Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:19 (5404): wrapper (7.7.26015): starting
06:25:19 (5404): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 06:25:19] Arguments: --nthreads 8
[2025-11-25 06:25:19] Threads: 8
[2025-11-25 06:25:19] Checking for CVMFS
[2025-11-25 06:25:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:25:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:25:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:25:19] 2.11.2.0 16446 116161 135428 153281 0 82 16188362 18432001 1885 130560 0 83201117 99.974 4823483 30175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:25:19] CVMFS is ok
[2025-11-25 06:25:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:25:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:25:19] Further information can be found at the LHC@home message board.
[2025-11-25 06:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:25:19] Checking for apptainer binary...
[2025-11-25 06:25:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:25:19] Running /usr/bin/apptainer --version
[2025-11-25 06:25:19] apptainer version 1.3.2-1.el7
[2025-11-25 06:25:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:25:20] c-206-26.aglt2.org
[2025-11-25 06:25:20] apptainer works
[2025-11-25 06:25:20] Set ATHENA_PROC_NUMBER=8
[2025-11-25 06:25:20] Set ATHENA_CORE_NUMBER=8
[2025-11-25 06:25:20] Starting ATLAS job with PandaID=6895375660
[2025-11-25 06:25:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:08:35]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:08:35] 2025-11-26 07:07:59,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:08:35] 2025-11-26 07:07:59,597 | INFO     | time since job start (70948s) is within the limit (172800.0s)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,479 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:08:35] 2025-11-26 07:08:01,483 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.75
[2025-11-26 02:08:35] 2025-11-26 07:08:01,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895375660/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,487 | INFO     | extracted standard info from prmon json
[2025-11-26 02:08:35] 2025-11-26 07:08:01,487 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:08:35] 2025-11-26 07:08:01,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:08:35] 2025-11-26 07:08:01,503 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:08:35] 2025-11-26 07:08:01,504 | INFO     | sum of square deviations: 487772518965.3158
[2025-11-26 02:08:35] 2025-11-26 07:08:01,534 | INFO     | sum of deviations: 1851990217832.589
[2025-11-26 02:08:35] 2025-11-26 07:08:01,534 | INFO     | mean x: 1764105398.5683577
[2025-11-26 02:08:35] 2025-11-26 07:08:01,534 | INFO     | mean y: 2872114.2441960447
[2025-11-26 02:08:35] 2025-11-26 07:08:01,534 | INFO     | intersect: -6695139385.67504
[2025-11-26 02:08:35] 2025-11-26 07:08:01,535 | INFO     | chi2: 5.822204925947476
[2025-11-26 02:08:35] 2025-11-26 07:08:01,537 | INFO     | sum of square deviations: 481508593816.1936
[2025-11-26 02:08:35] 2025-11-26 07:08:01,562 | INFO     | sum of deviations: 2210085804877.636
[2025-11-26 02:08:35] 2025-11-26 07:08:01,562 | INFO     | mean x: 1764105246.0708117
[2025-11-26 02:08:35] 2025-11-26 07:08:01,562 | INFO     | mean y: 2880827.9922279795
[2025-11-26 02:08:35] 2025-11-26 07:08:01,562 | INFO     | intersect: -8094220683.221028
[2025-11-26 02:08:35] 2025-11-26 07:08:01,563 | INFO     | chi2: 3.0668079361440395
[2025-11-26 02:08:35] 2025-11-26 07:08:01,563 | INFO     | current chi2=3.0668079361440395 (change=47.32566140919606 %)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,564 | INFO     | sum of square deviations: 475298530142.0576
[2025-11-26 02:08:35] 2025-11-26 07:08:01,590 | INFO     | sum of deviations: 2360074614187.3413
[2025-11-26 02:08:35] 2025-11-26 07:08:01,590 | INFO     | mean x: 1764105093.573287
[2025-11-26 02:08:35] 2025-11-26 07:08:01,590 | INFO     | mean y: 2884509.30962706
[2025-11-26 02:08:35] 2025-11-26 07:08:01,590 | INFO     | intersect: -8756704220.864927
[2025-11-26 02:08:35] 2025-11-26 07:08:01,591 | INFO     | chi2: 2.490999451126585
[2025-11-26 02:08:35] 2025-11-26 07:08:01,591 | INFO     | current chi2=2.490999451126585 (change=18.77549872723462 %)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,591 | INFO     | right removable region: 1152
[2025-11-26 02:08:35] 2025-11-26 07:08:01,592 | INFO     | sum of square deviations: 481508261305.3338
[2025-11-26 02:08:35] 2025-11-26 07:08:01,609 | INFO     | time since job start (70950s) is within the limit (172800.0s)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,625 | INFO     | sum of deviations: 1551682302978.3516
[2025-11-26 02:08:35] 2025-11-26 07:08:01,625 | INFO     | mean x: 1764105551.0699482
[2025-11-26 02:08:35] 2025-11-26 07:08:01,625 | INFO     | mean y: 2879416.872193437
[2025-11-26 02:08:35] 2025-11-26 07:08:01,626 | INFO     | intersect: -5682031069.9394045
[2025-11-26 02:08:35] 2025-11-26 07:08:01,627 | INFO     | chi2: 3.7877876734855964
[2025-11-26 02:08:35] 2025-11-26 07:08:01,628 | INFO     | current chi2=3.7877876734855964 (change=34.94238485827273 %)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,629 | INFO     | sum of square deviations: 475297865364.3473
