     | [job] validate thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,680 | INFO     | [payload] control thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,681 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,692 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,699 | INFO     | [data] control thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,760 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:04,872 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:05,071 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:05,194 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:05,204 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:06,992 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:24:55] 2025-11-26 05:24:32,626 | INFO     | PID=17457 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:24:55] 2025-11-26 05:24:32,626 | INFO     | .. there are 4 such processes running
[2025-11-26 00:24:55] 2025-11-26 05:24:32,626 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:24:55] 2025-11-26 05:24:32,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:24:55] 2025-11-26 05:24:32,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:24:55] 2025-11-26 05:24:49,243 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:24:55] 2025-11-26 05:24:49,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538605807424)>', '<ExcThread(monitor, started 140538024023808)>']
[2025-11-26 00:24:55] 2025-11-26 05:24:50,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:24:55] 2025-11-26 05:24:50,727 | INFO     | [monitor] control thread has ended
[2025-11-26 00:24:55] 2025-11-26 05:24:54,907 | INFO     | all workflow threads have been joined
[2025-11-26 00:24:55] 2025-11-26 05:24:54,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:24:55] 2025-11-26 05:24:54,908 | INFO     | traces error code: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:54,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:24:55] 2025-11-26 05:24:55,036 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:24:55] 2025-11-26 05:24:55,038 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:24:55] 2025-11-26 05:24:55,040 [wrapper] pilotpid: 17457
[2025-11-26 00:24:55] 2025-11-26 05:24:55,042 [wrapper] Pilot exit status: 0
[2025-11-26 00:24:55] 2025-11-26 05:24:55,051 [wrapper] pandaids: 6895674509
[2025-11-26 00:24:55] 2025-11-26 05:24:55,098 [wrapper] cleanup supervisor_pilot  9777 17458
[2025-11-26 00:24:55] 2025-11-26 05:24:55,100 [wrapper] Test setup, not cleaning
[2025-11-26 00:24:55] 2025-11-26 05:24:55,102 [wrapper] apfmon messages muted
[2025-11-26 00:24:55] 2025-11-26 05:24:55,105 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:24:55] 2025-11-26 05:24:55,107 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:24:55]  *** Error codes and diagnostics ***
[2025-11-26 00:24:55]     "exeErrorCode": 0,
[2025-11-26 00:24:55]     "exeErrorDiag": "",
[2025-11-26 00:24:55]     "pilotErrorCode": 0,
[2025-11-26 00:24:55]     "pilotErrorDiag": "",
[2025-11-26 00:24:55]  *** Listing of results directory ***
[2025-11-26 00:24:55] total 1327024
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 08:50 queuedata.json
[2025-11-26 00:24:55] -rwx------ 1 boincer umatlas     36292 Nov 24 08:54 runpilot2-wrapper.sh
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas       100 Nov 25 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:24:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 07:13 run_atlas
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas       105 Nov 25 07:13 job.xml
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas 410203558 Nov 25 07:13 EVNT.47483658._001356.pool.root.1
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 07:13 start_atlas.sh
[2025-11-26 00:24:55] drwxrwx--x 2 boincer umatlas      4096 Nov 25 07:13 shared
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 07:13 input.tar.gz
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas         0 Nov 25 07:13 boinc_lockfile
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 07:13 pandaJob.out
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas        57 Nov 25 07:13 setup.sh.local
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas    991894 Nov 25 07:14 agis_schedconf.cvmfs.json
[2025-11-26 00:24:55] drwx------ 5 boincer umatlas      4096 Nov 25 07:14 pilot3
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas       532 Nov 26 00:15 boinc_task_state.xml
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas      6037 Nov 26 00:21 init_data.xml
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas 923489002 Nov 26 00:23 HITS.47556149._003422.pool.root.1
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas        95 Nov 26 00:23 pilot_heartbeat.json
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas      1062 Nov 26 00:23 memory_monitor_summary.json
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas   1516240 Nov 26 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas   2215392 Nov 26 00:23 log.47556149._003422.job.log.tgz.1
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas      8645 Nov 26 00:24 heartbeat.json
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 00:24 boinc_mmap_file
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas        29 Nov 26 00:24 wrapper_checkpoint.txt
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas      5008 Nov 26 00:24 pilotlog.txt
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas   8416841 Nov 26 00:24 log.47556149._003422.job.log.1
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas       353 Nov 26 00:24 output.list
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas       620 Nov 26 00:24 runtime_log
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas  10649600 Nov 26 00:24 result.tar.gz
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas      9333 Nov 26 00:24 runtime_log.err
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas       665 Nov 26 00:24 GU6LDmxCmh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm84IKDm94rM8m.diag
[2025-11-26 00:24:55] -rw-r--r-- 1 boincer umatlas     21319 Nov 26 00:24 stderr.txt
[2025-11-26 00:24:55] HITS file was successfully produced:
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas 923489002 Nov 26 00:23 shared/HITS.pool.root.1
[2025-11-26 00:24:55]  *** Contents of shared directory: ***
[2025-11-26 00:24:55] total 1313440
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas 410203558 Nov 25 07:13 ATLAS.root_0
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 07:13 start_atlas.sh
[2025-11-26 00:24:55] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 07:13 input.tar.gz
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas 923489002 Nov 26 00:23 HITS.pool.root.1
[2025-11-26 00:24:55] -rw------- 1 boincer umatlas  10649600 Nov 26 00:24 result.tar.gz
00:24:56 (11942): run_atlas exited; CPU time 477515.770162
00:24:56 (11942): called boinc_finish(0)

</stderr_txt>
]]>

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