Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:56:39 (190389): wrapper (7.7.26015): starting
10:56:39 (190389): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 10:56:39] Arguments: --nthreads 8
[2025-11-25 10:56:39] Threads: 8
[2025-11-25 10:56:39] Checking for CVMFS
[2025-11-25 10:56:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:56:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:56:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:56:41] 2.13.2.0 7156 34107 233400 153287 0 518 38558592 40960000 33022 16776704 0 152708459 99.668 139651417 38398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 10:56:41] CVMFS is ok
[2025-11-25 10:56:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:56:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:56:41] Further information can be found at the LHC@home message board.
[2025-11-25 10:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:56:41] Checking for apptainer binary...
[2025-11-25 10:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:56:41] Running /usr/bin/apptainer --version
[2025-11-25 10:56:41] apptainer version 1.4.4-1.el9
[2025-11-25 10:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:56:41] c-212-18.aglt2.org
[2025-11-25 10:56:41] apptainer works
[2025-11-25 10:56:41] Set ATHENA_PROC_NUMBER=8
[2025-11-25 10:56:41] Set ATHENA_CORE_NUMBER=8
[2025-11-25 10:56:41] Starting ATLAS job with PandaID=6895375014
[2025-11-25 10:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:20:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:20:48] 2025-11-26 07:19:45,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:20:48] 2025-11-26 07:19:45,761 | INFO     | time since job start (55363s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:47,767 | INFO     | time since job start (55365s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:48,022 | INFO     | monitor loop #3452: job 0:6895375014 is in state 'finished'
[2025-11-26 02:20:48] 2025-11-26 07:19:48,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:20:48] 2025-11-26 07:19:49,792 | INFO     | time since job start (55367s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:50,532 | INFO     | monitor loop #3453: job 0:6895375014 is in state 'finished'
[2025-11-26 02:20:48] 2025-11-26 07:19:50,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:20:48] 2025-11-26 07:19:51,800 | INFO     | time since job start (55369s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:53,035 | INFO     | monitor loop #3454: job 0:6895375014 is in state 'finished'
[2025-11-26 02:20:48] 2025-11-26 07:19:53,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:20:48] 2025-11-26 07:19:53,823 | INFO     | time since job start (55371s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:55,555 | INFO     | monitor loop #3455: job 0:6895375014 is in state 'finished'
[2025-11-26 02:20:48] 2025-11-26 07:19:55,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:20:48] 2025-11-26 07:19:55,830 | INFO     | time since job start (55373s) is within the limit (172800.0s)
[2025-11-26 02:20:48] 2025-11-26 07:19:56,947 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:20:48] 2025-11-26 07:19:57,010 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3339.382968749999
[2025-11-26 02:20:48] 2025-11-26 07:19:57,024 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895375014/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,025 | INFO     | extracted standard info from prmon json
[2025-11-26 02:20:48] 2025-11-26 07:19:57,025 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:20:48] 2025-11-26 07:19:57,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:20:48] 2025-11-26 07:19:57,188 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:20:48] 2025-11-26 07:19:57,193 | INFO     | sum of square deviations: 231357244097.71808
[2025-11-26 02:20:48] 2025-11-26 07:19:57,226 | INFO     | sum of deviations: 480868560558.8983
[2025-11-26 02:20:48] 2025-11-26 07:19:57,227 | INFO     | mean x: 1764113897.0176406
[2025-11-26 02:20:48] 2025-11-26 07:19:57,227 | INFO     | mean y: 2813554.131201764
[2025-11-26 02:20:48] 2025-11-26 07:19:57,227 | INFO     | intersect: -3663840211.6896043
[2025-11-26 02:20:48] 2025-11-26 07:19:57,228 | INFO     | chi2: 25.25893196220614
[2025-11-26 02:20:48] 2025-11-26 07:19:57,230 | INFO     | sum of square deviations: 227552512274.75128
[2025-11-26 02:20:48] 2025-11-26 07:19:57,248 | INFO     | sum of deviations: 809096957892.177
[2025-11-26 02:20:48] 2025-11-26 07:19:57,248 | INFO     | mean x: 1764113744.5288248
[2025-11-26 02:20:48] 2025-11-26 07:19:57,248 | INFO     | mean y: 2826704.5509977825
[2025-11-26 02:20:48] 2025-11-26 07:19:57,248 | INFO     | intersect: -6269743304.918521
[2025-11-26 02:20:48] 2025-11-26 07:19:57,249 | INFO     | chi2: 21.019387397372796
[2025-11-26 02:20:48] 2025-11-26 07:19:57,249 | INFO     | current chi2=21.019387397372796 (change=16.78433819441295 %)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,249 | INFO     | right removable region: 901
[2025-11-26 02:20:48] 2025-11-26 07:19:57,250 | INFO     | sum of square deviations: 227551395974.75122
