Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:18:14 (1197779): wrapper (7.7.26015): starting
08:18:14 (1197779): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:18:14] Arguments: --nthreads 8
[2025-11-25 08:18:14] Threads: 8
[2025-11-25 08:18:14] Checking for CVMFS
[2025-11-25 08:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:18:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:18:14] 2.13.2.0 3460 1155 64492 153287 1 89 4014655 4096000 2872 130560 0 3287959 99.659 1005223 1165 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 08:18:14] CVMFS is ok
[2025-11-25 08:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:18:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 08:18:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 08:18:14] Further information can be found at the LHC@home message board.
[2025-11-25 08:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:18:14] Checking for apptainer binary...
[2025-11-25 08:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:18:14] Running /usr/bin/apptainer --version
[2025-11-25 08:18:14] apptainer version 1.4.3
[2025-11-25 08:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:18:14] painter
[2025-11-25 08:18:14] apptainer works
[2025-11-25 08:18:14] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:18:14] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:18:14] Starting ATLAS job with PandaID=6895354753
[2025-11-25 08:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:39:57]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:39:57] 2025-11-25 18:39:24,033 | INFO     | executing command: lscpu
[2025-11-25 11:39:57] 2025-11-25 18:39:24,046 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 11:39:57] 2025-11-25 18:39:24,222 | INFO     | time since job start (12063s) is within the limit (172800.0s)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,261 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 11:39:57] 2025-11-25 18:39:25,263 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3897.314468750001
[2025-11-25 11:39:57] 2025-11-25 18:39:25,264 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6895354753/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,265 | INFO     | extracted standard info from prmon json
[2025-11-25 11:39:57] 2025-11-25 18:39:25,265 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:39:57] 2025-11-25 18:39:25,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | sum of square deviations: 2406926989.5
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | sum of deviations: 55301945683.49999
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | mean x: 1764089926.5
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | mean y: 2845422.0757575757
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | intersect: -40529171428.330864
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | chi2: 3.4510178604344013
[2025-11-25 11:39:57] 2025-11-25 18:39:25,266 | INFO     | sum of square deviations: 2229146912.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | sum of deviations: 90725470433.99998
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | mean x: 1764089774.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | mean y: 2875515.652849741
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | intersect: -71794938155.74985
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | chi2: 2.0669273863338757
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | current chi2=2.0669273863338757 (change=40.106731697015945 %)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | sum of square deviations: 2060343747.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | sum of deviations: 86637663343.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | mean x: 1764089621.5
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | mean y: 2871821.4468085105
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | intersect: -74177275523.83853
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | chi2: 2.0673715652113365
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | current chi2=2.0673715652113365 (change=-0.021489815288024017 %)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | right removable region: 187
[2025-11-25 11:39:57] 2025-11-25 18:39:25,267 | INFO     | sum of square deviations: 2229146912.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | sum of deviations: 8569040087.00005
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | mean x: 1764090079.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | mean y: 2885181.0518134716
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | intersect: -6778434848.890693
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | chi2: 1.4498642504703647
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | current chi2=1.4498642504703647 (change=57.98734433997217 %)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | sum of square deviations: 2060343747.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | sum of deviations: 1462725252.499998
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | mean x: 1764090231.5
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | mean y: 2891589.345744681
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | intersect: -1249510750.3419044
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | chi2: 1.4275297600690167
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | current chi2=1.4275297600690167 (change=1.540453900708449 %)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | left removable region: 20
[2025-11-25 11:39:57] 2025-11-25 18:39:25,268 | INFO     | sum of square deviations: 1444149868.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | sum of deviations: 24296279138.000004
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | mean x: 1764090201.0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | mean y: 2931689.502994012
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | intersect: -29676001846.29714
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | chi2: 0.006754265301542735
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | current memory leak: 16.82 B/s (using 167 data points, chi2=0.01)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | could have reported an average CPU frequency of 4334 MHz (10 samples)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | ..............................
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . Timing measurements:
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . get job = 0 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . initial setup = 4 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . payload setup = 2 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . stage-in = 0 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . payload execution = 12042 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . stage-out = 2 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | . log creation = 0 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,269 | INFO     | ..............................