[2025-11-26 02:08:35] 2025-11-26 07:08:01,675 | INFO     | sum of deviations: 1475867943050.115
[2025-11-26 02:08:35] 2025-11-26 07:08:01,676 | INFO     | mean x: 1764105703.5715525
[2025-11-26 02:08:35] 2025-11-26 07:08:01,676 | INFO     | mean y: 2881278.192541197
[2025-11-26 02:08:35] 2025-11-26 07:08:01,676 | INFO     | intersect: -5474919582.657742
[2025-11-26 02:08:35] 2025-11-26 07:08:01,678 | INFO     | chi2: 3.7280020479278306
[2025-11-26 02:08:35] 2025-11-26 07:08:01,678 | INFO     | current chi2=3.7280020479278306 (change=1.5783784813563715 %)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,678 | INFO     | left removable region: 20
[2025-11-26 02:08:35] 2025-11-26 07:08:01,680 | INFO     | sum of square deviations: 449798337369.76624
[2025-11-26 02:08:35] 2025-11-26 07:08:01,723 | INFO     | sum of deviations: 1906178416668.2263
[2025-11-26 02:08:35] 2025-11-26 07:08:01,723 | INFO     | mean x: 1764105673.074205
[2025-11-26 02:08:35] 2025-11-26 07:08:01,723 | INFO     | mean y: 2896877.699646643
[2025-11-26 02:08:35] 2025-11-26 07:08:01,724 | INFO     | intersect: -7473120437.970519
[2025-11-26 02:08:35] 2025-11-26 07:08:01,725 | INFO     | chi2: 0.29762911030803496
[2025-11-26 02:08:35] 2025-11-26 07:08:01,725 | INFO     | current memory leak: 4.24 B/s (using 1132 data points, chi2=0.30)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,727 | INFO     | could have reported an average CPU frequency of 2625 MHz (42 samples)
[2025-11-26 02:08:35] 2025-11-26 07:08:01,727 | INFO     | ..............................
[2025-11-26 02:08:35] 2025-11-26 07:08:01,727 | INFO     | . Timing measurements:
[2025-11-26 02:08:35] 2025-11-26 07:08:01,727 | INFO     | . get job = 0 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,727 | INFO     | . initial setup = 2 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | . payload setup = 5 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | . stage-in = 0 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | . payload execution = 70913 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | . stage-out = 4 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | . log creation = 0 s
[2025-11-26 02:08:35] 2025-11-26 07:08:01,728 | INFO     | ..............................
[2025-11-26 02:08:35] 2025-11-26 07:08:02,262 | INFO     | 
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | job summary report
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | --------------------------------------------------
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | PanDA job id: 6895375660
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | task id: 47556137
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | errors: (none)
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | pilot state: finished 
[2025-11-26 02:08:35] 2025-11-26 07:08:02,263 | INFO     | transexitcode: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | exeerrorcode: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | exeerrordiag: 
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | exitcode: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | exitmsg: OK
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | cpuconsumptiontime: 547090 s
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | nevents: 1000
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | neventsw: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | pid: 17578
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | pgrp: 17578
[2025-11-26 02:08:35] 2025-11-26 07:08:02,264 | INFO     | corecount: 8
[2025-11-26 02:08:35] 2025-11-26 07:08:02,265 | INFO     | event service: False
[2025-11-26 02:08:35] 2025-11-26 07:08:02,265 | INFO     | sizes: {0: 2284137, 1: 2284336, 4: 2284598, 12: 2284626, 70922: 2341477, 70927: 2350471, 70929: 2350655, 70935: 2350901}
[2025-11-26 02:08:35] 2025-11-26 07:08:02,265 | INFO     | --------------------------------------------------
[2025-11-26 02:08:35] 2025-11-26 07:08:02,265 | INFO     | 
[2025-11-26 02:08:35] 2025-11-26 07:08:02,265 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 02:08:35] 2025-11-26 07:08:02,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:08:35] 2025-11-26 07:08:02,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:08:35] 2025-11-26 07:08:02,283 | INFO     | job 6895375660 has completed (purged errors)
[2025-11-26 02:08:35] 2025-11-26 07:08:02,283 | INFO     | overall cleanup function is called
[2025-11-26 02:08:35] 2025-11-26 07:08:03,296 | INFO     | --- collectZombieJob: --- 10, [17578]
[2025-11-26 02:08:35] 2025-11-26 07:08:03,297 | INFO     | zombie collector waiting for pid 17578
[2025-11-26 02:08:35] 2025-11-26 07:08:03,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:08:35] 2025-11-26 07:08:03,297 | INFO     | collected zombie processes
[2025-11-26 02:08:35] 2025-11-26 07:08:03,297 | INFO     | will attempt to kill all subprocesses of pid=17578
[2025-11-26 02:08:35] 2025-11-26 07:08:03,452 | INFO     | process IDs to be killed: [17578] (in reverse order)
