Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:32:54 (3965551): wrapper (7.7.26015): starting
12:32:54 (3965551): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 12:32:54] Arguments: --nthreads 4
[2025-11-25 12:32:54] Threads: 4
[2025-11-25 12:32:54] Checking for CVMFS
[2025-11-25 12:32:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:32:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:32:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:32:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:32:54] 2.13.2.0 2433702 2297 55904 153281 3 56 2774029 4096000 845 130560 0 1034581 99.968 84784 642 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 12:32:54] CVMFS is ok
[2025-11-25 12:32:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:32:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 12:32:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 12:32:54] Further information can be found at the LHC@home message board.
[2025-11-25 12:32:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:32:54] Checking for apptainer binary...
[2025-11-25 12:32:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:32:54] Running /usr/bin/apptainer --version
[2025-11-25 12:32:54] apptainer version 1.4.2
[2025-11-25 12:32:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:32:55] Obake-chan
[2025-11-25 12:32:55] apptainer works
[2025-11-25 12:32:55] Set ATHENA_PROC_NUMBER=4
[2025-11-25 12:32:55] Set ATHENA_CORE_NUMBER=4
[2025-11-25 12:32:55] Starting ATLAS job with PandaID=6895358064
[2025-11-25 12:32:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:11:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:11:30] 2025-11-25 23:10:55,988 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895358064/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:11:30] 2025-11-25 23:10:56,123 | INFO     | number of running child processes to parent process 3976099: 1
[2025-11-26 00:11:30] 2025-11-25 23:10:56,123 | INFO     | maximum number of monitored processes: 12
[2025-11-26 00:11:30] 2025-11-25 23:10:57,561 | INFO     | time since job start (41873s) is within the limit (172800.0s)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,230 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 00:11:30] 2025-11-25 23:10:58,232 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2199.480125
[2025-11-26 00:11:30] 2025-11-25 23:10:58,235 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895358064/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,235 | INFO     | extracted standard info from prmon json
[2025-11-26 00:11:30] 2025-11-25 23:10:58,235 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:11:30] 2025-11-25 23:10:58,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:11:30] 2025-11-25 23:10:58,242 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:11:30] 2025-11-25 23:10:58,243 | INFO     | sum of square deviations: 100103635047.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,250 | INFO     | sum of deviations: 185154919702.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,250 | INFO     | mean x: 1764091301.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,250 | INFO     | mean y: 2312419.2172011663
[2025-11-26 00:11:30] 2025-11-25 23:10:58,250 | INFO     | intersect: -3260607884.5472174
[2025-11-26 00:11:30] 2025-11-25 23:10:58,250 | INFO     | chi2: 2.4201383423026273
[2025-11-26 00:11:30] 2025-11-25 23:10:58,251 | INFO     | sum of square deviations: 97930691980.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,258 | INFO     | sum of deviations: 262825458757.99997
[2025-11-26 00:11:30] 2025-11-25 23:10:58,258 | INFO     | mean x: 1764091149.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,258 | INFO     | mean y: 2317854.81938326
[2025-11-26 00:11:30] 2025-11-25 23:10:58,258 | INFO     | intersect: -4732133175.318761
[2025-11-26 00:11:30] 2025-11-25 23:10:58,259 | INFO     | chi2: 1.6030554290247536
[2025-11-26 00:11:30] 2025-11-25 23:10:58,259 | INFO     | current chi2=1.6030554290247536 (change=33.76182671030552 %)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,259 | INFO     | sum of square deviations: 95789423925.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,266 | INFO     | sum of deviations: 256235842349.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,266 | INFO     | mean x: 1764090996.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,266 | INFO     | mean y: 2317385.5133136096
[2025-11-26 00:11:30] 2025-11-25 23:10:58,266 | INFO     | intersect: -4716610069.601835
[2025-11-26 00:11:30] 2025-11-25 23:10:58,267 | INFO     | chi2: 1.6028351085892925
[2025-11-26 00:11:30] 2025-11-25 23:10:58,267 | INFO     | current chi2=1.6028351085892925 (change=0.013743781498260416 %)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,267 | INFO     | right removable region: 675
[2025-11-26 00:11:30] 2025-11-25 23:10:58,267 | INFO     | sum of square deviations: 97930691980.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,274 | INFO     | sum of deviations: 82452780973.99998
[2025-11-26 00:11:30] 2025-11-25 23:10:58,274 | INFO     | mean x: 1764091454.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,274 | INFO     | mean y: 2319603.5330396476
[2025-11-26 00:11:30] 2025-11-25 23:10:58,274 | INFO     | intersect: -1482957824.1448197
[2025-11-26 00:11:30] 2025-11-25 23:10:58,275 | INFO     | chi2: 0.919283559044663
