Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:02:55 (3747): wrapper (7.7.26015): starting
07:02:55 (3747): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 07:02:55] Arguments: --nthreads 9
[2025-11-25 07:02:55] Threads: 9
[2025-11-25 07:02:55] Checking for CVMFS
[2025-11-25 07:02:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:02:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:02:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:02:56] 2.13.3.0 7558 28585 340236 153281 2 359 22326762 32935936 25509 16776704 0 117683216 99.517 148306758 38533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 07:02:56] CVMFS is ok
[2025-11-25 07:02:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:02:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:02:56] Further information can be found at the LHC@home message board.
[2025-11-25 07:02:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:02:56] Checking for apptainer binary...
[2025-11-25 07:02:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:02:56] Running /usr/bin/apptainer --version
[2025-11-25 07:02:57] apptainer version 1.4.4-1.el9
[2025-11-25 07:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:02:57] c6-6-39-2.aglt2.org
[2025-11-25 07:02:57] apptainer works
[2025-11-25 07:02:57] Set ATHENA_PROC_NUMBER=9
[2025-11-25 07:02:57] Set ATHENA_CORE_NUMBER=9
[2025-11-25 07:02:57] Starting ATLAS job with PandaID=6895673653
[2025-11-25 07:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:15:13]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:15:13] 2025-11-26 04:14:39,213 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2980.7411607142853
[2025-11-25 23:15:13] 2025-11-26 04:14:39,226 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895673653/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,226 | INFO     | extracted standard info from prmon json
[2025-11-25 23:15:13] 2025-11-26 04:14:39,227 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:15:13] 2025-11-26 04:14:39,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:15:13] 2025-11-26 04:14:39,247 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:15:13] 2025-11-26 04:14:39,249 | INFO     | sum of square deviations: 269214986520.12167
[2025-11-25 23:15:13] 2025-11-26 04:14:39,264 | INFO     | monitor loop #3675: job 0:6895673653 is in state 'finished'
[2025-11-25 23:15:13] 2025-11-26 04:14:39,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,273 | INFO     | sum of deviations: 2351525807113.7725
[2025-11-25 23:15:13] 2025-11-26 04:14:39,274 | INFO     | mean x: 1764101346.0849056
[2025-11-25 23:15:13] 2025-11-26 04:14:39,274 | INFO     | mean y: 3056645.817610063
[2025-11-25 23:15:13] 2025-11-26 04:14:39,274 | INFO     | intersect: -15405928921.086353
[2025-11-25 23:15:13] 2025-11-26 04:14:39,276 | INFO     | chi2: 5.841101848470735
[2025-11-25 23:15:13] 2025-11-26 04:14:39,277 | INFO     | sum of square deviations: 265004419874.9976
[2025-11-25 23:15:13] 2025-11-26 04:14:39,302 | INFO     | sum of deviations: 2626615341971.81
[2025-11-25 23:15:13] 2025-11-26 04:14:39,302 | INFO     | mean x: 1764101193.593256
[2025-11-25 23:15:13] 2025-11-26 04:14:39,303 | INFO     | mean y: 3066603.0642781877
[2025-11-25 23:15:13] 2025-11-26 04:14:39,303 | INFO     | intersect: -17481982371.09435
[2025-11-25 23:15:13] 2025-11-26 04:14:39,305 | INFO     | chi2: 3.599626680611858
[2025-11-25 23:15:13] 2025-11-26 04:14:39,305 | INFO     | current chi2=3.599626680611858 (change=38.374183946916105 %)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,307 | INFO     | sum of square deviations: 260837935827.43982
[2025-11-25 23:15:13] 2025-11-26 04:14:39,330 | INFO     | sum of deviations: 2686950854378.029
[2025-11-25 23:15:13] 2025-11-26 04:14:39,330 | INFO     | mean x: 1764101041.1006355
[2025-11-25 23:15:13] 2025-11-26 04:14:39,330 | INFO     | mean y: 3068802.7891949154
[2025-11-25 23:15:13] 2025-11-26 04:14:39,330 | INFO     | intersect: -18169336927.067356
[2025-11-25 23:15:13] 2025-11-26 04:14:39,331 | INFO     | chi2: 3.2439267507802776
[2025-11-25 23:15:13] 2025-11-26 04:14:39,331 | INFO     | current chi2=3.2439267507802776 (change=9.881578324425558 %)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,332 | INFO     | right removable region: 943
[2025-11-25 23:15:13] 2025-11-26 04:14:39,333 | INFO     | sum of square deviations: 265003497554.99753
[2025-11-25 23:15:13] 2025-11-26 04:14:39,345 | INFO     | sum of deviations: 2005825631994.1936
[2025-11-25 23:15:13] 2025-11-26 04:14:39,346 | INFO     | mean x: 1764101498.593256
[2025-11-25 23:15:13] 2025-11-26 04:14:39,346 | INFO     | mean y: 3069156.8113804003
[2025-11-25 23:15:13] 2025-11-26 04:14:39,346 | INFO     | intersect: -13349509341.075663
[2025-11-25 23:15:13] 2025-11-26 04:14:39,347 | INFO     | chi2: 2.8027236662958632
[2025-11-25 23:15:13] 2025-11-26 04:14:39,347 | INFO     | current chi2=2.8027236662958632 (change=52.01720944089261 %)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,348 | INFO     | sum of square deviations: 260836553942.60925