[2025-11-26 02:08:35] 2025-11-26 07:08:03,524 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:08:35] 2025-11-26 07:08:03,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:08:35] 2025-11-26 07:08:03,527 | INFO     | did not find any defunct processes belonging to 17578
[2025-11-26 02:08:35] 2025-11-26 07:08:03,530 | INFO     | did not find any defunct processes belonging to 17578
[2025-11-26 02:08:35] 2025-11-26 07:08:03,531 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:08:35] 2025-11-26 07:08:03,531 | INFO     | ready for new job
[2025-11-26 02:08:35] 2025-11-26 07:08:03,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:08:35] 2025-11-26 07:08:03,536 | INFO     | ***************************************
[2025-11-26 02:08:35] 2025-11-26 07:08:03,536 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:08:35] 2025-11-26 07:08:03,536 | INFO     | ***************************************
[2025-11-26 02:08:35] 2025-11-26 07:08:03,536 | INFO     | 
[2025-11-26 02:08:35] 2025-11-26 07:08:03,538 | INFO     | architecture information:
[2025-11-26 02:08:35] 2025-11-26 07:08:03,538 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:08:35] 2025-11-26 07:08:03,553 | INFO     | cat /etc/os-release:
[2025-11-26 02:08:35] NAME="CentOS Linux"
[2025-11-26 02:08:35] VERSION="7 (Core)"
[2025-11-26 02:08:35] ID="centos"
[2025-11-26 02:08:35] ID_LIKE="rhel fedora"
[2025-11-26 02:08:35] VERSION_ID="7"
[2025-11-26 02:08:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:08:35] ANSI_COLOR="0;31"
[2025-11-26 02:08:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:08:35] HOME_URL="https://www.centos.org/"
[2025-11-26 02:08:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:08:35] 
[2025-11-26 02:08:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:08:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:08:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:08:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:08:35] 
[2025-11-26 02:08:35] 2025-11-26 07:08:03,553 | INFO     | ***************************************
[2025-11-26 02:08:35] 2025-11-26 07:08:04,056 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 02:08:35] 2025-11-26 07:08:04,072 | INFO     | sufficient remaining disk space (24898437120 B)
[2025-11-26 02:08:35] 2025-11-26 07:08:04,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:08:35] 2025-11-26 07:08:04,072 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:08:35] 2025-11-26 07:08:04,073 | INFO     | update_server=False
[2025-11-26 02:08:35] 2025-11-26 07:08:04,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:08:35] 2025-11-26 07:08:04,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:08:35] 2025-11-26 07:08:04,073 | INFO     | aborting loop
[2025-11-26 02:08:35] 2025-11-26 07:08:04,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:08:35] 2025-11-26 07:08:05,005 | INFO     | all data control threads have been joined
[2025-11-26 02:08:35] 2025-11-26 07:08:05,078 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,079 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,092 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,093 | INFO     | [job] validate thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,181 | INFO     | all payload control threads have been joined
[2025-11-26 02:08:35] 2025-11-26 07:08:05,329 | INFO     | all job control threads have been joined
[2025-11-26 02:08:35] 2025-11-26 07:08:05,436 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,595 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:05,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:08:35] 2025-11-26 07:08:05,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,011 | INFO     | [data] control thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,152 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,187 | INFO     | [payload] control thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,335 | INFO     | [job] control thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,465 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,550 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,761 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:06,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:08:35] 2025-11-26 07:08:07,857 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:09,952 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:08:35] 2025-11-26 07:08:28,430 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:08:35] 2025-11-26 07:08:30,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415506495296)>', '<ExcThread(monitor, started 140415063799552)>']
[2025-11-26 02:08:35] 2025-11-26 07:08:34,834 | INFO     | PID=9840 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 02:08:35] 2025-11-26 07:08:34,835 | INFO     | .. there are 3 such processes running
[2025-11-26 02:08:35] 2025-11-26 07:08:34,835 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:08:35] 2025-11-26 07:08:34,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:08:35] 2025-11-26 07:08:34,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:08:35] 2025-11-26 07:08:34,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:08:35] 2025-11-26 07:08:34,836 | INFO     | [monitor] control thread has ended
[2025-11-26 02:08:35] 2025-11-26 07:08:35,056 | INFO     | all workflow threads have been joined