[2025-11-26 02:20:48] 2025-11-26 07:19:57,263 | INFO     | sum of deviations: 152897450406.961
[2025-11-26 02:20:48] 2025-11-26 07:19:57,263 | INFO     | mean x: 1764114049.5288248
[2025-11-26 02:20:48] 2025-11-26 07:19:57,263 | INFO     | mean y: 2826695.0399113083
[2025-11-26 02:20:48] 2025-11-26 07:19:57,263 | INFO     | intersect: -1182525472.300716
[2025-11-26 02:20:48] 2025-11-26 07:19:57,264 | INFO     | chi2: 21.905778826598567
[2025-11-26 02:20:48] 2025-11-26 07:19:57,264 | INFO     | current chi2=21.905778826598567 (change=13.275118443743994 %)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,264 | INFO     | left removable region: 10
[2025-11-26 02:20:48] 2025-11-26 07:19:57,265 | INFO     | sum of square deviations: 219327221263.41425
[2025-11-26 02:20:48] 2025-11-26 07:19:57,278 | INFO     | sum of deviations: 381164472329.8517
[2025-11-26 02:20:48] 2025-11-26 07:19:57,278 | INFO     | mean x: 1764114019.053872
[2025-11-26 02:20:48] 2025-11-26 07:19:57,279 | INFO     | mean y: 2848472.4197530863
[2025-11-26 02:20:48] 2025-11-26 07:19:57,279 | INFO     | intersect: -3062970650.847133
[2025-11-26 02:20:48] 2025-11-26 07:19:57,279 | INFO     | chi2: 16.15848340848156
[2025-11-26 02:20:48] 2025-11-26 07:19:57,280 | INFO     | current memory leak: 1.74 B/s (using 891 data points, chi2=16.16)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | could have reported an average CPU frequency of 3281 MHz (34 samples)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | ..............................
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . Timing measurements:
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . get job = 0 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . initial setup = 4 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . payload setup = 10 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . stage-in = 0 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . payload execution = 55324 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . stage-out = 5 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | . log creation = 0 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,281 | INFO     | ..............................
[2025-11-26 02:20:48] 2025-11-26 07:19:57,658 | INFO     | 
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | job summary report
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | --------------------------------------------------
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | PanDA job id: 6895375014
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | task id: 47556137
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | errors: (none)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | pilot state: finished 
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | transexitcode: 0
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | exeerrorcode: 0
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | exeerrordiag: 
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | exitcode: 0
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | exitmsg: OK
[2025-11-26 02:20:48] 2025-11-26 07:19:57,659 | INFO     | cpuconsumptiontime: 194266 s
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | nevents: 1000
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | neventsw: 0
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | pid: 200626
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | pgrp: 200626
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | corecount: 8
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | event service: False
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | sizes: {0: 2284264, 9: 2284526, 11: 2284554, 55336: 2335905, 55342: 2344955, 55356: 2345145}
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | --------------------------------------------------
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | 
[2025-11-26 02:20:48] 2025-11-26 07:19:57,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | job 6895375014 has completed (purged errors)
[2025-11-26 02:20:48] 2025-11-26 07:19:57,680 | INFO     | overall cleanup function is called
[2025-11-26 02:20:48] 2025-11-26 07:19:58,700 | INFO     | --- collectZombieJob: --- 10, [200626]
[2025-11-26 02:20:48] 2025-11-26 07:19:58,700 | INFO     | zombie collector waiting for pid 200626
[2025-11-26 02:20:48] 2025-11-26 07:19:58,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:20:48] 2025-11-26 07:19:58,701 | INFO     | collected zombie processes
[2025-11-26 02:20:48] 2025-11-26 07:19:58,701 | INFO     | will attempt to kill all subprocesses of pid=200626
[2025-11-26 02:20:48] 2025-11-26 07:19:59,542 | INFO     | process IDs to be killed: [200626] (in reverse order)
[2025-11-26 02:20:48] 2025-11-26 07:19:59,703 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:20:48] 2025-11-26 07:19:59,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:20:48] 2025-11-26 07:19:59,728 | INFO     | did not find any defunct processes belonging to 200626
[2025-11-26 02:20:48] 2025-11-26 07:19:59,773 | INFO     | did not find any defunct processes belonging to 200626
