Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:23:45 (1833528): wrapper (7.7.26015): starting
00:23:45 (1833528): wrapper: running run_atlas (--nthreads 3)
[2025-11-28 00:23:45] Arguments: --nthreads 3
[2025-11-28 00:23:45] Threads: 3
[2025-11-28 00:23:45] Checking for CVMFS
[2025-11-28 00:23:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:23:46] 2.9.2.0 28796 13368 100948 153390 3 81 31197697 36864000 0 130560 1 5013286 99.944 660719 850 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 00:23:46] CVMFS is ok
[2025-11-28 00:23:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:23:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:23:46] Further information can be found at the LHC@home message board.
[2025-11-28 00:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:23:46] Checking for apptainer binary...
[2025-11-28 00:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:23:46] Running /usr/bin/apptainer --version
[2025-11-28 00:23:46] apptainer version 1.4.1-1.1
[2025-11-28 00:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:23:46] thA331b
[2025-11-28 00:23:46] apptainer works
[2025-11-28 00:23:46] Set ATHENA_PROC_NUMBER=3
[2025-11-28 00:23:46] Set ATHENA_CORE_NUMBER=3
[2025-11-28 00:23:46] Starting ATLAS job with PandaID=6895674500
[2025-11-28 00:23:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:06:28]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:06:28] 
[2025-11-28 08:06:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:06:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:06:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:06:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:06:28] 
[2025-11-28 08:06:28] 2025-11-28 07:05:25,425 | INFO     | ***************************************
[2025-11-28 08:06:28] 2025-11-28 07:05:25,928 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 08:06:28] 2025-11-28 07:05:25,941 | INFO     | sufficient remaining disk space (225570717696 B)
[2025-11-28 08:06:28] 2025-11-28 07:05:25,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:06:28] 2025-11-28 07:05:25,942 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:06:28] 2025-11-28 07:05:25,942 | INFO     | update_server=False
[2025-11-28 08:06:28] 2025-11-28 07:05:25,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:06:28] 2025-11-28 07:05:25,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:06:28] 2025-11-28 07:05:26,212 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 08:06:28] 2025-11-28 07:05:26,212 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 08:06:28] 2025-11-28 07:05:26,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:06:28] 2025-11-28 07:05:26,213 | INFO     | will abort loop
[2025-11-28 08:06:28] 2025-11-28 07:05:26,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:06:28] 2025-11-28 07:05:26,562 | INFO     | all data control threads have been joined
[2025-11-28 08:06:28] 2025-11-28 07:05:26,933 | INFO     | all payload control threads have been joined
[2025-11-28 08:06:28] 2025-11-28 07:05:26,947 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:26,948 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,218 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,277 | INFO     | all job control threads have been joined
[2025-11-28 08:06:28] 2025-11-28 07:05:27,568 | INFO     | [data] control thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,590 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,694 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,939 | INFO     | [payload] control thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:27,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:06:28] 2025-11-28 07:05:28,130 | INFO     | [job] validate thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,150 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,222 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,245 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,283 | INFO     | [job] control thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,411 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:28,493 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:31,964 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:36,007 | INFO     | job.realtimelogging is not enabled
[2025-11-28 08:06:28] 2025-11-28 07:05:37,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:06:28] 2025-11-28 07:05:57,035 | INFO     | PID=1837256 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:06:28] 2025-11-28 07:05:57,035 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:06:28] 2025-11-28 07:05:57,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:06:28] 2025-11-28 07:05:57,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:06:28] 2025-11-28 07:06:22,376 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:06:28] 2025-11-28 07:06:23,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538819188544)>', '<ExcThread(monitor, started 140538477000448)>']
[2025-11-28 08:06:28] 2025-11-28 07:06:23,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:06:28] 2025-11-28 07:06:23,174 | INFO     | [monitor] control thread has ended
[2025-11-28 08:06:28] 2025-11-28 07:06:28,175 | INFO     | all workflow threads have been joined
