Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:08 (4129951): wrapper (7.7.26015): starting
08:37:08 (4129951): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:37:09] Arguments: --nthreads 8
[2025-11-25 08:37:09] Threads: 8
[2025-11-25 08:37:09] Checking for CVMFS
[2025-11-25 08:37:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:37:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:37:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:37:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:37:10] 2.13.3.0 9428 26983 332848 153284 2 264 10462192 18491393 27054 16776704 0 132271575 99.317 217071348 33410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 08:37:10] CVMFS is ok
[2025-11-25 08:37:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:37:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:37:10] Further information can be found at the LHC@home message board.
[2025-11-25 08:37:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:37:10] Checking for apptainer binary...
[2025-11-25 08:37:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:37:10] Running /usr/bin/apptainer --version
[2025-11-25 08:37:10] apptainer version 1.4.4-1.el9
[2025-11-25 08:37:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:37:10] c-8-38.aglt2.org
[2025-11-25 08:37:10] apptainer works
[2025-11-25 08:37:11] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:37:11] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:37:11] Starting ATLAS job with PandaID=6895673630
[2025-11-25 08:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:03 (4129951): BOINC client no longer exists - exiting
00:20:03 (4129951): timer handler: client dead, exiting
00:29:07 (2634414): wrapper (7.7.26015): starting
00:29:07 (2634414): wrapper: running run_atlas (--nthreads 11)
[2025-11-26 00:29:07] Arguments: --nthreads 11
[2025-11-26 00:29:07] Threads: 11
[2025-11-26 00:29:07] This job has been restarted, cleaning up previous attempt
[2025-11-26 00:29:07] Checking for CVMFS
[2025-11-26 00:29:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:29:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:29:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:29:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:29:08] 2.13.3.0 9428 27935 319896 153311 3 95 17722221 18491393 21343 16776704 0 135993225 99.331 219088674 33405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:29:08] CVMFS is ok
[2025-11-26 00:29:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:29:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:29:08] Further information can be found at the LHC@home message board.
[2025-11-26 00:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:29:08] Checking for apptainer binary...
[2025-11-26 00:29:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:29:08] Running /usr/bin/apptainer --version
[2025-11-26 00:29:08] apptainer version 1.4.4-1.el9
[2025-11-26 00:29:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:29:08] c-8-38.aglt2.org
[2025-11-26 00:29:08] apptainer works
[2025-11-26 00:29:08] Set ATHENA_PROC_NUMBER=11
[2025-11-26 00:29:08] Set ATHENA_CORE_NUMBER=11
[2025-11-26 00:29:08] Starting ATLAS job with PandaID=6895673630
[2025-11-26 00:29:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:45:56 (1995675): wrapper (7.7.26015): starting
17:45:56 (1995675): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 17:45:56] Arguments: --nthreads 10
[2025-11-26 17:45:56] Threads: 10
[2025-11-26 17:45:56] This job has been restarted, cleaning up previous attempt
[2025-11-26 17:45:57] Checking for CVMFS
[2025-11-26 17:45:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:45:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:45:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:45:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:45:57] 2.13.3.0 9428 28972 338120 153337 0 563 17484576 18491392 23229 16776704 0 143175099 99.334 227948206 33314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:45:57] CVMFS is ok
[2025-11-26 17:45:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:45:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:45:57] Further information can be found at the LHC@home message board.
[2025-11-26 17:45:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:45:57] Checking for apptainer binary...
