Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 06:47:58 (19592): vboxwrapper version 26210
2025-11-25 06:47:58 (19592): BOINC client version: 8.2.7
2025-11-25 06:47:59 (19592): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-11-25 06:48:00 (19592): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 06:48:00 (19592): Create VM. (boinc_73a9c83ec5c027ba, slot#4)
2025-11-25 06:48:01 (19592): Setting Memory Size for VM. (4400MB)
2025-11-25 06:48:02 (19592): Setting CPU Count for VM. (4)
2025-11-25 06:48:02 (19592): Setting Chipset Options for VM.
2025-11-25 06:48:03 (19592): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 06:48:03 (19592): Setting Boot Options for VM.
2025-11-25 06:48:04 (19592): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 06:48:04 (19592): Enabling VM Network Access.
2025-11-25 06:48:05 (19592): Disabling USB Support for VM.
2025-11-25 06:48:05 (19592): Disabling COM Port Support for VM.
2025-11-25 06:48:05 (19592): Disabling LPT Port Support for VM.
2025-11-25 06:48:05 (19592): Disabling Audio Support for VM.
2025-11-25 06:48:06 (19592): Disabling Clipboard Support for VM.
2025-11-25 06:48:06 (19592): Disabling Drag and Drop Support for VM.
2025-11-25 06:48:06 (19592): Adding storage controller(s) to VM.
2025-11-25 06:48:06 (19592): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 06:48:09 (19592): Adding VirtualBox Guest Additions to VM.
2025-11-25 06:48:09 (19592): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 06:48:09 (19592): forwarding host port 64340 to guest port 80
2025-11-25 06:48:10 (19592): Enabling remote desktop for VM.
2025-11-25 06:48:10 (19592): Enabling shared directory for VM.
2025-11-25 06:48:11 (19592): Starting VM using VBoxManage interface. (boinc_73a9c83ec5c027ba, slot#4)
2025-11-25 06:48:15 (19592): Successfully started VM. (PID = '4876')
2025-11-25 06:48:15 (19592): Reporting VM Process ID to BOINC.
2025-11-25 06:48:15 (19592): Guest Log: BIOS: VirtualBox 7.2.0
2025-11-25 06:48:15 (19592): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 06:48:15 (19592): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 06:48:15 (19592): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 06:48:15 (19592): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 06:48:15 (19592): Detected: Web Application Enabled (http://localhost:64340)
2025-11-25 06:48:15 (19592): Detected: Remote Desktop Enabled (localhost:64349)
2025-11-25 06:48:15 (19592): Preference change detected
2025-11-25 06:48:15 (19592): Setting CPU throttle for VM. (100%)
2025-11-25 06:48:16 (19592): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 06:48:17 (19592): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 06:48:17 (19592): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 06:48:20 (19592): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 06:48:20 (19592): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 06:48:20 (19592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 06:48:30 (19592): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 06:48:30 (19592): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 06:48:43 (19592): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000095 main     Log opened 2025-11-25T06:48:40.638462000Z
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000165 main     OS Product: Linux
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000187 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000203 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000218 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000219 main     Process ID: 1310
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000219 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 06:48:43 (19592): Guest Log: 00:00:00.000845 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 06:48:43 (19592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 06:48:43 (19592): Guest Log: [INFO] Mounting shared directory
2025-11-25 06:48:43 (19592): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 06:48:53 (19592): Guest Log: 00:00:10.002782 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 435 772 000ns (GuestNow=1 764 071 333 075 942 000 ns GuestLast=1 764 053 320 640 170 000 ns fSetTimeLastLoop=true )
2025-11-25 06:49:06 (19592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 06:49:06 (19592): Guest Log: [INFO] Detected branch: prod
2025-11-25 06:49:06 (19592): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 06:49:06 (19592): Guest Log: Copying input files
2025-11-25 06:49:11 (19592): Guest Log: Copied input files into RunAtlas.