[2025-11-26 02:08:35] 2025-11-26 07:08:35,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:08:35] 2025-11-26 07:08:35,056 | INFO     | traces error code: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:35,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:08:35] 2025-11-26 07:08:35,182 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:08:35] 2025-11-26 07:08:35,185 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:08:35] 2025-11-26 07:08:35,187 [wrapper] pilotpid: 9840
[2025-11-26 02:08:35] 2025-11-26 07:08:35,189 [wrapper] Pilot exit status: 0
[2025-11-26 02:08:35] 2025-11-26 07:08:35,196 [wrapper] pandaids: 6895375660
[2025-11-26 02:08:35] 2025-11-26 07:08:35,223 [wrapper] cleanup supervisor_pilot 10585 9841
[2025-11-26 02:08:35] 2025-11-26 07:08:35,226 [wrapper] Test setup, not cleaning
[2025-11-26 02:08:35] 2025-11-26 07:08:35,228 [wrapper] apfmon messages muted
[2025-11-26 02:08:35] 2025-11-26 07:08:35,230 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:08:35] 2025-11-26 07:08:35,232 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:08:35]  *** Error codes and diagnostics ***
[2025-11-26 02:08:35]     "exeErrorCode": 0,
[2025-11-26 02:08:35]     "exeErrorDiag": "",
[2025-11-26 02:08:35]     "pilotErrorCode": 0,
[2025-11-26 02:08:35]     "pilotErrorDiag": "",
[2025-11-26 02:08:35]  *** Listing of results directory ***
[2025-11-26 02:08:35] total 1323992
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-26 02:08:35] -rwx------ 1 boincer umatlas     36292 Nov 23 18:56 runpilot2-wrapper.sh
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 18:56 queuedata.json
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:08:35] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:25 run_atlas
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:25 job.xml
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas 408947568 Nov 25 06:25 EVNT.47483658._000953.pool.root.1
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:25 start_atlas.sh
[2025-11-26 02:08:35] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:25 shared
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas    590093 Nov 25 06:25 input.tar.gz
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:25 boinc_lockfile
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas      2782 Nov 25 06:25 pandaJob.out
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas        57 Nov 25 06:25 setup.sh.local
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas    991894 Nov 25 06:25 agis_schedconf.cvmfs.json
[2025-11-26 02:08:35] drwx------ 5 boincer umatlas      4096 Nov 25 06:25 pilot3
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas       532 Nov 26 01:51 boinc_task_state.xml
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 02:04 init_data.xml
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas 918651587 Nov 26 02:07 HITS.47556137._009391.pool.root.1
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas      1068 Nov 26 02:07 memory_monitor_summary.json
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas        95 Nov 26 02:07 pilot_heartbeat.json
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas   1516240 Nov 26 02:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas   2318179 Nov 26 02:07 log.47556137._009391.job.log.tgz.1
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas      8661 Nov 26 02:08 heartbeat.json
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 02:08 boinc_mmap_file
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas        29 Nov 26 02:08 wrapper_checkpoint.txt
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas      4820 Nov 26 02:08 pilotlog.txt
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas   9809750 Nov 26 02:08 log.47556137._009391.job.log.1
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas       353 Nov 26 02:08 output.list
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas       620 Nov 26 02:08 runtime_log
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas  12144640 Nov 26 02:08 result.tar.gz
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas       668 Nov 26 02:08 tqxKDmo7Yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWILKDm20f5Vm.diag
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 02:08 runtime_log.err
[2025-11-26 02:08:35] -rw-r--r-- 1 boincer umatlas     21294 Nov 26 02:08 stderr.txt
[2025-11-26 02:08:35] HITS file was successfully produced:
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas 918651587 Nov 26 02:07 shared/HITS.pool.root.1
[2025-11-26 02:08:35]  *** Contents of shared directory: ***
[2025-11-26 02:08:35] total 1308948
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas 408947568 Nov 25 06:25 ATLAS.root_0
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:25 start_atlas.sh
[2025-11-26 02:08:35] -rw-r--r-- 2 boincer umatlas    590093 Nov 25 06:25 input.tar.gz
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas 918651587 Nov 26 02:07 HITS.pool.root.1
[2025-11-26 02:08:35] -rw------- 1 boincer umatlas  12144640 Nov 26 02:08 result.tar.gz
02:08:36 (5404): run_atlas exited; CPU time 545893.432170
02:08:36 (5404): called boinc_finish(0)

</stderr_txt>
]]>

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