Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:21:58 (32340): wrapper (7.7.26015): starting
06:21:58 (32340): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 06:21:58] Arguments: --nthreads 12
[2025-11-25 06:21:58] Threads: 12
[2025-11-25 06:21:58] Checking for CVMFS
[2025-11-25 06:21:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:21:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:21:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:21:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:21:59] 2.11.2.0 3081 286128 97052 153281 3 71 17049349 20275201 1 130560 1 128956349 99.965 16808233 14322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:21:59] CVMFS is ok
[2025-11-25 06:21:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:21:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:21:59] Further information can be found at the LHC@home message board.
[2025-11-25 06:21:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:21:59] Checking for apptainer binary...
[2025-11-25 06:21:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:21:59] Running /usr/bin/apptainer --version
[2025-11-25 06:21:59] apptainer version 1.3.2-1.el7
[2025-11-25 06:21:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:22:00] c-205-29.aglt2.org
[2025-11-25 06:22:00] apptainer works
[2025-11-25 06:22:00] Set ATHENA_PROC_NUMBER=12
[2025-11-25 06:22:00] Set ATHENA_CORE_NUMBER=12
[2025-11-25 06:22:00] Starting ATLAS job with PandaID=6895376852
[2025-11-25 06:22:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:29:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:29:05] 2025-11-25 18:28:32,302 | INFO     | monitor loop #1916: job 0:6895376852 is in state 'finished'
[2025-11-25 13:29:05] 2025-11-25 18:28:32,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,651 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 13:29:05] 2025-11-25 18:28:33,654 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 13:29:05] 2025-11-25 18:28:33,656 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895376852/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,656 | INFO     | extracted standard info from prmon json
[2025-11-25 13:29:05] 2025-11-25 18:28:33,657 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:29:05] 2025-11-25 18:28:33,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:29:05] 2025-11-25 18:28:33,663 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:29:05] 2025-11-25 18:28:33,664 | INFO     | sum of square deviations: 22809594406.668
[2025-11-25 13:29:05] 2025-11-25 18:28:33,668 | INFO     | sum of deviations: 313721379629.3723
[2025-11-25 13:29:05] 2025-11-25 18:28:33,668 | INFO     | mean x: 1764082513.214797
[2025-11-25 13:29:05] 2025-11-25 18:28:33,668 | INFO     | mean y: 3442094.262529833
[2025-11-25 13:29:05] 2025-11-25 18:28:33,668 | INFO     | intersect: -24259610985.89266
[2025-11-25 13:29:05] 2025-11-25 18:28:33,669 | INFO     | chi2: 5.075958248264284
[2025-11-25 13:29:05] 2025-11-25 18:28:33,669 | INFO     | sum of square deviations: 22002750913.934753
[2025-11-25 13:29:05] 2025-11-25 18:28:33,673 | INFO     | sum of deviations: 458760448266.91327
[2025-11-25 13:29:05] 2025-11-25 18:28:33,673 | INFO     | mean x: 1764082360.7173913
[2025-11-25 13:29:05] 2025-11-25 18:28:33,673 | INFO     | mean y: 3469469.8454106282
[2025-11-25 13:29:05] 2025-11-25 18:28:33,673 | INFO     | intersect: -36777895630.73052
[2025-11-25 13:29:05] 2025-11-25 18:28:33,674 | INFO     | chi2: 2.56354866410005
[2025-11-25 13:29:05] 2025-11-25 18:28:33,674 | INFO     | current chi2=2.56354866410005 (change=49.496261814670135 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,674 | INFO     | sum of square deviations: 21215163596.195667