[2025-11-26 17:45:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:45:57] Running /usr/bin/apptainer --version
[2025-11-26 17:45:57] apptainer version 1.4.4-1.el9
[2025-11-26 17:45:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:45:57] c-8-38.aglt2.org
[2025-11-26 17:45:57] apptainer works
[2025-11-26 17:45:57] Set ATHENA_PROC_NUMBER=10
[2025-11-26 17:45:57] Set ATHENA_CORE_NUMBER=10
[2025-11-26 17:45:57] Starting ATLAS job with PandaID=6895673630
[2025-11-26 17:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:13:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:13:14] 2025-11-28 00:12:33,539 | INFO     | time since job start (91586s) is within the limit (172800.0s)
[2025-11-27 19:13:14] 2025-11-28 00:12:35,545 | INFO     | time since job start (91588s) is within the limit (172800.0s)
[2025-11-27 19:13:14] 2025-11-28 00:12:35,654 | INFO     | monitor loop #5415: job 0:6895673630 is in state 'finished'
[2025-11-27 19:13:14] 2025-11-28 00:12:35,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:13:14] 2025-11-28 00:12:37,521 | INFO     | PID=2008718 has CPU usage=17.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 19:13:14] 2025-11-28 00:12:37,521 | INFO     | .. there are 42 such processes running
[2025-11-27 19:13:14] 2025-11-28 00:12:38,160 | INFO     | monitor loop #5416: job 0:6895673630 is in state 'finished'
[2025-11-27 19:13:14] 2025-11-28 00:12:38,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:13:14] 2025-11-28 00:12:38,522 | INFO     | time since job start (91591s) is within the limit (172800.0s)
[2025-11-27 19:13:14] 2025-11-28 00:12:38,556 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:13:14] 2025-11-28 00:12:38,568 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.24725
[2025-11-27 19:13:14] 2025-11-28 00:12:38,700 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895673630/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:13:14] 2025-11-28 00:12:38,708 | INFO     | extracted standard info from prmon json
[2025-11-27 19:13:14] 2025-11-28 00:12:38,708 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:13:14] 2025-11-28 00:12:38,708 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:13:14] 2025-11-28 00:12:38,822 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:13:14] 2025-11-28 00:12:38,846 | INFO     | sum of square deviations: 1048669948676.9204
[2025-11-27 19:13:14] 2025-11-28 00:12:38,961 | INFO     | sum of deviations: 6077387595108.814
[2025-11-27 19:13:14] 2025-11-28 00:12:38,961 | INFO     | mean x: 1764242945.9180546
[2025-11-27 19:13:14] 2025-11-28 00:12:38,961 | INFO     | mean y: 3316158.9660226516
[2025-11-27 19:13:14] 2025-11-28 00:12:38,961 | INFO     | intersect: -10221052535.69169
[2025-11-27 19:13:14] 2025-11-28 00:12:38,967 | INFO     | chi2: 8.480192284379429
[2025-11-27 19:13:14] 2025-11-28 00:12:38,970 | INFO     | sum of square deviations: 1038226884054.2036
[2025-11-27 19:13:14] 2025-11-28 00:12:39,241 | INFO     | sum of deviations: 6679273313942.065
[2025-11-27 19:13:14] 2025-11-28 00:12:39,246 | INFO     | mean x: 1764242793.4278076
[2025-11-27 19:13:14] 2025-11-28 00:12:39,246 | INFO     | mean y: 3324946.806149733
[2025-11-27 19:13:14] 2025-11-28 00:12:39,246 | INFO     | intersect: -11346660292.876537
[2025-11-27 19:13:14] 2025-11-28 00:12:39,248 | INFO     | chi2: 5.075288345665677
[2025-11-27 19:13:14] 2025-11-28 00:12:39,248 | INFO     | current chi2=5.075288345665677 (change=40.15125865701899 %)
[2025-11-27 19:13:14] 2025-11-28 00:12:39,254 | INFO     | sum of square deviations: 1027853402131.1997
[2025-11-27 19:13:14] 2025-11-28 00:12:39,366 | INFO     | sum of deviations: 7013891328185.02
[2025-11-27 19:13:14] 2025-11-28 00:12:39,367 | INFO     | mean x: 1764242640.9376256
[2025-11-27 19:13:14] 2025-11-28 00:12:39,367 | INFO     | mean y: 3329864.978537894
[2025-11-27 19:13:14] 2025-11-28 00:12:39,367 | INFO     | intersect: -12035552464.37834
[2025-11-27 19:13:14] 2025-11-28 00:12:39,373 | INFO     | chi2: 3.844472458694958
[2025-11-27 19:13:14] 2025-11-28 00:12:39,373 | INFO     | current chi2=3.844472458694958 (change=24.25115191773965 %)
[2025-11-27 19:13:14] 2025-11-28 00:12:39,374 | INFO     | right removable region: 1490
[2025-11-27 19:13:14] 2025-11-28 00:12:39,376 | INFO     | sum of square deviations: 1038224669339.4653
[2025-11-27 19:13:14] 2025-11-28 00:12:39,441 | INFO     | sum of deviations: 5635266399052.544
[2025-11-27 19:13:14] 2025-11-28 00:12:39,442 | INFO     | mean x: 1764243098.4244652
[2025-11-27 19:13:14] 2025-11-28 00:12:39,442 | INFO     | mean y: 3322608.2747326205
[2025-11-27 19:13:14] 2025-11-28 00:12:39,442 | INFO     | intersect: -9572620004.066565
[2025-11-27 19:13:14] 2025-11-28 00:12:39,444 | INFO     | chi2: 6.53812300244263
[2025-11-27 19:13:14] 2025-11-28 00:12:39,444 | INFO     | current chi2=6.53812300244263 (change=22.901241113531164 %)
[2025-11-27 19:13:14] 2025-11-28 00:12:39,444 | INFO     | left removable region: 10