2025-11-25 06:49:11 (19592): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 06:49:11 (19592): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 06:49:11 (19592): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 06:49:11 (19592): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 06:49:22 (19592): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 06:49:23 (19592): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 06:49:23 (19592): Guest Log: 2.6.3.0 1612 0 30180 153281 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 06:49:25 (19592): Guest Log: copied the webapp to /var/www
2025-11-25 06:49:25 (19592): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-25 06:49:25 (19592): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-25 06:49:26 (19592): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 06:49:26 (19592): Guest Log:  *** Starting ATLAS job. (PandaID=6895651664 taskID=47556149) ***
2025-11-25 08:28:18 (19592): Status Report: Elapsed Time: '6000.000000'
2025-11-25 08:28:18 (19592): Status Report: CPU Time: '21073.781250'
2025-11-25 10:08:21 (19592): Status Report: Elapsed Time: '12000.000000'
2025-11-25 10:08:21 (19592): Status Report: CPU Time: '44891.968750'
2025-11-25 11:48:23 (19592): Status Report: Elapsed Time: '18000.000000'
2025-11-25 11:48:23 (19592): Status Report: CPU Time: '68675.062500'
2025-11-25 13:28:26 (19592): Status Report: Elapsed Time: '24000.000000'
2025-11-25 13:28:26 (19592): Status Report: CPU Time: '92468.078125'
2025-11-25 15:08:29 (19592): Status Report: Elapsed Time: '30000.000000'
2025-11-25 15:08:29 (19592): Status Report: CPU Time: '116274.281250'
2025-11-25 16:48:31 (19592): Status Report: Elapsed Time: '36000.000000'
2025-11-25 16:48:31 (19592): Status Report: CPU Time: '140007.390625'
2025-11-25 17:32:56 (19592): VM state change detected. (old = 'running', new = 'paused')
2025-11-25 17:39:27 (19592): VM state change detected. (old = 'paused', new = 'running')
2025-11-25 18:35:06 (19592): Status Report: Elapsed Time: '42000.000000'
2025-11-25 18:35:06 (19592): Status Report: CPU Time: '163751.593750'
2025-11-25 20:15:09 (19592): Status Report: Elapsed Time: '48000.000000'
2025-11-25 20:15:09 (19592): Status Report: CPU Time: '187449.421875'
2025-11-25 21:55:12 (19592): Status Report: Elapsed Time: '54000.000000'
2025-11-25 21:55:12 (19592): Status Report: CPU Time: '211147.921875'
2025-11-25 23:34:50 (19592): Guest Log:  *** Job finished ***
2025-11-25 23:34:50 (19592): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:27:58,239 | INFO     | all workflow threads have been joined
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:27:58,239 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:27:58,239 | INFO     | traces error code: 0
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:27:58,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | INFO     | PID=6011 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | INFO     | found 0 job(s) in 20 queues
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:13,933 | INFO     | [monitor] control thread has ended
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,231 [wrapper] ==== pilot stdout END ====
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,237 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,242 [wrapper] pilotpid: 6011
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,247 [wrapper] Pilot exit status: 0
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,286 [wrapper] pandaids: 6895651664
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,313 [wrapper] cleanup supervisor_pilot 24871 6012
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,317 [wrapper] Test setup, not cleaning
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,321 [wrapper] apfmon messages muted
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,326 [wrapper] ==== wrapper stdout END ====
2025-11-25 23:34:50 (19592): Guest Log: 2025-11-26 04:28:14,331 [wrapper] ==== wrapper stderr END ====
2025-11-25 23:34:50 (19592): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 23:34:50 (19592): Guest Log:     "exeErrorCode": 0,
2025-11-25 23:34:50 (19592): Guest Log:     "exeErrorDiag": "",
2025-11-25 23:34:50 (19592): Guest Log:     "pilotErrorCode": 0,
2025-11-25 23:34:50 (19592): Guest Log:     "pilotErrorDiag": "",
2025-11-25 23:34:50 (19592): Guest Log:  *** Listing of results directory ***