[2025-11-25 13:29:05] 2025-11-25 18:28:33,678 | INFO     | sum of deviations: 483763293319.8994
[2025-11-25 13:29:05] 2025-11-25 18:28:33,678 | INFO     | mean x: 1764082208.220049
[2025-11-25 13:29:05] 2025-11-25 18:28:33,678 | INFO     | mean y: 3474270.0122249387
[2025-11-25 13:29:05] 2025-11-25 18:28:33,678 | INFO     | intersect: -40222386580.22435
[2025-11-25 13:29:05] 2025-11-25 18:28:33,679 | INFO     | chi2: 2.3277957350994307
[2025-11-25 13:29:05] 2025-11-25 18:28:33,679 | INFO     | current chi2=2.3277957350994307 (change=9.1963508359371 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,679 | INFO     | right removable region: 408
[2025-11-25 13:29:05] 2025-11-25 18:28:33,679 | INFO     | sum of square deviations: 22002696013.93474
[2025-11-25 13:29:05] 2025-11-25 18:28:33,683 | INFO     | sum of deviations: 184522962610.67377
[2025-11-25 13:29:05] 2025-11-25 18:28:33,683 | INFO     | mean x: 1764082665.7173913
[2025-11-25 13:29:05] 2025-11-25 18:28:33,683 | INFO     | mean y: 3466424.3647342995
[2025-11-25 13:29:05] 2025-11-25 18:28:33,683 | INFO     | intersect: -14790800585.557762
[2025-11-25 13:29:05] 2025-11-25 18:28:33,684 | INFO     | chi2: 2.893188599947644
[2025-11-25 13:29:05] 2025-11-25 18:28:33,684 | INFO     | current chi2=2.893188599947644 (change=43.00211982758201 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,685 | INFO     | sum of square deviations: 21215078927.63329
[2025-11-25 13:29:05] 2025-11-25 18:28:33,688 | INFO     | sum of deviations: 151519477146.61356
[2025-11-25 13:29:05] 2025-11-25 18:28:33,688 | INFO     | mean x: 1764082818.217604
[2025-11-25 13:29:05] 2025-11-25 18:28:33,688 | INFO     | mean y: 3472806.442542787
[2025-11-25 13:29:05] 2025-11-25 18:28:33,688 | INFO     | intersect: -12595721717.952965
[2025-11-25 13:29:05] 2025-11-25 18:28:33,689 | INFO     | chi2: 2.824105868888538
[2025-11-25 13:29:05] 2025-11-25 18:28:33,689 | INFO     | current chi2=2.824105868888538 (change=2.3877714387633127 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,689 | INFO     | left removable region: 20
[2025-11-25 13:29:05] 2025-11-25 18:28:33,690 | INFO     | sum of square deviations: 18112155509.04131
[2025-11-25 13:29:05] 2025-11-25 18:28:33,693 | INFO     | sum of deviations: 280217593973.0823
[2025-11-25 13:29:05] 2025-11-25 18:28:33,693 | INFO     | mean x: 1764082787.726804
[2025-11-25 13:29:05] 2025-11-25 18:28:33,693 | INFO     | mean y: 3514442.9536082475
[2025-11-25 13:29:05] 2025-11-25 18:28:33,693 | INFO     | intersect: -27289042431.31639
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | chi2: 0.024871848941326307
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | current memory leak: 15.47 B/s (using 388 data points, chi2=0.02)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | could have reported an average CPU frequency of 2386 MHz (18 samples)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | ..............................
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | . Timing measurements:
[2025-11-25 13:29:05] 2025-11-25 18:28:33,694 | INFO     | . get job = 0 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . initial setup = 2 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . payload setup = 7 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . stage-in = 0 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . payload execution = 25539 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . stage-out = 3 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | . log creation = 0 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,695 | INFO     | ..............................