[2025-11-27 19:13:14] 2025-11-28 00:12:39,446 | INFO     | sum of square deviations: 1005271091540.6902
[2025-11-27 19:13:14] 2025-11-28 00:12:39,801 | INFO     | sum of deviations: 6445300725036.721
[2025-11-27 19:13:14] 2025-11-28 00:12:39,815 | INFO     | mean x: 1764242915.4527028
[2025-11-27 19:13:14] 2025-11-28 00:12:39,815 | INFO     | mean y: 3339854.9243243244
[2025-11-27 19:13:14] 2025-11-28 00:12:39,815 | INFO     | intersect: -11308112585.910078
[2025-11-27 19:13:14] 2025-11-28 00:12:39,842 | INFO     | chi2: 1.5939466227856278
[2025-11-27 19:13:14] 2025-11-28 00:12:39,842 | INFO     | current memory leak: 6.41 B/s (using 1480 data points, chi2=1.59)
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | could have reported an average CPU frequency of 2600 MHz (53 samples)
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | ..............................
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | . Timing measurements:
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | . get job = 0 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | . initial setup = 2 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,856 | INFO     | . payload setup = 5 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,857 | INFO     | . stage-in = 0 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,857 | INFO     | . payload execution = 91551 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,857 | INFO     | . stage-out = 5 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,857 | INFO     | . log creation = 1 s
[2025-11-27 19:13:14] 2025-11-28 00:12:39,857 | INFO     | ..............................
[2025-11-27 19:13:14] 2025-11-28 00:12:40,575 | INFO     | time since job start (91593s) is within the limit (172800.0s)
[2025-11-27 19:13:14] 2025-11-28 00:12:40,764 | INFO     | 
[2025-11-27 19:13:14] 2025-11-28 00:12:40,769 | INFO     | job summary report
[2025-11-27 19:13:14] 2025-11-28 00:12:40,770 | INFO     | --------------------------------------------------
[2025-11-27 19:13:14] 2025-11-28 00:12:40,770 | INFO     | PanDA job id: 6895673630
[2025-11-27 19:13:14] 2025-11-28 00:12:40,770 | INFO     | task id: 47556149
[2025-11-27 19:13:14] 2025-11-28 00:12:40,770 | INFO     | errors: (none)
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | pilot state: finished 
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | transexitcode: 0
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | exeerrorcode: 0
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | exeerrordiag: 
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | exitcode: 0
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | exitmsg: OK
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | cpuconsumptiontime: 305928 s
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | nevents: 1000
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | neventsw: 0
[2025-11-27 19:13:14] 2025-11-28 00:12:40,771 | INFO     | pid: 2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | pgrp: 2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | corecount: 10
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | event service: False
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | sizes: {0: 2284314, 4: 2284576, 11: 2284604, 91561: 2351926, 91567: 2360920, 91569: 2360976, 91578: 2361446}
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | --------------------------------------------------
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | 
[2025-11-27 19:13:14] 2025-11-28 00:12:40,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 19:13:14] 2025-11-28 00:12:40,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:13:14] 2025-11-28 00:12:40,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:13:14] 2025-11-28 00:12:40,925 | INFO     | job 6895673630 has completed (purged errors)
[2025-11-27 19:13:14] 2025-11-28 00:12:40,925 | INFO     | overall cleanup function is called
[2025-11-27 19:13:14] 2025-11-28 00:12:41,945 | INFO     | --- collectZombieJob: --- 10, [2035943]
[2025-11-27 19:13:14] 2025-11-28 00:12:41,945 | INFO     | zombie collector waiting for pid 2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:41,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:13:14] 2025-11-28 00:12:41,945 | INFO     | collected zombie processes
[2025-11-27 19:13:14] 2025-11-28 00:12:41,945 | INFO     | will attempt to kill all subprocesses of pid=2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:42,757 | INFO     | process IDs to be killed: [2035943] (in reverse order)
[2025-11-27 19:13:14] 2025-11-28 00:12:43,157 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:13:14] 2025-11-28 00:12:43,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:13:14] 2025-11-28 00:12:43,182 | INFO     | did not find any defunct processes belonging to 2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:43,197 | INFO     | did not find any defunct processes belonging to 2035943
[2025-11-27 19:13:14] 2025-11-28 00:12:43,198 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:13:14] 2025-11-28 00:12:43,199 | INFO     | ready for new job