[2025-11-25 23:15:13] 2025-11-26 04:14:39,371 | INFO     | sum of deviations: 1921926768140.783
[2025-11-25 23:15:13] 2025-11-26 04:14:39,371 | INFO     | mean x: 1764101651.0942798
[2025-11-25 23:15:13] 2025-11-26 04:14:39,371 | INFO     | mean y: 3072226.440677966
[2025-11-25 23:15:13] 2025-11-26 04:14:39,372 | INFO     | intersect: -12995390349.879969
[2025-11-25 23:15:13] 2025-11-26 04:14:39,373 | INFO     | chi2: 2.726501368261083
[2025-11-25 23:15:13] 2025-11-26 04:14:39,373 | INFO     | current chi2=2.726501368261083 (change=2.719579491599233 %)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,373 | INFO     | left removable region: 20
[2025-11-25 23:15:13] 2025-11-26 04:14:39,375 | INFO     | sum of square deviations: 243813222975.14404
[2025-11-25 23:15:13] 2025-11-26 04:14:39,394 | INFO     | sum of deviations: 2140221427504.406
[2025-11-25 23:15:13] 2025-11-26 04:14:39,394 | INFO     | mean x: 1764101620.6121345
[2025-11-25 23:15:13] 2025-11-26 04:14:39,394 | INFO     | mean y: 3088705.570964247
[2025-11-25 23:15:13] 2025-11-26 04:14:39,394 | INFO     | intersect: -15482404831.890888
[2025-11-25 23:15:13] 2025-11-26 04:14:39,395 | INFO     | chi2: 0.07925324577511211
[2025-11-25 23:15:13] 2025-11-26 04:14:39,396 | INFO     | current memory leak: 8.78 B/s (using 923 data points, chi2=0.08)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | could have reported an average CPU frequency of 2942 MHz (35 samples)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | ..............................
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . Timing measurements:
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . get job = 0 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . initial setup = 3 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . payload setup = 18 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . stage-in = 0 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . payload execution = 58202 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . stage-out = 3 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | . log creation = 0 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,397 | INFO     | ..............................
[2025-11-25 23:15:13] 2025-11-26 04:14:39,489 | INFO     | 
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | job summary report
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | --------------------------------------------------
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | PanDA job id: 6895673653
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | task id: 47556161
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | errors: (none)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | pilot state: finished 
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | transexitcode: 0
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | exeerrorcode: 0
[2025-11-25 23:15:13] 2025-11-26 04:14:39,490 | INFO     | exeerrordiag: 
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | exitcode: 0
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | exitmsg: OK
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | cpuconsumptiontime: 253339 s
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | nevents: 1000
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | neventsw: 0
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | pid: 24122
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | pgrp: 24122
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | corecount: 9
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | event service: False
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | sizes: {0: 2284312, 11: 2284312, 13: 2284602, 22: 2284658, 58225: 2336909, 58229: 2346087, 58234: 2346277}
[2025-11-25 23:15:13] 2025-11-26 04:14:39,491 | INFO     | --------------------------------------------------
[2025-11-25 23:15:13] 2025-11-26 04:14:39,492 | INFO     | 
[2025-11-25 23:15:13] 2025-11-26 04:14:39,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:15:13] 2025-11-26 04:14:39,515 | INFO     | job 6895673653 has completed (purged errors)
[2025-11-25 23:15:13] 2025-11-26 04:14:39,515 | INFO     | overall cleanup function is called
[2025-11-25 23:15:13] 2025-11-26 04:14:40,528 | INFO     | --- collectZombieJob: --- 10, [24122]
[2025-11-25 23:15:13] 2025-11-26 04:14:40,528 | INFO     | zombie collector waiting for pid 24122
[2025-11-25 23:15:13] 2025-11-26 04:14:40,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:15:13] 2025-11-26 04:14:40,529 | INFO     | collected zombie processes
[2025-11-25 23:15:13] 2025-11-26 04:14:40,530 | INFO     | will attempt to kill all subprocesses of pid=24122
[2025-11-25 23:15:13] 2025-11-26 04:14:40,891 | INFO     | process IDs to be killed: [24122] (in reverse order)
[2025-11-25 23:15:13] 2025-11-26 04:14:41,034 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:15:13] 2025-11-26 04:14:41,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:15:13] 2025-11-26 04:14:41,048 | INFO     | did not find any defunct processes belonging to 24122
[2025-11-25 23:15:13] 2025-11-26 04:14:41,062 | INFO     | did not find any defunct processes belonging to 24122