2025-11-25 23:34:50 (19592): Guest Log: total 920344
2025-11-25 23:34:50 (19592): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 24 12:18 pilot3.tar.gz
2025-11-25 23:34:50 (19592): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 24 12:31 queuedata.json
2025-11-25 23:34:50 (19592): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 24 12:33 runpilot2-wrapper.sh
2025-11-25 23:34:50 (19592): Guest Log: -rwxr-xr-x. 1 atlas atlas      8486 Nov 25 11:49 init_data.xml
2025-11-25 23:34:50 (19592): Guest Log: -rwxr-xr-x. 1 atlas atlas    590104 Nov 25 11:49 input.tar.gz
2025-11-25 23:34:50 (19592): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 25 11:49 start_atlas.sh
2025-11-25 23:34:50 (19592): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 11:49 EVNT.47483658._001336.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 23:34:50 (19592): Guest Log: -rw-r--r--. 1 atlas atlas      2783 Nov 25 11:49 pandaJob.out
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas    991894 Nov 25 11:50 agis_schedconf.cvmfs.json
2025-11-25 23:34:50 (19592): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 11:50 pilot3
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas 919313150 Nov 26 04:27 HITS.47556149._003221.pool.root.1
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas      1036 Nov 26 04:27 memory_monitor_summary.json
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 04:27 pilot_heartbeat.json
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 04:27 agis_ddmendpoints.agis.ALL.json
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas   1687352 Nov 26 04:27 log.47556149._003221.job.log.tgz.1
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas      8638 Nov 26 04:27 heartbeat.json
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas       744 Nov 26 04:28 pilotlog.txt
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas   7947171 Nov 26 04:28 log.47556149._003221.job.log.1
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 04:28 output.list
2025-11-25 23:34:50 (19592): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 04:28 runtime_log
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas   9656320 Nov 26 04:28 result.tar.gz
2025-11-25 23:34:50 (19592): Guest Log: -rw-r--r--. 1 atlas atlas      8744 Nov 26 04:28 runtime_log.err
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas       660 Nov 26 04:28 jgZKDmnvkh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkfLKDmasgaBo.diag
2025-11-25 23:34:50 (19592): Guest Log: Looking for outputfile HITS.47556149._003221.pool.root.1
2025-11-25 23:34:50 (19592): Guest Log: HITS file was successfully produced
2025-11-25 23:34:50 (19592): Guest Log: -rw-------. 1 atlas atlas 919313150 Nov 26 04:27 /home/atlas/RunAtlas/HITS.47556149._003221.pool.root.1
2025-11-25 23:35:15 (19592): Status Report: Elapsed Time: '60000.000000'
2025-11-25 23:35:15 (19592): Status Report: CPU Time: '233049.156250'
2025-11-25 23:35:30 (19592): Guest Log: Successfully finished the ATLAS job!
2025-11-25 23:35:30 (19592): Guest Log: Copying the results back to the shared directory!
2025-11-25 23:35:31 (19592): Guest Log:  *** Contents of shared directory: ***
2025-11-25 23:35:31 (19592): Guest Log: total 1307676
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root 409463401 Nov 25 11:47 ATLAS.root_0
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root 919313150 Nov 26  2025 HITS.pool.root.1
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root      8486 Nov 25 11:47 init_data.xml
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root    590104 Nov 25 11:46 input.tar.gz
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root   9656320 Nov 26  2025 result.tar.gz
2025-11-25 23:35:31 (19592): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 25 11:46 start_atlas.sh
2025-11-25 23:35:31 (19592): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 23:35:31 (19592): VM Completion File Detected.
2025-11-25 23:35:31 (19592): Powering off VM.
2025-11-25 23:35:33 (19592): Successfully stopped VM.
2025-11-25 23:35:33 (19592): Deregistering VM. (boinc_73a9c83ec5c027ba, slot#4)
2025-11-25 23:35:33 (19592): Removing network bandwidth throttle group from VM.
2025-11-25 23:35:34 (19592): Removing VM from VirtualBox.
2025-11-25 23:35:49 (19592): called boinc_finish(0)

</stderr_txt>
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