[2025-11-27 19:13:14] 2025-11-28 00:12:43,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:13:14] 2025-11-28 00:12:43,204 | INFO     | ***************************************
[2025-11-27 19:13:14] 2025-11-28 00:12:43,205 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:13:14] 2025-11-28 00:12:43,205 | INFO     | ***************************************
[2025-11-27 19:13:14] 2025-11-28 00:12:43,205 | INFO     | 
[2025-11-27 19:13:14] 2025-11-28 00:12:43,207 | INFO     | architecture information:
[2025-11-27 19:13:14] 2025-11-28 00:12:43,209 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:13:14] 2025-11-28 00:12:43,229 | INFO     | cat /etc/os-release:
[2025-11-27 19:13:14] NAME="CentOS Linux"
[2025-11-27 19:13:14] VERSION="7 (Core)"
[2025-11-27 19:13:14] ID="centos"
[2025-11-27 19:13:14] ID_LIKE="rhel fedora"
[2025-11-27 19:13:14] VERSION_ID="7"
[2025-11-27 19:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:13:14] ANSI_COLOR="0;31"
[2025-11-27 19:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:13:14] HOME_URL="https://www.centos.org/"
[2025-11-27 19:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:13:14] 
[2025-11-27 19:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:13:14] 
[2025-11-27 19:13:14] 2025-11-28 00:12:43,229 | INFO     | ***************************************
[2025-11-27 19:13:14] 2025-11-28 00:12:43,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 19:13:14] 2025-11-28 00:12:43,759 | INFO     | sufficient remaining disk space (93285515264 B)
[2025-11-27 19:13:14] 2025-11-28 00:12:43,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:13:14] 2025-11-28 00:12:43,760 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:13:14] 2025-11-28 00:12:43,760 | INFO     | update_server=False
[2025-11-27 19:13:14] 2025-11-28 00:12:43,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:13:14] 2025-11-28 00:12:43,978 | INFO     | all data control threads have been joined
[2025-11-27 19:13:14] 2025-11-28 00:12:44,183 | INFO     | all job control threads have been joined
[2025-11-27 19:13:14] 2025-11-28 00:12:44,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:13:14] 2025-11-28 00:12:44,233 | INFO     | aborting loop
[2025-11-27 19:13:14] 2025-11-28 00:12:44,767 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:44,833 | INFO     | all payload control threads have been joined
[2025-11-27 19:13:14] 2025-11-28 00:12:44,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:13:14] 2025-11-28 00:12:44,968 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:44,985 | INFO     | [data] control thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,189 | INFO     | [job] control thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,221 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,239 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,581 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,595 | INFO     | [job] validate thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:13:14] 2025-11-28 00:12:45,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,820 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,839 | INFO     | [payload] control thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,854 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:45,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:13:14] 2025-11-28 00:12:45,947 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:46,691 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:46,974 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:49,901 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:13:14] 2025-11-28 00:12:55,696 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:13:14] 2025-11-28 00:12:57,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219007883072)>', '<ExcThread(monitor, started 140218518722304)>']
[2025-11-27 19:13:14] 2025-11-28 00:13:02,199 | INFO     | all workflow threads have been joined
[2025-11-27 19:13:14] 2025-11-28 00:13:02,199 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:13:14] 2025-11-28 00:13:02,199 | INFO     | traces error code: 0
[2025-11-27 19:13:14] 2025-11-28 00:13:02,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:13:14] 2025-11-28 00:13:14,272 | INFO     | PID=2008718 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:13:14] 2025-11-28 00:13:14,272 | INFO     | .. there are 42 such processes running
[2025-11-27 19:13:14] 2025-11-28 00:13:14,273 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:13:14] 2025-11-28 00:13:14,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:13:14] 2025-11-28 00:13:14,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:13:14] 2025-11-28 00:13:14,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:13:14] 2025-11-28 00:13:14,273 | INFO     | [monitor] control thread has ended
[2025-11-27 19:13:14] 2025-11-28 00:13:14,477 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:13:14] 2025-11-28 00:13:14,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:13:14] 2025-11-28 00:13:14,482 [wrapper] pilotpid: 2008718