[2025-11-25 23:15:13] 2025-11-26 04:14:41,064 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:15:13] 2025-11-26 04:14:41,064 | INFO     | ready for new job
[2025-11-25 23:15:13] 2025-11-26 04:14:41,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:15:13] 2025-11-26 04:14:41,070 | INFO     | ***************************************
[2025-11-25 23:15:13] 2025-11-26 04:14:41,070 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:15:13] 2025-11-26 04:14:41,070 | INFO     | ***************************************
[2025-11-25 23:15:13] 2025-11-26 04:14:41,070 | INFO     | 
[2025-11-25 23:15:13] 2025-11-26 04:14:41,073 | INFO     | architecture information:
[2025-11-25 23:15:13] 2025-11-26 04:14:41,074 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:15:13] 2025-11-26 04:14:41,101 | INFO     | cat /etc/os-release:
[2025-11-25 23:15:13] NAME="CentOS Linux"
[2025-11-25 23:15:13] VERSION="7 (Core)"
[2025-11-25 23:15:13] ID="centos"
[2025-11-25 23:15:13] ID_LIKE="rhel fedora"
[2025-11-25 23:15:13] VERSION_ID="7"
[2025-11-25 23:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:15:13] ANSI_COLOR="0;31"
[2025-11-25 23:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:15:13] HOME_URL="https://www.centos.org/"
[2025-11-25 23:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:15:13] 
[2025-11-25 23:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:15:13] 
[2025-11-25 23:15:13] 2025-11-26 04:14:41,103 | INFO     | ***************************************
[2025-11-25 23:15:13] 2025-11-26 04:14:41,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 23:15:13] 2025-11-26 04:14:41,628 | INFO     | sufficient remaining disk space (71155318784 B)
[2025-11-25 23:15:13] 2025-11-26 04:14:41,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:15:13] 2025-11-26 04:14:41,630 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:15:13] 2025-11-26 04:14:41,630 | INFO     | update_server=False
[2025-11-25 23:15:13] 2025-11-26 04:14:41,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:15:13] 2025-11-26 04:14:41,719 | INFO     | all job control threads have been joined
[2025-11-25 23:15:13] 2025-11-26 04:14:41,770 | INFO     | all payload control threads have been joined
[2025-11-25 23:15:13] 2025-11-26 04:14:41,778 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 23:15:13] 2025-11-26 04:14:41,778 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 23:15:13] 2025-11-26 04:14:41,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:15:13] 2025-11-26 04:14:41,778 | INFO     | will abort loop
[2025-11-25 23:15:13] 2025-11-26 04:14:42,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:15:13] 2025-11-26 04:14:42,245 | INFO     | all data control threads have been joined
[2025-11-25 23:15:13] 2025-11-26 04:14:42,635 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,720 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,724 | INFO     | [job] control thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,771 | INFO     | [payload] control thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,783 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,798 | INFO     | [job] validate thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:42,826 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,191 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,242 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,250 | INFO     | [data] control thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,256 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,717 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:43,743 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:44,061 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:44,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:15:13] 2025-11-26 04:14:44,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:15:13] 2025-11-26 04:14:45,505 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:14:48,662 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:15:13] 2025-11-26 04:15:07,062 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:15:13] 2025-11-26 04:15:08,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033926813504)>', '<ExcThread(monitor, started 140032836888320)>']
[2025-11-25 23:15:13] 2025-11-26 04:15:11,504 | INFO     | PID=10871 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:15:13] 2025-11-26 04:15:11,504 | INFO     | .. there are 38 such processes running
[2025-11-25 23:15:13] 2025-11-26 04:15:11,505 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:15:13] 2025-11-26 04:15:11,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:15:13] 2025-11-26 04:15:11,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:15:13] 2025-11-26 04:15:11,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:15:13] 2025-11-26 04:15:11,505 | INFO     | [monitor] control thread has ended
[2025-11-25 23:15:13] 2025-11-26 04:15:13,317 | INFO     | all workflow threads have been joined
[2025-11-25 23:15:13] 2025-11-26 04:15:13,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:15:13] 2025-11-26 04:15:13,317 | INFO     | traces error code: 0