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | 
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | job summary report
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | --------------------------------------------------
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | PanDA job id: 6895354753
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | task id: 47556137
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | errors: (none)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | pilot state: finished 
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | transexitcode: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | exeerrorcode: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | exeerrordiag: 
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | exitcode: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | exitmsg: OK
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | cpuconsumptiontime: 93599 s
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | nevents: 1000
[2025-11-25 11:39:57] 2025-11-25 18:39:25,292 | INFO     | neventsw: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | pid: 1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | pgrp: 1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | corecount: 8
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | event service: False
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | sizes: {0: 2284322, 1: 2284584, 11: 2284612, 12048: 2315379, 12050: 2324443, 12052: 2324633}
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | --------------------------------------------------
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | 
[2025-11-25 11:39:57] 2025-11-25 18:39:25,293 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | job 6895354753 has completed (purged errors)
[2025-11-25 11:39:57] 2025-11-25 18:39:25,302 | INFO     | overall cleanup function is called
[2025-11-25 11:39:57] 2025-11-25 18:39:26,311 | INFO     | --- collectZombieJob: --- 10, [1208286]
[2025-11-25 11:39:57] 2025-11-25 18:39:26,311 | INFO     | zombie collector waiting for pid 1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:26,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:39:57] 2025-11-25 18:39:26,311 | INFO     | collected zombie processes
[2025-11-25 11:39:57] 2025-11-25 18:39:26,311 | INFO     | will attempt to kill all subprocesses of pid=1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:26,355 | INFO     | process IDs to be killed: [1208286] (in reverse order)
[2025-11-25 11:39:57] 2025-11-25 18:39:26,377 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:39:57] 2025-11-25 18:39:26,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:39:57] 2025-11-25 18:39:26,379 | INFO     | did not find any defunct processes belonging to 1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:26,380 | INFO     | did not find any defunct processes belonging to 1208286
[2025-11-25 11:39:57] 2025-11-25 18:39:26,380 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:39:57] 2025-11-25 18:39:26,380 | INFO     | ready for new job
[2025-11-25 11:39:57] 2025-11-25 18:39:26,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:39:57] 2025-11-25 18:39:26,381 | INFO     | ***************************************
[2025-11-25 11:39:57] 2025-11-25 18:39:26,381 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:39:57] 2025-11-25 18:39:26,381 | INFO     | ***************************************
[2025-11-25 11:39:57] 2025-11-25 18:39:26,381 | INFO     | 
[2025-11-25 11:39:57] 2025-11-25 18:39:26,382 | INFO     | architecture information:
[2025-11-25 11:39:57] 2025-11-25 18:39:26,382 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:39:57] 2025-11-25 18:39:26,388 | INFO     | cat /etc/os-release:
[2025-11-25 11:39:57] NAME="CentOS Linux"
[2025-11-25 11:39:57] VERSION="7 (Core)"
[2025-11-25 11:39:57] ID="centos"
[2025-11-25 11:39:57] ID_LIKE="rhel fedora"
[2025-11-25 11:39:57] VERSION_ID="7"
[2025-11-25 11:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:39:57] ANSI_COLOR="0;31"
[2025-11-25 11:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:39:57] HOME_URL="https://www.centos.org/"
[2025-11-25 11:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:39:57] 
[2025-11-25 11:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:39:57] 
[2025-11-25 11:39:57] 2025-11-25 18:39:26,388 | INFO     | ***************************************
[2025-11-25 11:39:57] 2025-11-25 18:39:26,891 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | INFO     | sufficient remaining disk space (309069873152 B)
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | INFO     | update_server=False
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:39:57] 2025-11-25 18:39:26,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:39:57] 2025-11-25 18:39:27,231 | INFO     | all job control threads have been joined
[2025-11-25 11:39:57] 2025-11-25 18:39:27,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:39:57] 2025-11-25 18:39:27,444 | INFO     | aborting loop
[2025-11-25 11:39:57] 2025-11-25 18:39:27,873 | INFO     | all data control threads have been joined
[2025-11-25 11:39:57] 2025-11-25 18:39:27,902 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:27,902 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,159 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,236 | INFO     | [job] control thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,271 | INFO     | all payload control threads have been joined
[2025-11-25 11:39:57] 2025-11-25 18:39:28,449 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,595 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,878 | INFO     | [data] control thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:28,902 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,001 | INFO     | [job] validate thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,004 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,090 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,126 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,276 | INFO     | [payload] control thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:29,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:39:57] 2025-11-25 18:39:33,886 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:39:57] 2025-11-25 18:39:40,036 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:39:57] 2025-11-25 18:39:41,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117478266688)>', '<ExcThread(monitor, started 140116244813568)>']
[2025-11-25 11:39:57] 2025-11-25 18:39:46,227 | INFO     | all workflow threads have been joined
[2025-11-25 11:39:57] 2025-11-25 18:39:46,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:39:57] 2025-11-25 18:39:46,227 | INFO     | traces error code: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:46,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | INFO     | PID=1201627 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | INFO     | .. there are 3 such processes running
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:39:57] 2025-11-25 18:39:57,341 | INFO     | [monitor] control thread has ended
[2025-11-25 11:39:57] 2025-11-25 18:39:57,379 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:39:57] 2025-11-25 18:39:57,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:39:57] 2025-11-25 18:39:57,381 [wrapper] pilotpid: 1201627
[2025-11-25 11:39:57] 2025-11-25 18:39:57,382 [wrapper] Pilot exit status: 0
[2025-11-25 11:39:57] 2025-11-25 18:39:57,385 [wrapper] pandaids: 6895354753
[2025-11-25 11:39:57] 2025-11-25 18:39:57,401 [wrapper] cleanup supervisor_pilot 1309059 1201628
[2025-11-25 11:39:57] 2025-11-25 18:39:57,403 [wrapper] Test setup, not cleaning
[2025-11-25 11:39:57] 2025-11-25 18:39:57,404 [wrapper] apfmon messages muted
[2025-11-25 11:39:57] 2025-11-25 18:39:57,405 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:39:57] 2025-11-25 18:39:57,406 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:39:57]  *** Error codes and diagnostics ***
[2025-11-25 11:39:57]     "exeErrorCode": 0,
[2025-11-25 11:39:57]     "exeErrorDiag": "",
[2025-11-25 11:39:57]     "pilotErrorCode": 0,
[2025-11-25 11:39:57]     "pilotErrorDiag": "",
[2025-11-25 11:39:57]  *** Listing of results directory ***
[2025-11-25 11:39:57] total 1289724
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc    576529 Nov 22 22:21 pilot3.tar.gz
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:35 queuedata.json
[2025-11-25 11:39:57] -rwx------ 1 boinc boinc     36292 Nov 22 22:35 runpilot2-wrapper.sh
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc       100 Nov 25 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:39:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 08:18 run_atlas
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc       105 Nov 25 08:18 job.xml
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:18 start_atlas.sh
[2025-11-25 11:39:57] drwxrwx--x 2 boinc boinc      4096 Nov 25 08:18 shared
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc    590101 Nov 25 08:18 input.tar.gz
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc      9935 Nov 25 08:18 init_data.xml
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc 409437129 Nov 25 08:18 EVNT.47483658._000632.pool.root.1
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:18 boinc_lockfile
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc      2786 Nov 25 08:18 pandaJob.out
[2025-11-25 11:39:57] -rw------- 1 boinc boinc    991909 Nov 25 08:18 agis_schedconf.cvmfs.json
[2025-11-25 11:39:57] drwx------ 5 boinc boinc      4096 Nov 25 08:18 pilot3
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc       531 Nov 25 11:35 boinc_task_state.xml
[2025-11-25 11:39:57] -rw------- 1 boinc boinc 900726702 Nov 25 11:39 HITS.47556137._006274.pool.root.1
[2025-11-25 11:39:57] -rw------- 1 boinc boinc      1037 Nov 25 11:39 memory_monitor_summary.json
[2025-11-25 11:39:57] -rw------- 1 boinc boinc   1516240 Nov 25 11:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:39:57] -rw------- 1 boinc boinc   1513103 Nov 25 11:39 log.47556137._006274.job.log.tgz.1
[2025-11-25 11:39:57] -rw------- 1 boinc boinc      8550 Nov 25 11:39 heartbeat.json
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:39 boinc_mmap_file
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc        28 Nov 25 11:39 wrapper_checkpoint.txt
[2025-11-25 11:39:57] -rw------- 1 boinc boinc       822 Nov 25 11:39 pilotlog.txt
[2025-11-25 11:39:57] -rw------- 1 boinc boinc        95 Nov 25 11:39 pilot_heartbeat.json
[2025-11-25 11:39:57] -rw------- 1 boinc boinc   1785228 Nov 25 11:39 log.47556137._006274.job.log.1
[2025-11-25 11:39:57] -rw------- 1 boinc boinc       353 Nov 25 11:39 output.list
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:39 runtime_log
[2025-11-25 11:39:57] -rw------- 1 boinc boinc   3317760 Nov 25 11:39 result.tar.gz
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc      8923 Nov 25 11:39 runtime_log.err
[2025-11-25 11:39:57] -rw------- 1 boinc boinc       660 Nov 25 11:39 HpWNDmTwHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnfKKDmxEEmRo.diag
[2025-11-25 11:39:57] -rw-r--r-- 1 boinc boinc     21369 Nov 25 11:39 stderr.txt
[2025-11-25 11:39:57] HITS file was successfully produced:
[2025-11-25 11:39:57] -rw------- 1 boinc boinc 900726702 Nov 25 11:39 shared/HITS.pool.root.1
[2025-11-25 11:39:57]  *** Contents of shared directory: ***
[2025-11-25 11:39:57] total 1283304
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:18 start_atlas.sh
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc    590101 Nov 25 08:18 input.tar.gz
[2025-11-25 11:39:57] -rw-r--r-- 2 boinc boinc 409437129 Nov 25 08:18 ATLAS.root_0
[2025-11-25 11:39:57] -rw------- 1 boinc boinc 900726702 Nov 25 11:39 HITS.pool.root.1
[2025-11-25 11:39:57] -rw------- 1 boinc boinc   3317760 Nov 25 11:39 result.tar.gz
11:39:58 (1197779): run_atlas exited; CPU time 93512.486279
11:39:58 (1197779): called boinc_finish(0)

</stderr_txt>
]]>

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