[2025-11-27 19:13:14] 2025-11-28 00:13:14,485 [wrapper] Pilot exit status: 0
[2025-11-27 19:13:14] 2025-11-28 00:13:14,497 [wrapper] pandaids: 6895673630 6895673630 6895673630
[2025-11-27 19:13:14] 2025-11-28 00:13:14,581 [wrapper] cleanup supervisor_pilot 2207753 2008719
[2025-11-27 19:13:14] 2025-11-28 00:13:14,584 [wrapper] Test setup, not cleaning
[2025-11-27 19:13:14] 2025-11-28 00:13:14,587 [wrapper] apfmon messages muted
[2025-11-27 19:13:14] 2025-11-28 00:13:14,590 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:13:14] 2025-11-28 00:13:14,592 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:13:14]  *** Error codes and diagnostics ***
[2025-11-27 19:13:14]     "exeErrorCode": 0,
[2025-11-27 19:13:14]     "exeErrorDiag": "",
[2025-11-27 19:13:14]     "pilotErrorCode": 0,
[2025-11-27 19:13:14]     "pilotErrorDiag": "",
[2025-11-27 19:13:14]  *** Listing of results directory ***
[2025-11-27 19:13:14] total 1722612
[2025-11-27 19:13:14] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 07:18 pilot3.tar.gz
[2025-11-27 19:13:14] -rwx------. 1 boincer umatlas     36292 Nov 24 07:56 runpilot2-wrapper.sh
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 07:56 queuedata.json
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas       100 Nov 25 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:13:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 08:37 run_atlas
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas       105 Nov 25 08:37 job.xml
[2025-11-27 19:13:14] -rw-r--r--. 3 boincer umatlas 407846090 Nov 25 08:37 EVNT.47483658._001344.pool.root.1
[2025-11-27 19:13:14] -rw-r--r--. 3 boincer umatlas 407846090 Nov 25 08:37 ATLAS.root_0
[2025-11-27 19:13:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:37 start_atlas.sh
[2025-11-27 19:13:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 08:37 shared
[2025-11-27 19:13:14] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 08:37 input.tar.gz
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas         0 Nov 25 08:37 boinc_lockfile
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 17:45 pandaJob.out
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas        57 Nov 26 17:45 setup.sh.local
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas    991546 Nov 26 17:46 agis_schedconf.cvmfs.json
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas       534 Nov 27 18:45 boinc_task_state.xml
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas      6664 Nov 27 19:10 init_data.xml
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas 916060789 Nov 27 19:11 HITS.47556149._003305.pool.root.1
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas      1068 Nov 27 19:12 memory_monitor_summary.json
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas   2709471 Nov 27 19:12 log.47556149._003305.job.log.tgz.1
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas      8633 Nov 27 19:12 heartbeat.json
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:13 boinc_mmap_file
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas        30 Nov 27 19:13 wrapper_checkpoint.txt
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas       823 Nov 27 19:13 pilotlog.txt
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas        96 Nov 27 19:13 pilot_heartbeat.json
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas  11431916 Nov 27 19:13 log.47556149._003305.job.log.1
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas       353 Nov 27 19:13 output.list
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:13 runtime_log
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas  14161920 Nov 27 19:13 result.tar.gz
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas       912 Nov 27 19:13 zcyLDmMIlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvgLKDm4Tzg5m.diag
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas      9420 Nov 27 19:13 runtime_log.err
[2025-11-27 19:13:14] -rw-r--r--. 1 boincer umatlas     26050 Nov 27 19:13 stderr.txt
[2025-11-27 19:13:14] HITS file was successfully produced:
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas 916060789 Nov 27 19:11 shared/HITS.pool.root.1
[2025-11-27 19:13:14]  *** Contents of shared directory: ***
[2025-11-27 19:13:14] total 1307312
[2025-11-27 19:13:14] -rw-r--r--. 3 boincer umatlas 407846090 Nov 25 08:37 ATLAS.root_0
[2025-11-27 19:13:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:37 start_atlas.sh
[2025-11-27 19:13:14] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 08:37 input.tar.gz
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas 916060789 Nov 27 19:11 HITS.pool.root.1
[2025-11-27 19:13:14] -rw-------. 1 boincer umatlas  14161920 Nov 27 19:13 result.tar.gz
19:13:15 (1995675): run_atlas exited; CPU time 309512.017606
19:13:15 (1995675): called boinc_finish(0)

</stderr_txt>
]]>

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