Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:57:41 (676024): wrapper (7.7.26015): starting
03:57:41 (676024): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 03:57:41] Arguments: --nthreads 12
[2025-11-25 03:57:41] Threads: 12
[2025-11-25 03:57:41] Checking for CVMFS
[2025-11-25 03:57:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:57:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:57:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:57:42] 2.11.5.0 4091557 26628 215760 153281 3 670 28289829 45568000 12489 130560 0 200564126 99.754 141874353 22848 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 03:57:42] CVMFS is ok
[2025-11-25 03:57:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:57:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:57:42] Further information can be found at the LHC@home message board.
[2025-11-25 03:57:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:57:42] Checking for apptainer binary...
[2025-11-25 03:57:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:57:42] Running /usr/bin/apptainer --version
[2025-11-25 03:57:43] apptainer version 1.4.1-1.el9
[2025-11-25 03:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:57:43] wns0073.triumf.lcg
[2025-11-25 03:57:43] apptainer works
[2025-11-25 03:57:43] Set ATHENA_PROC_NUMBER=12
[2025-11-25 03:57:43] Set ATHENA_CORE_NUMBER=12
[2025-11-25 03:57:43] Starting ATLAS job with PandaID=6896297806
[2025-11-25 03:57:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:06:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:06:24] 2025-11-25 12:05:24,741 | INFO     | could have reported an average CPU frequency of 1327 MHz (4 samples)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | . Timing measurements:
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . get job = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . initial setup = 4 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload setup = 20 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-in = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload execution = 221 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-out = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . log creation = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 04:06:24] 2025-11-25 12:05:24,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896297806/pilotlog.txt
[2025-11-25 04:06:24] 2025-11-25 12:05:24,851 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 04:06:24] - Log from pilotlog.txt -
[2025-11-25 04:06:24] 2025-11-25 12:05:24,737 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896297806/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | INFO     | extracted standard info from prmon json
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:06:24] 2025-11-25 12:05:24,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 04:06:24] 2025-11-25 12:05:24,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 04:06:24] 2025-11-25 12:05:24,740 | WARNING  | wrong length of table data, x=[1764071979.0, 1764072040.0, 1764072101.0, 1764072162.0], y=[1131.0, 564275.0, 932873.0, 596646.0] (must be same and length>=4)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,741 | INFO     | could have reported an average CPU frequency of 1327 MHz (4 samples)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | . Timing measurements:
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . get job = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . initial setup = 4 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload setup = 20 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-in = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload execution = 221 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-out = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . log creation = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 04:06:24] 2025-11-25 12:05:24,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896297806/pilotlog.txt
[2025-11-25 04:06:24] 2025-11-25 12:05:24,852 | WARNING  | 
[2025-11-25 04:06:24] [begin log extracts]
[2025-11-25 04:06:24] - Log from pilotlog.txt -
[2025-11-25 04:06:24] 2025-11-25 12:05:24,737 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896297806/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | INFO     | extracted standard info from prmon json
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:06:24] 2025-11-25 12:05:24,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:06:24] 2025-11-25 12:05:24,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 04:06:24] 2025-11-25 12:05:24,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 04:06:24] 2025-11-25 12:05:24,740 | WARNING  | wrong length of table data, x=[1764071979.0, 1764072040.0, 1764072101.0, 1764072162.0], y=[1131.0, 564275.0, 932873.0, 596646.0] (must be same and length>=4)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,741 | INFO     | could have reported an average CPU frequency of 1327 MHz (4 samples)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,751 | INFO     | . Timing measurements:
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . get job = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . initial setup = 4 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload setup = 20 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-in = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . payload execution = 221 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . stage-out = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | . log creation = 0 s
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | ..............................