[2025-11-26 00:11:30] 2025-11-25 23:10:58,275 | INFO     | current chi2=0.919283559044663 (change=62.015247518039985 %)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,276 | INFO     | sum of square deviations: 95789423925.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,282 | INFO     | sum of deviations: 75586836486.99997
[2025-11-26 00:11:30] 2025-11-25 23:10:58,282 | INFO     | mean x: 1764091606.5
[2025-11-26 00:11:30] 2025-11-25 23:10:58,282 | INFO     | mean y: 2320091.9585798816
[2025-11-26 00:11:30] 2025-11-25 23:10:58,282 | INFO     | intersect: -1389713583.0012689
[2025-11-26 00:11:30] 2025-11-25 23:10:58,283 | INFO     | chi2: 0.917041866722468
[2025-11-26 00:11:30] 2025-11-25 23:10:58,283 | INFO     | current chi2=0.917041866722468 (change=0.24385210636471777 %)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,283 | INFO     | left removable region: 20
[2025-11-26 00:11:30] 2025-11-25 23:10:58,284 | INFO     | sum of square deviations: 87136740760.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,290 | INFO     | sum of deviations: 140672747454.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,290 | INFO     | mean x: 1764091576.0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,290 | INFO     | mean y: 2325568.438167939
[2025-11-26 00:11:30] 2025-11-25 23:10:58,290 | INFO     | intersect: -2845607537.527785
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | chi2: 0.09522706063535616
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | current memory leak: 1.61 B/s (using 655 data points, chi2=0.10)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | could have reported an average CPU frequency of 2199 MHz (27 samples)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | ..............................
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | . Timing measurements:
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | . get job = 0 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | . initial setup = 1 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,291 | INFO     | . payload setup = 5 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,292 | INFO     | . stage-in = 0 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,292 | INFO     | . payload execution = 41841 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,292 | INFO     | . stage-out = 2 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,292 | INFO     | . log creation = 0 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,292 | INFO     | ..............................
[2025-11-26 00:11:30] 2025-11-25 23:10:58,349 | INFO     | 
[2025-11-26 00:11:30] 2025-11-25 23:10:58,349 | INFO     | job summary report
[2025-11-26 00:11:30] 2025-11-25 23:10:58,349 | INFO     | --------------------------------------------------
[2025-11-26 00:11:30] 2025-11-25 23:10:58,349 | INFO     | PanDA job id: 6895358064
[2025-11-26 00:11:30] 2025-11-25 23:10:58,349 | INFO     | task id: 47556137
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | errors: (none)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | pilot state: finished 
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | transexitcode: 0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | exeerrorcode: 0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | exeerrordiag: 
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | exitcode: 0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | exitmsg: OK
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | cpuconsumptiontime: 166992 s
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | nevents: 1000
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | neventsw: 0
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | pid: 3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:58,350 | INFO     | pgrp: 3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | corecount: 4
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | event service: False
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | sizes: {0: 2284271, 4: 2284533, 11: 2284561, 41851: 2329506, 41854: 2338514, 41856: 2338570, 41859: 2338944}
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | --------------------------------------------------
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | 
[2025-11-26 00:11:30] 2025-11-25 23:10:58,351 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:11:30] 2025-11-25 23:10:58,370 | INFO     | job 6895358064 has completed (purged errors)
[2025-11-26 00:11:30] 2025-11-25 23:10:58,370 | INFO     | overall cleanup function is called
[2025-11-26 00:11:30] 2025-11-25 23:10:59,386 | INFO     | --- collectZombieJob: --- 10, [3976099]
[2025-11-26 00:11:30] 2025-11-25 23:10:59,386 | INFO     | zombie collector waiting for pid 3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:59,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:11:30] 2025-11-25 23:10:59,386 | INFO     | collected zombie processes
[2025-11-26 00:11:30] 2025-11-25 23:10:59,386 | INFO     | will attempt to kill all subprocesses of pid=3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:59,512 | INFO     | process IDs to be killed: [3976099] (in reverse order)
[2025-11-26 00:11:30] 2025-11-25 23:10:59,557 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:11:30] 2025-11-25 23:10:59,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:11:30] 2025-11-25 23:10:59,560 | INFO     | did not find any defunct processes belonging to 3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:59,563 | INFO     | did not find any defunct processes belonging to 3976099