[2025-11-25 13:29:05] 2025-11-25 18:28:33,775 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:33,776 | INFO     | job summary report
[2025-11-25 13:29:05] 2025-11-25 18:28:33,776 | INFO     | --------------------------------------------------
[2025-11-25 13:29:05] 2025-11-25 18:28:33,776 | INFO     | PanDA job id: 6895376852
[2025-11-25 13:29:05] 2025-11-25 18:28:33,776 | INFO     | task id: 47556137
[2025-11-25 13:29:05] 2025-11-25 18:28:33,776 | INFO     | errors: (none)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | pilot state: finished 
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | transexitcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | exeerrorcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | exeerrordiag: 
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | exitcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:33,777 | INFO     | exitmsg: OK
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | cpuconsumptiontime: 293674 s
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | nevents: 1000
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | neventsw: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | pid: 10693
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | pgrp: 10693
[2025-11-25 13:29:05] 2025-11-25 18:28:33,778 | INFO     | corecount: 12
[2025-11-25 13:29:05] 2025-11-25 18:28:33,779 | INFO     | event service: False
[2025-11-25 13:29:05] 2025-11-25 18:28:33,779 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 25550: 2321785, 25554: 2330779, 25556: 2330835, 25562: 2331209}
[2025-11-25 13:29:05] 2025-11-25 18:28:33,779 | INFO     | --------------------------------------------------
[2025-11-25 13:29:05] 2025-11-25 18:28:33,779 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:33,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 13:29:05] 2025-11-25 18:28:33,805 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,805 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:33,809 | INFO     | job 6895376852 has completed (purged errors)
[2025-11-25 13:29:05] 2025-11-25 18:28:33,809 | INFO     | overall cleanup function is called
[2025-11-25 13:29:05] 2025-11-25 18:28:34,825 | INFO     | --- collectZombieJob: --- 10, [10693]
[2025-11-25 13:29:05] 2025-11-25 18:28:34,825 | INFO     | zombie collector waiting for pid 10693
[2025-11-25 13:29:05] 2025-11-25 18:28:34,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:29:05] 2025-11-25 18:28:34,825 | INFO     | collected zombie processes
[2025-11-25 13:29:05] 2025-11-25 18:28:34,826 | INFO     | will attempt to kill all subprocesses of pid=10693
[2025-11-25 13:29:05] 2025-11-25 18:28:34,919 | INFO     | process IDs to be killed: [10693] (in reverse order)
[2025-11-25 13:29:05] 2025-11-25 18:28:34,970 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:29:05] 2025-11-25 18:28:34,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:29:05] 2025-11-25 18:28:34,974 | INFO     | did not find any defunct processes belonging to 10693
[2025-11-25 13:29:05] 2025-11-25 18:28:34,977 | INFO     | did not find any defunct processes belonging to 10693
[2025-11-25 13:29:05] 2025-11-25 18:28:34,979 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:29:05] 2025-11-25 18:28:34,980 | INFO     | ready for new job
[2025-11-25 13:29:05] 2025-11-25 18:28:34,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:29:05] 2025-11-25 18:28:34,982 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:34,982 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:29:05] 2025-11-25 18:28:34,983 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:34,983 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:34,983 | INFO     | architecture information:
[2025-11-25 13:29:05] 2025-11-25 18:28:34,984 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:29:05] 2025-11-25 18:28:35,001 | INFO     | cat /etc/os-release:
[2025-11-25 13:29:05] NAME="CentOS Linux"
[2025-11-25 13:29:05] VERSION="7 (Core)"
[2025-11-25 13:29:05] ID="centos"
[2025-11-25 13:29:05] ID_LIKE="rhel fedora"
[2025-11-25 13:29:05] VERSION_ID="7"
[2025-11-25 13:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:29:05] ANSI_COLOR="0;31"
[2025-11-25 13:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:29:05] HOME_URL="https://www.centos.org/"
[2025-11-25 13:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:29:05] 
[2025-11-25 13:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:29:05] 
[2025-11-25 13:29:05] 2025-11-25 18:28:35,001 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:35,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 13:29:05] 2025-11-25 18:28:35,520 | INFO     | sufficient remaining disk space (28257026048 B)
[2025-11-25 13:29:05] 2025-11-25 18:28:35,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:29:05] 2025-11-25 18:28:35,521 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:29:05] 2025-11-25 18:28:35,521 | INFO     | update_server=False
[2025-11-25 13:29:05] 2025-11-25 18:28:35,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:29:05] 2025-11-25 18:28:35,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:35,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:35,811 | INFO     | aborting loop
[2025-11-25 13:29:05] 2025-11-25 18:28:36,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:36,237 | INFO     | all data control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:36,328 | INFO     | all job control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:36,459 | INFO     | all payload control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:36,526 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:36,527 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:36,546 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:36,555 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:36,817 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,154 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,242 | INFO     | [data] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,333 | INFO     | [job] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,411 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,464 | INFO     | [payload] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,554 | INFO     | [job] validate thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,652 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:37,939 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:38,107 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:38,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:42,164 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:45,932 | INFO     | job.realtimelogging is not enabled