[2025-11-25 04:06:24] 2025-11-25 12:05:24,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 04:06:24] 2025-11-25 12:05:24,753 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896297806/pilotlog.txt
[2025-11-25 04:06:24] [end log extracts]
[2025-11-25 04:06:24] 2025-11-25 12:05:24,852 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 04:06:24] 2025-11-25 12:05:24,853 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 04:06:24] 2025-11-25 12:05:25,120 | INFO     | 
[2025-11-25 04:06:24] 2025-11-25 12:05:25,121 | INFO     | job summary report
[2025-11-25 04:06:24] 2025-11-25 12:05:25,121 | INFO     | --------------------------------------------------
[2025-11-25 04:06:24] 2025-11-25 12:05:25,121 | INFO     | PanDA job id: 6896297806
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | task id: 47556161
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 04:02:58,206 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | pilot state: failed 
[2025-11-25 04:06:24] 2025-11-25 12:05:25,122 | INFO     | transexitcode: 65
[2025-11-25 04:06:24] 2025-11-25 12:05:25,143 | INFO     | exeerrorcode: 65
[2025-11-25 04:06:24] 2025-11-25 12:05:25,143 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 04:06:24] 2025-11-25 12:05:25,143 | INFO     | exitcode: 65
[2025-11-25 04:06:24] 2025-11-25 12:05:25,143 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | cpuconsumptiontime: 80 s
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | nevents: 0
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | neventsw: 0
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | pid: 694394
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | pgrp: 694394
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | corecount: 12
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | event service: False
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | sizes: {0: 2283434, 1: 2284116, 2: 2284315, 14: 2284315, 20: 2284605, 25: 2284633, 246: 2310212, 248: 2314530, 385: 2314668}
[2025-11-25 04:06:24] 2025-11-25 12:05:25,144 | INFO     | --------------------------------------------------
[2025-11-25 04:06:24] 2025-11-25 12:05:25,145 | INFO     | 
[2025-11-25 04:06:24] 2025-11-25 12:05:25,145 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 04:06:24] 2025-11-25 12:05:25,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:06:24] 2025-11-25 12:05:25,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:06:24] 2025-11-25 12:05:25,262 | INFO     | job 6896297806 has completed (purged errors)
[2025-11-25 04:06:24] 2025-11-25 12:05:25,289 | INFO     | overall cleanup function is called
[2025-11-25 04:06:24] 2025-11-25 12:05:26,319 | INFO     | --- collectZombieJob: --- 10, [694394]
[2025-11-25 04:06:24] 2025-11-25 12:05:26,319 | INFO     | zombie collector waiting for pid 694394
[2025-11-25 04:06:24] 2025-11-25 12:05:26,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:06:24] 2025-11-25 12:05:26,320 | INFO     | collected zombie processes
[2025-11-25 04:06:24] 2025-11-25 12:05:26,320 | INFO     | will attempt to kill all subprocesses of pid=694394
[2025-11-25 04:06:24] 2025-11-25 12:05:27,732 | INFO     | process IDs to be killed: [694394] (in reverse order)
[2025-11-25 04:06:24] 2025-11-25 12:05:27,851 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:06:24] 2025-11-25 12:05:27,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:06:24] 2025-11-25 12:05:27,868 | INFO     | did not find any defunct processes belonging to 694394
[2025-11-25 04:06:24] 2025-11-25 12:05:27,881 | INFO     | did not find any defunct processes belonging to 694394
[2025-11-25 04:06:24] 2025-11-25 12:05:27,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:06:24] 2025-11-25 12:05:27,883 | INFO     | ready for new job
[2025-11-25 04:06:24] 2025-11-25 12:05:27,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:06:24] 2025-11-25 12:05:27,890 | INFO     | ***************************************
[2025-11-25 04:06:24] 2025-11-25 12:05:27,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:06:24] 2025-11-25 12:05:27,890 | INFO     | ***************************************
[2025-11-25 04:06:24] 2025-11-25 12:05:27,890 | INFO     | 
[2025-11-25 04:06:24] 2025-11-25 12:05:27,894 | INFO     | architecture information:
[2025-11-25 04:06:24] 2025-11-25 12:05:27,894 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:06:24] 2025-11-25 12:05:27,918 | INFO     | cat /etc/os-release:
[2025-11-25 04:06:24] NAME="CentOS Linux"
[2025-11-25 04:06:24] VERSION="7 (Core)"
[2025-11-25 04:06:24] ID="centos"
[2025-11-25 04:06:24] ID_LIKE="rhel fedora"
[2025-11-25 04:06:24] VERSION_ID="7"
[2025-11-25 04:06:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:06:24] ANSI_COLOR="0;31"
[2025-11-25 04:06:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:06:24] HOME_URL="https://www.centos.org/"
[2025-11-25 04:06:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:06:24] 
[2025-11-25 04:06:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:06:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:06:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:06:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:06:24] 
[2025-11-25 04:06:24] 2025-11-25 12:05:27,919 | INFO     | ***************************************
[2025-11-25 04:06:24] 2025-11-25 12:05:28,422 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 04:06:24] 2025-11-25 12:05:28,540 | INFO     | sufficient remaining disk space (1090570420224 B)
[2025-11-25 04:06:24] 2025-11-25 12:05:28,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:06:24] 2025-11-25 12:05:28,541 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:06:24] 2025-11-25 12:05:28,541 | INFO     | update_server=False
[2025-11-25 04:06:24] 2025-11-25 12:05:28,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:06:24] 2025-11-25 12:05:28,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:06:24] 2025-11-25 12:05:28,697 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 04:06:24] 2025-11-25 12:05:28,698 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 04:06:24] 2025-11-25 12:05:28,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:06:24] 2025-11-25 12:05:28,698 | INFO     | will abort loop
[2025-11-25 04:06:24] 2025-11-25 12:05:28,726 | INFO     | all data control threads have been joined
[2025-11-25 04:06:24] 2025-11-25 12:05:28,729 | INFO     | all job control threads have been joined
[2025-11-25 04:06:24] 2025-11-25 12:05:29,451 | INFO     | all payload control threads have been joined
[2025-11-25 04:06:24] 2025-11-25 12:05:29,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:06:24] 2025-11-25 12:05:29,548 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,709 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,712 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,733 | INFO     | [data] control thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,741 | INFO     | [job] control thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,861 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:29,931 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,038 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:06:24] 2025-11-25 12:05:30,177 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,423 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,457 | INFO     | [payload] control thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,556 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,883 | INFO     | [job] validate thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:30,890 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:31,179 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:33,480 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:06:24] 2025-11-25 12:05:57,245 | INFO     | PID=682493 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 04:06:24] 2025-11-25 12:05:57,245 | INFO     | .. there are 14 such processes running
[2025-11-25 04:06:24] 2025-11-25 12:05:57,246 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:06:24] 2025-11-25 12:05:57,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:06:24] 2025-11-25 12:05:57,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:06:24] 2025-11-25 12:06:17,267 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:06:24] 2025-11-25 12:06:18,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920479459136)>', '<ExcThread(monitor, started 139919498409728)>']
[2025-11-25 04:06:24] 2025-11-25 12:06:19,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:06:24] 2025-11-25 12:06:19,378 | INFO     | [monitor] control thread has ended
[2025-11-25 04:06:24] 2025-11-25 12:06:23,840 | INFO     | all workflow threads have been joined
[2025-11-25 04:06:24] 2025-11-25 12:06:23,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:06:24] 2025-11-25 12:06:23,841 | INFO     | traces error code: 0
[2025-11-25 04:06:24] 2025-11-25 12:06:23,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:06:24] 2025-11-25 12:06:24,065 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:06:24] 2025-11-25 12:06:24,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:06:24] 2025-11-25 12:06:24,073 [wrapper] pilotpid: 682493