[2025-11-26 02:20:48] 2025-11-26 07:19:59,774 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:20:48] 2025-11-26 07:19:59,774 | INFO     | ready for new job
[2025-11-26 02:20:48] 2025-11-26 07:19:59,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:20:48] 2025-11-26 07:19:59,779 | INFO     | ***************************************
[2025-11-26 02:20:48] 2025-11-26 07:19:59,779 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:20:48] 2025-11-26 07:19:59,779 | INFO     | ***************************************
[2025-11-26 02:20:48] 2025-11-26 07:19:59,779 | INFO     | 
[2025-11-26 02:20:48] 2025-11-26 07:19:59,784 | INFO     | architecture information:
[2025-11-26 02:20:48] 2025-11-26 07:19:59,785 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:20:48] 2025-11-26 07:19:59,805 | INFO     | cat /etc/os-release:
[2025-11-26 02:20:48] NAME="CentOS Linux"
[2025-11-26 02:20:48] VERSION="7 (Core)"
[2025-11-26 02:20:48] ID="centos"
[2025-11-26 02:20:48] ID_LIKE="rhel fedora"
[2025-11-26 02:20:48] VERSION_ID="7"
[2025-11-26 02:20:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:20:48] ANSI_COLOR="0;31"
[2025-11-26 02:20:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:20:48] HOME_URL="https://www.centos.org/"
[2025-11-26 02:20:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:20:48] 
[2025-11-26 02:20:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:20:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:20:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:20:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:20:48] 
[2025-11-26 02:20:48] 2025-11-26 07:19:59,806 | INFO     | ***************************************
[2025-11-26 02:20:48] 2025-11-26 07:20:00,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | INFO     | sufficient remaining disk space (117879865344 B)
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | INFO     | update_server=False
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:20:48] 2025-11-26 07:20:00,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:20:48] 2025-11-26 07:20:00,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 02:20:48] 2025-11-26 07:20:00,636 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 02:20:48] 2025-11-26 07:20:00,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:20:48] 2025-11-26 07:20:00,636 | INFO     | will abort loop
[2025-11-26 02:20:48] 2025-11-26 07:20:00,794 | INFO     | all payload control threads have been joined
[2025-11-26 02:20:48] 2025-11-26 07:20:01,220 | INFO     | all data control threads have been joined
[2025-11-26 02:20:48] 2025-11-26 07:20:01,364 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,537 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,582 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,587 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,642 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:20:48] 2025-11-26 07:20:01,799 | INFO     | [payload] control thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,875 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:01,929 | INFO     | all job control threads have been joined
[2025-11-26 02:20:48] 2025-11-26 07:20:02,021 | INFO     | [job] validate thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:02,227 | INFO     | [data] control thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:02,539 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:02,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:20:48] 2025-11-26 07:20:02,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:02,940 | INFO     | [job] control thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:03,696 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:03,780 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:04,371 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:20:48] 2025-11-26 07:20:29,839 | INFO     | PID=194194 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 02:20:48] 2025-11-26 07:20:29,839 | INFO     | .. there are 40 such processes running
[2025-11-26 02:20:48] 2025-11-26 07:20:29,839 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:20:48] 2025-11-26 07:20:29,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:20:48] 2025-11-26 07:20:29,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:20:48] 2025-11-26 07:20:40,388 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:20:48] 2025-11-26 07:20:41,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148404221760)>', '<ExcThread(monitor, started 140147903411968)>']
[2025-11-26 02:20:48] 2025-11-26 07:20:41,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:20:48] 2025-11-26 07:20:41,927 | INFO     | [monitor] control thread has ended
[2025-11-26 02:20:48] 2025-11-26 07:20:46,807 | INFO     | all workflow threads have been joined
[2025-11-26 02:20:48] 2025-11-26 07:20:46,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:20:48] 2025-11-26 07:20:46,808 | INFO     | traces error code: 0
