Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:44:23 (1240269): wrapper (7.7.26015): starting
11:44:23 (1240269): wrapper: running run_atlas (--nthreads 3)
[2025-11-29 11:44:23] Arguments: --nthreads 3
[2025-11-29 11:44:23] Threads: 3
[2025-11-29 11:44:23] Checking for CVMFS
[2025-11-29 11:44:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 11:44:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 11:44:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 11:44:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 11:44:23] 2.9.2.0 541886 2893 72868 153439 2 81 35866466 36864000 0 130560 0 1070442 99.980 105990 517 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-29 11:44:23] CVMFS is ok
[2025-11-29 11:44:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 11:44:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 11:44:23] Further information can be found at the LHC@home message board.
[2025-11-29 11:44:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 11:44:23] Checking for apptainer binary...
[2025-11-29 11:44:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 11:44:23] Running /usr/bin/apptainer --version
[2025-11-29 11:44:23] apptainer version 1.4.1-1.1
[2025-11-29 11:44:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 11:44:23] atlasA230
[2025-11-29 11:44:23] apptainer works
[2025-11-29 11:44:23] Set ATHENA_PROC_NUMBER=3
[2025-11-29 11:44:23] Set ATHENA_CORE_NUMBER=3
[2025-11-29 11:44:23] Starting ATLAS job with PandaID=6895674318
[2025-11-29 11:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 19:38:08]  *** The last 200 lines of the pilot log: ***
[2025-11-29 19:38:08] 2025-11-29 18:37:32,193 | INFO     | ready for new job
[2025-11-29 19:38:08] 2025-11-29 18:37:32,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 19:38:08] 2025-11-29 18:37:32,194 | INFO     | ***************************************
[2025-11-29 19:38:08] 2025-11-29 18:37:32,194 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 19:38:08] 2025-11-29 18:37:32,194 | INFO     | ***************************************
[2025-11-29 19:38:08] 2025-11-29 18:37:32,194 | INFO     | 
[2025-11-29 19:38:08] 2025-11-29 18:37:32,194 | INFO     | architecture information:
[2025-11-29 19:38:08] 2025-11-29 18:37:32,195 | INFO     | executing command: cat /etc/os-release
[2025-11-29 19:38:08] 2025-11-29 18:37:32,204 | INFO     | cat /etc/os-release:
[2025-11-29 19:38:08] NAME="CentOS Linux"
[2025-11-29 19:38:08] VERSION="7 (Core)"
[2025-11-29 19:38:08] ID="centos"
[2025-11-29 19:38:08] ID_LIKE="rhel fedora"
[2025-11-29 19:38:08] VERSION_ID="7"
[2025-11-29 19:38:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 19:38:08] ANSI_COLOR="0;31"
[2025-11-29 19:38:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 19:38:08] HOME_URL="https://www.centos.org/"
[2025-11-29 19:38:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 19:38:08] 
[2025-11-29 19:38:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 19:38:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 19:38:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 19:38:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 19:38:08] 
[2025-11-29 19:38:08] 2025-11-29 18:37:32,204 | INFO     | ***************************************
[2025-11-29 19:38:08] 2025-11-29 18:37:32,707 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | INFO     | sufficient remaining disk space (320855867392 B)
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | INFO     | update_server=False
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 19:38:08] 2025-11-29 18:37:32,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:38:08] 2025-11-29 18:37:32,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 19:38:08] 2025-11-29 18:37:32,851 | INFO     | all payload control threads have been joined
[2025-11-29 19:38:08] 2025-11-29 18:37:33,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:38:08] 2025-11-29 18:37:33,326 | INFO     | aborting loop
[2025-11-29 19:38:08] 2025-11-29 18:37:33,390 | INFO     | all data control threads have been joined
[2025-11-29 19:38:08] 2025-11-29 18:37:33,722 | INFO     | [job] retrieve thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:33,725 | INFO     | [job] queue monitor thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:33,841 | INFO     | [payload] validate_post thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:33,857 | INFO     | [payload] control thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:33,912 | INFO     | [data] copytool_in thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,101 | INFO     | all job control threads have been joined
[2025-11-29 19:38:08] 2025-11-29 18:37:34,331 | INFO     | [job] job monitor thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,359 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,395 | INFO     | [data] control thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,503 | INFO     | [job] validate thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,537 | INFO     | [payload] failed_post thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,609 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,713 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,725 | INFO     | [data] copytool_out thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:34,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 19:38:08] 2025-11-29 18:37:35,106 | INFO     | [job] control thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:38,827 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:37:42,745 | INFO     | job.realtimelogging is not enabled
[2025-11-29 19:38:08] 2025-11-29 18:37:43,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 19:38:08] 2025-11-29 18:38:02,962 | INFO     | [monitor] cgroup control has ended
[2025-11-29 19:38:08] 2025-11-29 18:38:03,228 | INFO     | PID=1243997 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 19:38:08] 2025-11-29 18:38:03,228 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 19:38:08] 2025-11-29 18:38:03,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 19:38:08] 2025-11-29 18:38:03,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 19:38:08] 2025-11-29 18:38:03,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861971294016)>', '<ExcThread(monitor, started 139861616998144)>']
[2025-11-29 19:38:08] 2025-11-29 18:38:04,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 19:38:08] 2025-11-29 18:38:04,234 | INFO     | [monitor] control thread has ended
[2025-11-29 19:38:08] 2025-11-29 18:38:08,541 | INFO     | all workflow threads have been joined
[2025-11-29 19:38:08] 2025-11-29 18:38:08,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 19:38:08] 2025-11-29 18:38:08,542 | INFO     | traces error code: 0
[2025-11-29 19:38:08] 2025-11-29 18:38:08,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 19:38:08] 2025-11-29 18:38:08,591 [wrapper] ==== pilot stdout END ====
[2025-11-29 19:38:08] 2025-11-29 18:38:08,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 19:38:08] 2025-11-29 18:38:08,596 [wrapper] pilotpid: 1243997
[2025-11-29 19:38:08] 2025-11-29 18:38:08,598 [wrapper] Pilot exit status: 0
[2025-11-29 19:38:08] 2025-11-29 18:38:08,606 [wrapper] pandaids: 6895674318
[2025-11-29 19:38:08] 2025-11-29 18:38:08,624 [wrapper] cleanup supervisor_pilot 1352492 1243998
[2025-11-29 19:38:08] 2025-11-29 18:38:08,627 [wrapper] Test setup, not cleaning
[2025-11-29 19:38:08] 2025-11-29 18:38:08,629 [wrapper] apfmon messages muted
[2025-11-29 19:38:08] 2025-11-29 18:38:08,631 [wrapper] ==== wrapper stdout END ====
[2025-11-29 19:38:08] 2025-11-29 18:38:08,633 [wrapper] ==== wrapper stderr END ====
[2025-11-29 19:38:08]  *** Error codes and diagnostics ***
[2025-11-29 19:38:08]     "exeErrorCode": 0,
[2025-11-29 19:38:08]     "exeErrorDiag": "",
[2025-11-29 19:38:08]     "pilotErrorCode": 0,
[2025-11-29 19:38:08]     "pilotErrorDiag": "",
[2025-11-29 19:38:08]  *** Listing of results directory ***
[2025-11-29 19:38:08] total 1297460
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc    576529 Nov 24 14:08 pilot3.tar.gz
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      5112 Nov 24 14:22 queuedata.json
[2025-11-29 19:38:08] -rwx------ 1 boinc boinc     36292 Nov 24 14:25 runpilot2-wrapper.sh
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc       100 Nov 29 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 19:38:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 11:44 run_atlas
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc       105 Nov 29 11:44 job.xml
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc 408514664 Nov 29 11:44 EVNT.47483658._001351.pool.root.1
[2025-11-29 19:38:08] drwxrwx--x 2 boinc boinc      4096 Nov 29 11:44 shared
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc    590105 Nov 29 11:44 input.tar.gz
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc     15847 Nov 29 11:44 start_atlas.sh
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc         0 Nov 29 11:44 boinc_setup_complete
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      6443 Nov 29 11:44 init_data.xml
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc         0 Nov 29 11:44 boinc_lockfile
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      2785 Nov 29 11:44 pandaJob.out
[2025-11-29 19:38:08] -rw------- 1 boinc boinc    991834 Nov 29 11:44 agis_schedconf.cvmfs.json
[2025-11-29 19:38:08] drwx------ 5 boinc boinc      4096 Nov 29 11:44 pilot3
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc       531 Nov 29 19:34 boinc_task_state.xml
[2025-11-29 19:38:08] -rw------- 1 boinc boinc 905868703 Nov 29 19:37 HITS.47556149._003378.pool.root.1
[2025-11-29 19:38:08] -rw------- 1 boinc boinc        95 Nov 29 19:37 pilot_heartbeat.json
[2025-11-29 19:38:08] -rw------- 1 boinc boinc      1029 Nov 29 19:37 memory_monitor_summary.json
[2025-11-29 19:38:08] -rw------- 1 boinc boinc   1516240 Nov 29 19:37 agis_ddmendpoints.agis.ALL.json
[2025-11-29 19:38:08] -rw------- 1 boinc boinc   1163245 Nov 29 19:37 log.47556149._003378.job.log.tgz.1
[2025-11-29 19:38:08] -rw------- 1 boinc boinc      8572 Nov 29 19:37 heartbeat.json
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      8192 Nov 29 19:37 boinc_mmap_file
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc        28 Nov 29 19:37 wrapper_checkpoint.txt
[2025-11-29 19:38:08] -rw------- 1 boinc boinc      4824 Nov 29 19:38 pilotlog.txt
[2025-11-29 19:38:08] -rw------- 1 boinc boinc   3990387 Nov 29 19:38 log.47556149._003378.job.log.1
[2025-11-29 19:38:08] -rw------- 1 boinc boinc       353 Nov 29 19:38 output.list
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc       620 Nov 29 19:38 runtime_log
[2025-11-29 19:38:08] -rw------- 1 boinc boinc   5171200 Nov 29 19:38 result.tar.gz
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      8913 Nov 29 19:38 runtime_log.err
[2025-11-29 19:38:08] -rw------- 1 boinc boinc       668 Nov 29 19:38 0dOODmFklh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxhLKDm6GJQZm.diag
[2025-11-29 19:38:08] -rw-r--r-- 1 boinc boinc      9621 Nov 29 19:38 stderr.txt
[2025-11-29 19:38:08] HITS file was successfully produced:
[2025-11-29 19:38:08] -rw------- 1 boinc boinc 905868703 Nov 29 19:37 shared/HITS.pool.root.1
[2025-11-29 19:38:08]  *** Contents of shared directory: ***
[2025-11-29 19:38:08] total 1289240
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc 408514664 Nov 29 11:44 ATLAS.root_0
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc    590105 Nov 29 11:44 input.tar.gz
[2025-11-29 19:38:08] -rw-r--r-- 2 boinc boinc     15847 Nov 29 11:44 start_atlas.sh
[2025-11-29 19:38:08] -rw------- 1 boinc boinc 905868703 Nov 29 19:37 HITS.pool.root.1
[2025-11-29 19:38:08] -rw------- 1 boinc boinc   5171200 Nov 29 19:38 result.tar.gz
19:38:10 (1240269): run_atlas exited; CPU time 83914.539199
19:38:10 (1240269): called boinc_finish(0)

</stderr_txt>
]]>

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