[2025-11-25 13:29:05] 2025-11-25 18:28:46,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:56,817 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:29:05] 2025-11-25 18:28:57,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916841142080)>', '<ExcThread(monitor, started 139915589310208)>']
[2025-11-25 13:29:05] 2025-11-25 18:29:02,316 | INFO     | all workflow threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:29:02,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:29:05] 2025-11-25 18:29:02,317 | INFO     | traces error code: 0
[2025-11-25 13:29:05] 2025-11-25 18:29:02,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:29:05] 2025-11-25 18:29:05,370 | INFO     | PID=3809 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 13:29:05] 2025-11-25 18:29:05,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:29:05] 2025-11-25 18:29:05,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:29:05] 2025-11-25 18:29:05,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:29:05] 2025-11-25 18:29:05,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:29:05] 2025-11-25 18:29:05,371 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 13:29:05] 2025-11-25 18:29:05,371 | INFO     | [monitor] control thread has ended
[2025-11-25 13:29:05] 2025-11-25 18:29:05,453 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,461 [wrapper] pilotpid: 3809
[2025-11-25 13:29:05] 2025-11-25 18:29:05,464 [wrapper] Pilot exit status: 0
[2025-11-25 13:29:05] 2025-11-25 18:29:05,479 [wrapper] pandaids: 6895376852
[2025-11-25 13:29:05] 2025-11-25 18:29:05,519 [wrapper] cleanup supervisor_pilot 28969 3810
[2025-11-25 13:29:05] 2025-11-25 18:29:05,523 [wrapper] Test setup, not cleaning
[2025-11-25 13:29:05] 2025-11-25 18:29:05,527 [wrapper] apfmon messages muted
[2025-11-25 13:29:05] 2025-11-25 18:29:05,531 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,535 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:29:05]  *** Error codes and diagnostics ***
[2025-11-25 13:29:05]     "exeErrorCode": 0,
[2025-11-25 13:29:05]     "exeErrorDiag": "",
[2025-11-25 13:29:05]     "pilotErrorCode": 0,
[2025-11-25 13:29:05]     "pilotErrorDiag": "",
[2025-11-25 13:29:05]  *** Listing of results directory ***
[2025-11-25 13:29:05] total 1302400
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 19:08 pilot3.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 19:24 queuedata.json
[2025-11-25 13:29:05] -rwx------ 1 boincer umatlas     36292 Nov 23 19:25 runpilot2-wrapper.sh
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:29:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:21 run_atlas
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:21 job.xml
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas 411229397 Nov 25 06:21 EVNT.47483658._000962.pool.root.1
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:21 start_atlas.sh
[2025-11-25 13:29:05] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:21 shared
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 06:21 input.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:21 boinc_lockfile
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 06:22 pandaJob.out
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas        57 Nov 25 06:22 setup.sh.local
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas    991894 Nov 25 06:22 agis_schedconf.cvmfs.json
[2025-11-25 13:29:05] drwx------ 5 boincer umatlas      4096 Nov 25 06:22 pilot3
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       533 Nov 25 13:19 boinc_task_state.xml
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 13:19 init_data.xml
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 906996749 Nov 25 13:27 HITS.47556137._009489.pool.root.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas      1063 Nov 25 13:28 memory_monitor_summary.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   1516240 Nov 25 13:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas        95 Nov 25 13:28 pilot_heartbeat.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   2177765 Nov 25 13:28 log.47556137._009489.job.log.tgz.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas      8667 Nov 25 13:28 heartbeat.json
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas        29 Nov 25 13:28 wrapper_checkpoint.txt
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 13:28 boinc_mmap_file
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas       814 Nov 25 13:29 pilotlog.txt
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   3581232 Nov 25 13:29 log.47556137._009489.job.log.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas       353 Nov 25 13:29 output.list
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       620 Nov 25 13:29 runtime_log
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   5775360 Nov 25 13:29 result.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 13:29 runtime_log.err
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas       670 Nov 25 13:29 7hjMDmxZZh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXJLKDmHkxx8m.diag
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas     21246 Nov 25 13:29 stderr.txt
[2025-11-25 13:29:05] HITS file was successfully produced:
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 906996749 Nov 25 13:27 shared/HITS.pool.root.1
[2025-11-25 13:29:05]  *** Contents of shared directory: ***
[2025-11-25 13:29:05] total 1293576
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas 411229397 Nov 25 06:21 ATLAS.root_0
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:21 start_atlas.sh
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 06:21 input.tar.gz
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 906996749 Nov 25 13:27 HITS.pool.root.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   5775360 Nov 25 13:29 result.tar.gz
13:29:07 (32340): run_atlas exited; CPU time 287085.576586
13:29:07 (32340): called boinc_finish(0)

</stderr_txt>
]]>

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