[2025-11-26 02:20:48] 2025-11-26 07:20:46,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:20:48] 2025-11-26 07:20:47,883 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:20:48] 2025-11-26 07:20:47,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:20:48] 2025-11-26 07:20:47,914 [wrapper] pilotpid: 194194
[2025-11-26 02:20:48] 2025-11-26 07:20:47,917 [wrapper] Pilot exit status: 0
[2025-11-26 02:20:48] 2025-11-26 07:20:47,980 [wrapper] pandaids: 6895375014
[2025-11-26 02:20:48] 2025-11-26 07:20:48,122 [wrapper] cleanup supervisor_pilot 1485548 194195
[2025-11-26 02:20:48] 2025-11-26 07:20:48,157 [wrapper] Test setup, not cleaning
[2025-11-26 02:20:48] 2025-11-26 07:20:48,198 [wrapper] apfmon messages muted
[2025-11-26 02:20:48] 2025-11-26 07:20:48,285 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:20:48] 2025-11-26 07:20:48,305 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:20:48]  *** Error codes and diagnostics ***
[2025-11-26 02:20:48]     "exeErrorCode": 0,
[2025-11-26 02:20:48]     "exeErrorDiag": "",
[2025-11-26 02:20:48]     "pilotErrorCode": 0,
[2025-11-26 02:20:48]     "pilotErrorDiag": "",
[2025-11-26 02:20:48]  *** Listing of results directory ***
[2025-11-26 02:20:48] total 1321960
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-26 02:20:48] -rwx------. 1 boincer umatlas     36292 Nov 23 18:36 runpilot2-wrapper.sh
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:36 queuedata.json
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas       100 Nov 25 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:20:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 10:56 run_atlas
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas       105 Nov 25 10:56 job.xml
[2025-11-26 02:20:48] -rw-r--r--. 2 boincer umatlas 409256563 Nov 25 10:56 EVNT.47483658._000948.pool.root.1
[2025-11-26 02:20:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:56 start_atlas.sh
[2025-11-26 02:20:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 10:56 shared
[2025-11-26 02:20:48] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 10:56 input.tar.gz
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas         0 Nov 25 10:56 boinc_lockfile
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 10:56 pandaJob.out
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas        57 Nov 25 10:56 setup.sh.local
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas    991909 Nov 25 10:57 agis_schedconf.cvmfs.json
[2025-11-26 02:20:48] drwx------. 5 boincer umatlas      4096 Nov 25 10:57 pilot3
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas       533 Nov 26 01:34 boinc_task_state.xml
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas 922029841 Nov 26 02:15 HITS.47556137._009347.pool.root.1
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas      1066 Nov 26 02:19 memory_monitor_summary.json
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas        95 Nov 26 02:19 pilot_heartbeat.json
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas   1516240 Nov 26 02:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas   2076042 Nov 26 02:19 log.47556137._009347.job.log.tgz.1
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas      8617 Nov 26 02:19 heartbeat.json
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 02:20 init_data.xml
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 02:20 boinc_mmap_file
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas        29 Nov 26 02:20 wrapper_checkpoint.txt
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas      5010 Nov 26 02:20 pilotlog.txt
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas   7165085 Nov 26 02:20 log.47556137._009347.job.log.1
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas       353 Nov 26 02:20 output.list
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas       620 Nov 26 02:20 runtime_log
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas   9256960 Nov 26 02:20 result.tar.gz
[2025-11-26 02:20:48] -rw-------. 1 boincer umatlas       665 Nov 26 02:20 SIQODmznYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyHLKDmS7y0Om.diag
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 02:20 runtime_log.err
[2025-11-26 02:20:48] -rw-r--r--. 1 boincer umatlas     21724 Nov 26 02:20 stderr.txt
[2025-11-26 02:20:48] HITS file was successfully produced:
[2025-11-26 02:20:49] -rw-------. 1 boincer umatlas 922029841 Nov 26 02:15 shared/HITS.pool.root.1
[2025-11-26 02:20:49]  *** Contents of shared directory: ***
[2025-11-26 02:20:49] total 1309732
[2025-11-26 02:20:49] -rw-r--r--. 2 boincer umatlas 409256563 Nov 25 10:56 ATLAS.root_0
[2025-11-26 02:20:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:56 start_atlas.sh
[2025-11-26 02:20:49] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 10:56 input.tar.gz
[2025-11-26 02:20:49] -rw-------. 1 boincer umatlas 922029841 Nov 26 02:15 HITS.pool.root.1
[2025-11-26 02:20:49] -rw-------. 1 boincer umatlas   9256960 Nov 26 02:20 result.tar.gz
02:20:50 (190389): run_atlas exited; CPU time 194498.827114
02:20:50 (190389): called boinc_finish(0)

</stderr_txt>
]]>

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