[2025-11-25 23:15:13] 2025-11-26 04:15:13,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:15:13] 2025-11-26 04:15:13,520 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:15:13] 2025-11-26 04:15:13,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:15:13] 2025-11-26 04:15:13,532 [wrapper] pilotpid: 10871
[2025-11-25 23:15:13] 2025-11-26 04:15:13,536 [wrapper] Pilot exit status: 0
[2025-11-25 23:15:13] 2025-11-26 04:15:13,554 [wrapper] pandaids: 6895673653
[2025-11-25 23:15:13] 2025-11-26 04:15:13,647 [wrapper] cleanup supervisor_pilot 3558091 10872
[2025-11-25 23:15:13] 2025-11-26 04:15:13,655 [wrapper] Test setup, not cleaning
[2025-11-25 23:15:13] 2025-11-26 04:15:13,662 [wrapper] apfmon messages muted
[2025-11-25 23:15:13] 2025-11-26 04:15:13,667 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:15:13] 2025-11-26 04:15:13,673 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:15:13]  *** Error codes and diagnostics ***
[2025-11-25 23:15:13]     "exeErrorCode": 0,
[2025-11-25 23:15:13]     "exeErrorDiag": "",
[2025-11-25 23:15:13]     "pilotErrorCode": 0,
[2025-11-25 23:15:13]     "pilotErrorDiag": "",
[2025-11-25 23:15:13]  *** Listing of results directory ***
[2025-11-25 23:15:13] total 1328128
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 07:18 pilot3.tar.gz
[2025-11-25 23:15:13] -rwx------. 1 boincer umatlas     36292 Nov 24 08:07 runpilot2-wrapper.sh
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 08:07 queuedata.json
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas       100 Nov 25 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:15:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 07:02 run_atlas
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas       105 Nov 25 07:02 job.xml
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas 406541839 Nov 25 07:02 EVNT.47483658._002045.pool.root.1
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 07:02 start_atlas.sh
[2025-11-25 23:15:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 07:02 shared
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas    590094 Nov 25 07:02 input.tar.gz
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas         0 Nov 25 07:02 boinc_lockfile
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 07:02 pandaJob.out
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas        57 Nov 25 07:02 setup.sh.local
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas    991894 Nov 25 07:03 agis_schedconf.cvmfs.json
[2025-11-25 23:15:13] drwx------. 5 boincer umatlas      4096 Nov 25 07:03 pilot3
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:05 boinc_task_state.xml
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas      6844 Nov 25 23:13 init_data.xml
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas 929959681 Nov 25 23:13 HITS.47556161._000284.pool.root.1
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas      1068 Nov 25 23:14 memory_monitor_summary.json
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas        95 Nov 25 23:14 pilot_heartbeat.json
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas   2232813 Nov 25 23:14 log.47556161._000284.job.log.tgz.1
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas      8634 Nov 25 23:14 heartbeat.json
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:15 boinc_mmap_file
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:15 wrapper_checkpoint.txt
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas      5008 Nov 25 23:15 pilotlog.txt
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas   7555798 Nov 25 23:15 log.47556161._000284.job.log.1
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas       353 Nov 25 23:15 output.list
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:15 runtime_log
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas   9809920 Nov 25 23:15 result.tar.gz
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 23:15 runtime_log.err
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas       665 Nov 25 23:15 dqSMDmlSlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmShLKDmSVxXFn.diag
[2025-11-25 23:15:13] -rw-r--r--. 1 boincer umatlas     21321 Nov 25 23:15 stderr.txt
[2025-11-25 23:15:13] HITS file was successfully produced:
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas 929959681 Nov 25 23:13 shared/HITS.pool.root.1
[2025-11-25 23:15:13]  *** Contents of shared directory: ***
[2025-11-25 23:15:13] total 1315364
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas 406541839 Nov 25 07:02 ATLAS.root_0
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 07:02 start_atlas.sh
[2025-11-25 23:15:13] -rw-r--r--. 2 boincer umatlas    590094 Nov 25 07:02 input.tar.gz
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas 929959681 Nov 25 23:13 HITS.pool.root.1
[2025-11-25 23:15:13] -rw-------. 1 boincer umatlas   9809920 Nov 25 23:15 result.tar.gz
23:15:15 (3747): run_atlas exited; CPU time 254642.067358
23:15:15 (3747): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN