Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:36 (2429651): wrapper (7.7.26015): starting
14:28:36 (2429651): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 14:28:36] Arguments: --nthreads 9
[2025-11-25 14:28:36] Threads: 9
[2025-11-25 14:28:36] Checking for CVMFS
[2025-11-25 14:28:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:28:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:28:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:28:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:28:37] 2.13.3.0 42195 28890 346312 153295 0 283 31506869 32935937 23876 16776704 0 168757336 99.786 98112283 33415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 14:28:37] CVMFS is ok
[2025-11-25 14:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:28:37] Further information can be found at the LHC@home message board.
[2025-11-25 14:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:28:37] Checking for apptainer binary...
[2025-11-25 14:28:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:28:37] Running /usr/bin/apptainer --version
[2025-11-25 14:28:37] apptainer version 1.4.4-1.el9
[2025-11-25 14:28:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:28:57] c-6-3.aglt2.org
[2025-11-25 14:28:57] apptainer works
[2025-11-25 14:28:58] Set ATHENA_PROC_NUMBER=9
[2025-11-25 14:28:58] Set ATHENA_CORE_NUMBER=9
[2025-11-25 14:28:58] Starting ATLAS job with PandaID=6895374711
[2025-11-25 14:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:56:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:56:33] 2025-11-26 16:55:36,683 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:56:33] 2025-11-26 16:55:36,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:56:33] 2025-11-26 16:55:36,707 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:56:33] 2025-11-26 16:55:36,710 | INFO     | sum of square deviations: 627695786210.7355
[2025-11-26 11:56:33] 2025-11-26 16:55:36,752 | INFO     | sum of deviations: 3630225204800.208
[2025-11-26 11:56:33] 2025-11-26 16:55:36,752 | INFO     | mean x: 1764137537.9683795
[2025-11-26 11:56:33] 2025-11-26 16:55:36,752 | INFO     | mean y: 3145132.50513834
[2025-11-26 11:56:33] 2025-11-26 16:55:36,753 | INFO     | intersect: -10199594308.726215
[2025-11-26 11:56:33] 2025-11-26 16:55:36,754 | INFO     | chi2: 7.997292513988705
[2025-11-26 11:56:33] 2025-11-26 16:55:36,756 | INFO     | sum of square deviations: 620282495246.0294
[2025-11-26 11:56:33] 2025-11-26 16:55:36,798 | INFO     | sum of deviations: 4103696214557.4253
[2025-11-26 11:56:33] 2025-11-26 16:55:36,798 | INFO     | mean x: 1764137385.4722223
[2025-11-26 11:56:33] 2025-11-26 16:55:36,798 | INFO     | mean y: 3154871.511904762
[2025-11-26 11:56:33] 2025-11-26 16:55:36,798 | INFO     | intersect: -11668114213.471891
[2025-11-26 11:56:33] 2025-11-26 16:55:36,800 | INFO     | chi2: 4.709054384974155
[2025-11-26 11:56:33] 2025-11-26 16:55:36,800 | INFO     | current chi2=4.709054384974155 (change=41.11689203893479 %)
[2025-11-26 11:56:33] 2025-11-26 16:55:36,802 | INFO     | sum of square deviations: 612927810031.2827
[2025-11-26 11:56:33] 2025-11-26 16:55:36,855 | INFO     | sum of deviations: 4408349103371.978
[2025-11-26 11:56:33] 2025-11-26 16:55:36,855 | INFO     | mean x: 1764137232.9760957
[2025-11-26 11:56:33] 2025-11-26 16:55:36,855 | INFO     | mean y: 3161183.6326693227
[2025-11-26 11:56:33] 2025-11-26 16:55:36,855 | INFO     | intersect: -12685009693.812706
[2025-11-26 11:56:33] 2025-11-26 16:55:36,857 | INFO     | chi2: 3.0988466866476534
[2025-11-26 11:56:33] 2025-11-26 16:55:36,857 | INFO     | current chi2=3.0988466866476534 (change=34.19386498198914 %)
[2025-11-26 11:56:33] 2025-11-26 16:55:36,859 | INFO     | sum of square deviations: 605631268707.8602
[2025-11-26 11:56:33] 2025-11-26 16:55:36,897 | INFO     | sum of deviations: 4482744565500.59
[2025-11-26 11:56:33] 2025-11-26 16:55:36,898 | INFO     | mean x: 1764137080.4776
[2025-11-26 11:56:33] 2025-11-26 16:55:36,898 | INFO     | mean y: 3162735.128
[2025-11-26 11:56:33] 2025-11-26 16:55:36,898 | INFO     | intersect: -13054577706.810318
[2025-11-26 11:56:33] 2025-11-26 16:55:36,900 | INFO     | chi2: 2.8483583550807623
[2025-11-26 11:56:33] 2025-11-26 16:55:36,900 | INFO     | current chi2=2.8483583550807623 (change=8.083276034474315 %)
[2025-11-26 11:56:33] 2025-11-26 16:55:36,900 | INFO     | right removable region: 1249
[2025-11-26 11:56:33] 2025-11-26 16:55:36,902 | INFO     | sum of square deviations: 620281747996.029
[2025-11-26 11:56:33] 2025-11-26 16:55:36,948 | INFO     | sum of deviations: 3237910158216.7246
[2025-11-26 11:56:33] 2025-11-26 16:55:36,948 | INFO     | mean x: 1764137690.4722223
[2025-11-26 11:56:33] 2025-11-26 16:55:36,948 | INFO     | mean y: 3153194.677777778
[2025-11-26 11:56:33] 2025-11-26 16:55:36,948 | INFO     | intersect: -9205757702.551409
[2025-11-26 11:56:33] 2025-11-26 16:55:36,950 | INFO     | chi2: 5.660739992136145
[2025-11-26 11:56:33] 2025-11-26 16:55:36,950 | INFO     | current chi2=5.660739992136145 (change=29.21679453096793 %)
[2025-11-26 11:56:33] 2025-11-26 16:55:36,952 | INFO     | sum of square deviations: 612926392148.2333
[2025-11-26 11:56:33] 2025-11-26 16:55:37,024 | INFO     | sum of deviations: 3135918591804.396
[2025-11-26 11:56:33] 2025-11-26 16:55:37,025 | INFO     | mean x: 1764137842.975299
[2025-11-26 11:56:33] 2025-11-26 16:55:37,025 | INFO     | mean y: 3155308.948207171
[2025-11-26 11:56:33] 2025-11-26 16:55:37,025 | INFO     | intersect: -9022712611.182095
[2025-11-26 11:56:33] 2025-11-26 16:55:37,026 | INFO     | chi2: 5.6062079562667355
[2025-11-26 11:56:33] 2025-11-26 16:55:37,027 | INFO     | current chi2=5.6062079562667355 (change=0.9633375838700445 %)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,027 | INFO     | left removable region: 20
[2025-11-26 11:56:33] 2025-11-26 16:55:37,028 | INFO     | sum of square deviations: 575616489627.7906
[2025-11-26 11:56:33] 2025-11-26 16:55:37,070 | INFO     | sum of deviations: 3845533177728.621
[2025-11-26 11:56:33] 2025-11-26 16:55:37,070 | INFO     | mean x: 1764137659.9869814
[2025-11-26 11:56:33] 2025-11-26 16:55:37,070 | INFO     | mean y: 3175961.476810415
[2025-11-26 11:56:33] 2025-11-26 16:55:37,071 | INFO     | intersect: -11782535573.554478
[2025-11-26 11:56:33] 2025-11-26 16:55:37,072 | INFO     | chi2: 0.4230417478887898
[2025-11-26 11:56:33] 2025-11-26 16:55:37,072 | INFO     | current memory leak: 6.68 B/s (using 1229 data points, chi2=0.42)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,073 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | ..............................
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . Timing measurements:
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . get job = 0 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . initial setup = 2 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . payload setup = 8 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . stage-in = 0 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . payload execution = 77135 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . stage-out = 5 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,074 | INFO     | . log creation = 1 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,075 | INFO     | ..............................
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | 
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | job summary report
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | --------------------------------------------------
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | PanDA job id: 6895374711
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | task id: 47556137
[2025-11-26 11:56:33] 2025-11-26 16:55:37,226 | INFO     | errors: (none)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | pilot state: finished 
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | transexitcode: 0
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | exeerrorcode: 0
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | exeerrordiag: 
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | exitcode: 0
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | exitmsg: OK
[2025-11-26 11:56:33] 2025-11-26 16:55:37,227 | INFO     | cpuconsumptiontime: 304764 s
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | nevents: 1000
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | neventsw: 0
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | pid: 2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | pgrp: 2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | corecount: 9
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | event service: False
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | sizes: {0: 2284037, 1: 2284292, 9: 2284554, 12: 2284582, 77147: 2347389, 77153: 2356383, 77156: 2356567, 77167: 2356813}
[2025-11-26 11:56:33] 2025-11-26 16:55:37,228 | INFO     | --------------------------------------------------
[2025-11-26 11:56:33] 2025-11-26 16:55:37,229 | INFO     | 
[2025-11-26 11:56:33] 2025-11-26 16:55:37,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 11:56:33] 2025-11-26 16:55:37,349 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:56:33] 2025-11-26 16:55:37,352 | INFO     | job 6895374711 has completed (purged errors)
[2025-11-26 11:56:33] 2025-11-26 16:55:37,352 | INFO     | overall cleanup function is called
[2025-11-26 11:56:33] 2025-11-26 16:55:38,389 | INFO     | --- collectZombieJob: --- 10, [2441622]
[2025-11-26 11:56:33] 2025-11-26 16:55:38,389 | INFO     | zombie collector waiting for pid 2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:38,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:56:33] 2025-11-26 16:55:38,389 | INFO     | collected zombie processes
[2025-11-26 11:56:33] 2025-11-26 16:55:38,389 | INFO     | will attempt to kill all subprocesses of pid=2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:39,732 | INFO     | process IDs to be killed: [2441622] (in reverse order)
[2025-11-26 11:56:33] 2025-11-26 16:55:39,873 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:56:33] 2025-11-26 16:55:39,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:56:33] 2025-11-26 16:55:39,889 | INFO     | did not find any defunct processes belonging to 2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:39,906 | INFO     | did not find any defunct processes belonging to 2441622
[2025-11-26 11:56:33] 2025-11-26 16:55:39,907 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:56:33] 2025-11-26 16:55:39,907 | INFO     | ready for new job
[2025-11-26 11:56:33] 2025-11-26 16:55:39,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:56:33] 2025-11-26 16:55:39,913 | INFO     | ***************************************
[2025-11-26 11:56:33] 2025-11-26 16:55:39,913 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:56:33] 2025-11-26 16:55:39,913 | INFO     | ***************************************
[2025-11-26 11:56:33] 2025-11-26 16:55:39,913 | INFO     | 
[2025-11-26 11:56:33] 2025-11-26 16:55:39,916 | INFO     | architecture information:
[2025-11-26 11:56:33] 2025-11-26 16:55:39,916 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:56:33] 2025-11-26 16:55:39,940 | INFO     | cat /etc/os-release:
[2025-11-26 11:56:33] NAME="CentOS Linux"
[2025-11-26 11:56:33] VERSION="7 (Core)"
[2025-11-26 11:56:33] ID="centos"
[2025-11-26 11:56:33] ID_LIKE="rhel fedora"
[2025-11-26 11:56:33] VERSION_ID="7"
[2025-11-26 11:56:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:56:33] ANSI_COLOR="0;31"
[2025-11-26 11:56:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:56:33] HOME_URL="https://www.centos.org/"
[2025-11-26 11:56:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:56:33] 
[2025-11-26 11:56:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:56:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:56:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:56:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:56:33] 
[2025-11-26 11:56:33] 2025-11-26 16:55:39,940 | INFO     | ***************************************
[2025-11-26 11:56:33] 2025-11-26 16:55:40,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 11:56:33] 2025-11-26 16:55:40,516 | INFO     | sufficient remaining disk space (72578236416 B)
[2025-11-26 11:56:33] 2025-11-26 16:55:40,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:56:33] 2025-11-26 16:55:40,517 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:56:33] 2025-11-26 16:55:40,517 | INFO     | update_server=False
[2025-11-26 11:56:33] 2025-11-26 16:55:40,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:56:33] 2025-11-26 16:55:40,736 | INFO     | all data control threads have been joined
[2025-11-26 11:56:33] 2025-11-26 16:55:40,909 | INFO     | all payload control threads have been joined
[2025-11-26 11:56:33] 2025-11-26 16:55:41,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:56:33] 2025-11-26 16:55:41,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:56:33] 2025-11-26 16:55:41,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:56:33] 2025-11-26 16:55:41,204 | INFO     | aborting loop
[2025-11-26 11:56:33] 2025-11-26 16:55:41,522 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:41,579 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:41,741 | INFO     | [data] control thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:41,769 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:41,915 | INFO     | [payload] control thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,087 | INFO     | all job control threads have been joined
[2025-11-26 11:56:33] 2025-11-26 16:55:42,211 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:56:33] 2025-11-26 16:55:42,452 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,709 | INFO     | [job] validate thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,968 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:42,983 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:43,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:43,098 | INFO     | [job] control thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:43,205 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:43,266 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:55:45,143 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:56:33] 2025-11-26 16:56:10,445 | INFO     | PID=2435203 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:56:33] 2025-11-26 16:56:10,446 | INFO     | .. there are 43 such processes running
[2025-11-26 11:56:33] 2025-11-26 16:56:10,446 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:56:33] 2025-11-26 16:56:10,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:56:33] 2025-11-26 16:56:10,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:56:33] 2025-11-26 16:56:27,623 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:56:33] 2025-11-26 16:56:27,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911519102784)>', '<ExcThread(monitor, started 139911042692864)>']
[2025-11-26 11:56:33] 2025-11-26 16:56:28,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:56:33] 2025-11-26 16:56:28,576 | INFO     | [monitor] control thread has ended
[2025-11-26 11:56:33] 2025-11-26 16:56:32,865 | INFO     | all workflow threads have been joined
[2025-11-26 11:56:33] 2025-11-26 16:56:32,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:56:33] 2025-11-26 16:56:32,865 | INFO     | traces error code: 0
[2025-11-26 11:56:33] 2025-11-26 16:56:32,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:56:33] 2025-11-26 16:56:33,096 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:56:33] 2025-11-26 16:56:33,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:56:33] 2025-11-26 16:56:33,128 [wrapper] pilotpid: 2435203
[2025-11-26 11:56:33] 2025-11-26 16:56:33,132 [wrapper] Pilot exit status: 0
[2025-11-26 11:56:33] 2025-11-26 16:56:33,166 [wrapper] pandaids: 6895374711
[2025-11-26 11:56:33] 2025-11-26 16:56:33,255 [wrapper] cleanup supervisor_pilot 3609449 2435204
[2025-11-26 11:56:33] 2025-11-26 16:56:33,259 [wrapper] Test setup, not cleaning
[2025-11-26 11:56:33] 2025-11-26 16:56:33,264 [wrapper] apfmon messages muted
[2025-11-26 11:56:33] 2025-11-26 16:56:33,267 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:56:33] 2025-11-26 16:56:33,270 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:56:33]  *** Error codes and diagnostics ***
[2025-11-26 11:56:33]     "exeErrorCode": 0,
[2025-11-26 11:56:33]     "exeErrorDiag": "",
[2025-11-26 11:56:33]     "pilotErrorCode": 0,
[2025-11-26 11:56:33]     "pilotErrorDiag": "",
[2025-11-26 11:56:33]  *** Listing of results directory ***
[2025-11-26 11:56:33] total 1330480
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:29 queuedata.json
[2025-11-26 11:56:33] -rwx------. 1 boincer umatlas     36292 Nov 23 18:30 runpilot2-wrapper.sh
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas       100 Nov 25 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:56:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 14:28 run_atlas
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas       105 Nov 25 14:28 job.xml
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas 410676238 Nov 25 14:28 EVNT.47483658._000947.pool.root.1
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:28 start_atlas.sh
[2025-11-26 11:56:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 14:28 shared
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 14:28 input.tar.gz
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas         0 Nov 25 14:28 boinc_lockfile
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 14:28 pandaJob.out
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas        57 Nov 25 14:28 setup.sh.local
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas    991893 Nov 25 14:29 agis_schedconf.cvmfs.json
[2025-11-26 11:56:33] drwx------. 5 boincer umatlas      4096 Nov 25 14:29 pilot3
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas       533 Nov 26 11:40 boinc_task_state.xml
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas      6656 Nov 26 11:54 init_data.xml
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas 922111831 Nov 26 11:54 HITS.47556137._009340.pool.root.1
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas      1070 Nov 26 11:55 memory_monitor_summary.json
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas   2491843 Nov 26 11:55 log.47556137._009340.job.log.tgz.1
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas      8641 Nov 26 11:55 heartbeat.json
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas        95 Nov 26 11:56 pilot_heartbeat.json
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas        29 Nov 26 11:56 wrapper_checkpoint.txt
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:56 boinc_mmap_file
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas      4824 Nov 26 11:56 pilotlog.txt
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas  10358945 Nov 26 11:56 log.47556137._009340.job.log.1
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas       353 Nov 26 11:56 output.list
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas       620 Nov 26 11:56 runtime_log
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas  12871680 Nov 26 11:56 result.tar.gz
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 11:56 runtime_log.err
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas       661 Nov 26 11:56 I4qNDmpiYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmipIKDmjQ3r7n.diag
[2025-11-26 11:56:33] -rw-r--r--. 1 boincer umatlas     21115 Nov 26 11:56 stderr.txt
[2025-11-26 11:56:33] HITS file was successfully produced:
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas 922111831 Nov 26 11:54 shared/HITS.pool.root.1
[2025-11-26 11:56:33]  *** Contents of shared directory: ***
[2025-11-26 11:56:33] total 1314724
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas 410676238 Nov 25 14:28 ATLAS.root_0
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:28 start_atlas.sh
[2025-11-26 11:56:33] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 14:28 input.tar.gz
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas 922111831 Nov 26 11:54 HITS.pool.root.1
[2025-11-26 11:56:33] -rw-------. 1 boincer umatlas  12871680 Nov 26 11:56 result.tar.gz
11:56:35 (2429651): run_atlas exited; CPU time 306942.912378
11:56:35 (2429651): called boinc_finish(0)

</stderr_txt>
]]>

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