[2025-11-25 04:06:24] 2025-11-25 12:06:24,076 [wrapper] Pilot exit status: 0
[2025-11-25 04:06:24] 2025-11-25 12:06:24,093 [wrapper] pandaids: 6896297806
[2025-11-25 04:06:24] 2025-11-25 12:06:24,166 [wrapper] cleanup supervisor_pilot  682499 682494
[2025-11-25 04:06:24] 2025-11-25 12:06:24,170 [wrapper] Test setup, not cleaning
[2025-11-25 04:06:24] 2025-11-25 12:06:24,179 [wrapper] apfmon messages muted
[2025-11-25 04:06:24] 2025-11-25 12:06:24,187 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:06:24] 2025-11-25 12:06:24,193 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:06:24]  *** Error codes and diagnostics ***
[2025-11-25 04:06:24]     "exeErrorCode": 65,
[2025-11-25 04:06:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 04:06:24]     "pilotErrorCode": 1305,
[2025-11-25 04:06:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 04:06:24]  *** Listing of results directory ***
[2025-11-25 04:06:25] total 405220
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc      5112 Nov 24 17:11 queuedata.json
[2025-11-25 04:06:25] -rwx------. 1 boinc boinc     36292 Nov 24 17:13 runpilot2-wrapper.sh
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc    576529 Nov 24 17:13 pilot3.tar.gz
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc       100 Nov 25 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:06:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 03:57 run_atlas
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc       105 Nov 25 03:57 job.xml
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc 410688135 Nov 25 03:57 EVNT.47483658._002074.pool.root.1
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc      6594 Nov 25 03:57 init_data.xml
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:57 start_atlas.sh
[2025-11-25 04:06:25] drwxrwx--x. 2 boinc boinc      4096 Nov 25 03:57 shared
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc    590097 Nov 25 03:57 input.tar.gz
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc         0 Nov 25 03:57 boinc_lockfile
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc      2784 Nov 25 03:57 pandaJob.out
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc    991894 Nov 25 03:58 agis_schedconf.cvmfs.json
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc   1516240 Nov 25 03:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:06:25] drwx------. 5 boinc boinc      4096 Nov 25 03:58 pilot3
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc       524 Nov 25 04:01 boinc_task_state.xml
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc      1014 Nov 25 04:03 memory_monitor_summary.json
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc     50964 Nov 25 04:03 log.47556161._000577.job.log.tgz.1
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc        95 Nov 25 04:05 pilot_heartbeat.json
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc     10342 Nov 25 04:05 heartbeat.json
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc      5008 Nov 25 04:06 pilotlog.txt
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc      8192 Nov 25 04:06 boinc_mmap_file
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc    118633 Nov 25 04:06 log.47556161._000577.job.log.1
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc       186 Nov 25 04:06 output.list
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc       620 Nov 25 04:06 runtime_log
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc    194560 Nov 25 04:06 result.tar.gz
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc      8636 Nov 25 04:06 runtime_log.err
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc       644 Nov 25 04:06 NrQODmNnwh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7GJKDmC6cKMm.diag
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc        23 Nov 25 04:06 wrapper_checkpoint.txt
[2025-11-25 04:06:25] -rw-r--r--. 1 boinc boinc     22543 Nov 25 04:06 stderr.txt
[2025-11-25 04:06:25] No HITS result produced
[2025-11-25 04:06:25]  *** Contents of shared directory: ***
[2025-11-25 04:06:25] total 401856
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc 410688135 Nov 25 03:57 ATLAS.root_0
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:57 start_atlas.sh
[2025-11-25 04:06:25] -rw-r--r--. 2 boinc boinc    590097 Nov 25 03:57 input.tar.gz
[2025-11-25 04:06:25] -rw-------. 1 boinc boinc    194560 Nov 25 04:06 result.tar.gz
04:06:26 (676024): run_atlas exited; CPU time 80.192294
04:06:26 (676024): called boinc_finish(0)

</stderr_txt>
]]>

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