[2025-11-28 08:06:28] 2025-11-28 07:06:28,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:06:28] 2025-11-28 07:06:28,176 | INFO     | traces error code: 0
[2025-11-28 08:06:28] 2025-11-28 07:06:28,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:06:28] 2025-11-28 07:06:28,228 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:06:28] 2025-11-28 07:06:28,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:06:28] 2025-11-28 07:06:28,233 [wrapper] pilotpid: 1837256
[2025-11-28 08:06:28] 2025-11-28 07:06:28,235 [wrapper] Pilot exit status: 0
[2025-11-28 08:06:28] 2025-11-28 07:06:28,242 [wrapper] pandaids: 6895674500
[2025-11-28 08:06:28] 2025-11-28 07:06:28,259 [wrapper] cleanup supervisor_pilot 1890673 1837257
[2025-11-28 08:06:28] 2025-11-28 07:06:28,261 [wrapper] Test setup, not cleaning
[2025-11-28 08:06:28] 2025-11-28 07:06:28,263 [wrapper] apfmon messages muted
[2025-11-28 08:06:28] 2025-11-28 07:06:28,265 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:06:28] 2025-11-28 07:06:28,268 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:06:28]  *** Error codes and diagnostics ***
[2025-11-28 08:06:28]     "exeErrorCode": 0,
[2025-11-28 08:06:28]     "exeErrorDiag": "",
[2025-11-28 08:06:28]     "pilotErrorCode": 0,
[2025-11-28 08:06:28]     "pilotErrorDiag": "",
[2025-11-28 08:06:28]  *** Listing of results directory ***
[2025-11-28 08:06:28] total 1300356
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc    576529 Nov 24 14:08 pilot3.tar.gz
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      5112 Nov 24 14:41 queuedata.json
[2025-11-28 08:06:28] -rwx------ 1 boinc boinc     36292 Nov 24 14:46 runpilot2-wrapper.sh
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc       100 Nov 28 00:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:06:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 00:23 run_atlas
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc       105 Nov 28 00:23 job.xml
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc 409598849 Nov 28 00:23 EVNT.47483658._002048.pool.root.1
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc    590102 Nov 28 00:23 input.tar.gz
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc     15847 Nov 28 00:23 start_atlas.sh
[2025-11-28 08:06:28] drwxrwx--x 2 boinc boinc      4096 Nov 28 00:23 shared
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc         0 Nov 28 00:23 boinc_setup_complete
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      6442 Nov 28 00:23 init_data.xml
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc         0 Nov 28 00:23 boinc_lockfile
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      2785 Nov 28 00:23 pandaJob.out
[2025-11-28 08:06:28] -rw------- 1 boinc boinc    991532 Nov 28 00:23 agis_schedconf.cvmfs.json
[2025-11-28 08:06:28] drwx------ 5 boinc boinc      4096 Nov 28 00:23 pilot3
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc       532 Nov 28 08:01 boinc_task_state.xml
[2025-11-28 08:06:28] -rw------- 1 boinc boinc 907966594 Nov 28 08:05 HITS.47556161._000313.pool.root.1
[2025-11-28 08:06:28] -rw------- 1 boinc boinc        95 Nov 28 08:05 pilot_heartbeat.json
[2025-11-28 08:06:28] -rw------- 1 boinc boinc      1025 Nov 28 08:05 memory_monitor_summary.json
[2025-11-28 08:06:28] -rw------- 1 boinc boinc   1516240 Nov 28 08:05 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:06:28] -rw------- 1 boinc boinc   1147187 Nov 28 08:05 log.47556161._000313.job.log.tgz.1
[2025-11-28 08:06:28] -rw------- 1 boinc boinc      7900 Nov 28 08:05 heartbeat.json
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      8192 Nov 28 08:06 boinc_mmap_file
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc        28 Nov 28 08:06 wrapper_checkpoint.txt
[2025-11-28 08:06:28] -rw------- 1 boinc boinc      5010 Nov 28 08:06 pilotlog.txt
[2025-11-28 08:06:28] -rw------- 1 boinc boinc   3901982 Nov 28 08:06 log.47556161._000313.job.log.1
[2025-11-28 08:06:28] -rw------- 1 boinc boinc       353 Nov 28 08:06 output.list
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc       620 Nov 28 08:06 runtime_log
[2025-11-28 08:06:28] -rw------- 1 boinc boinc   5068800 Nov 28 08:06 result.tar.gz
[2025-11-28 08:06:28] -rw------- 1 boinc boinc       666 Nov 28 08:06 wImNDmp4lh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRiLKDmXQSYgn.diag
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      8903 Nov 28 08:06 runtime_log.err
[2025-11-28 08:06:28] -rw-r--r-- 1 boinc boinc      8558 Nov 28 08:06 stderr.txt
[2025-11-28 08:06:28] HITS file was successfully produced:
[2025-11-28 08:06:28] -rw------- 1 boinc boinc 907966594 Nov 28 08:05 shared/HITS.pool.root.1
[2025-11-28 08:06:28]  *** Contents of shared directory: ***
[2025-11-28 08:06:28] total 1292240
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc 409598849 Nov 28 00:23 ATLAS.root_0
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc    590102 Nov 28 00:23 input.tar.gz
[2025-11-28 08:06:28] -rw-r--r-- 2 boinc boinc     15847 Nov 28 00:23 start_atlas.sh
[2025-11-28 08:06:28] -rw------- 1 boinc boinc 907966594 Nov 28 08:05 HITS.pool.root.1
[2025-11-28 08:06:28] -rw------- 1 boinc boinc   5068800 Nov 28 08:06 result.tar.gz
08:06:29 (1833528): run_atlas exited; CPU time 81667.908352
08:06:29 (1833528): called boinc_finish(0)

</stderr_txt>
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