[2025-11-26 00:11:30] 2025-11-25 23:10:59,564 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:11:30] 2025-11-25 23:10:59,564 | INFO     | ready for new job
[2025-11-26 00:11:30] 2025-11-25 23:10:59,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:11:30] 2025-11-25 23:10:59,568 | INFO     | ***************************************
[2025-11-26 00:11:30] 2025-11-25 23:10:59,568 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:11:30] 2025-11-25 23:10:59,568 | INFO     | ***************************************
[2025-11-26 00:11:30] 2025-11-25 23:10:59,568 | INFO     | 
[2025-11-26 00:11:30] 2025-11-25 23:10:59,569 | INFO     | architecture information:
[2025-11-26 00:11:30] 2025-11-25 23:10:59,569 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:11:30] 2025-11-25 23:10:59,581 | INFO     | cat /etc/os-release:
[2025-11-26 00:11:30] NAME="CentOS Linux"
[2025-11-26 00:11:30] VERSION="7 (Core)"
[2025-11-26 00:11:30] ID="centos"
[2025-11-26 00:11:30] ID_LIKE="rhel fedora"
[2025-11-26 00:11:30] VERSION_ID="7"
[2025-11-26 00:11:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:11:30] ANSI_COLOR="0;31"
[2025-11-26 00:11:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:11:30] HOME_URL="https://www.centos.org/"
[2025-11-26 00:11:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:11:30] 
[2025-11-26 00:11:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:11:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:11:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:11:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:11:30] 
[2025-11-26 00:11:30] 2025-11-25 23:10:59,581 | INFO     | ***************************************
[2025-11-26 00:11:30] 2025-11-25 23:11:00,084 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | INFO     | sufficient remaining disk space (80366010368 B)
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | INFO     | update_server=False
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:11:30] 2025-11-25 23:11:00,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:11:30] 2025-11-25 23:11:00,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:11:30] 2025-11-25 23:11:00,098 | INFO     | aborting loop
[2025-11-26 00:11:30] 2025-11-25 23:11:00,459 | INFO     | all job control threads have been joined
[2025-11-26 00:11:30] 2025-11-25 23:11:00,816 | INFO     | all data control threads have been joined
[2025-11-26 00:11:30] 2025-11-25 23:11:01,098 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,100 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,102 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,116 | INFO     | all payload control threads have been joined
[2025-11-26 00:11:30] 2025-11-25 23:11:01,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:11:30] 2025-11-25 23:11:01,216 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,283 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:11:30] 2025-11-25 23:11:01,305 | INFO     | [job] validate thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,351 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,434 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,464 | INFO     | [job] control thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,821 | INFO     | [data] control thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:01,982 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:02,121 | INFO     | [payload] control thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:02,315 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:03,180 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:05,081 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:11:30] 2025-11-25 23:11:05,294 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:11:30] 2025-11-25 23:11:06,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124267051296576)>', '<ExcThread(monitor, started 124266414597888)>']
[2025-11-26 00:11:30] 2025-11-25 23:11:11,952 | INFO     | all workflow threads have been joined
[2025-11-26 00:11:30] 2025-11-25 23:11:11,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:11:30] 2025-11-25 23:11:11,953 | INFO     | traces error code: 0
[2025-11-26 00:11:30] 2025-11-25 23:11:11,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:11:30] 2025-11-25 23:11:30,786 | INFO     | PID=3969402 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:11:30] 2025-11-25 23:11:30,786 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:11:30] 2025-11-25 23:11:30,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:11:30] 2025-11-25 23:11:30,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:11:30] 2025-11-25 23:11:30,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:11:30] 2025-11-25 23:11:30,787 | INFO     | [monitor] control thread has ended
[2025-11-26 00:11:30] 2025-11-25 23:11:30,856 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:11:30] 2025-11-25 23:11:30,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:11:30] 2025-11-25 23:11:30,860 [wrapper] pilotpid: 3969402
[2025-11-26 00:11:30] 2025-11-25 23:11:30,863 [wrapper] Pilot exit status: 0
[2025-11-26 00:11:30] 2025-11-25 23:11:30,872 [wrapper] pandaids: 6895358064
[2025-11-26 00:11:30] 2025-11-25 23:11:30,903 [wrapper] cleanup supervisor_pilot  217767 3969403
[2025-11-26 00:11:30] 2025-11-25 23:11:30,906 [wrapper] Test setup, not cleaning
[2025-11-26 00:11:30] 2025-11-25 23:11:30,908 [wrapper] apfmon messages muted
[2025-11-26 00:11:30] 2025-11-25 23:11:30,910 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:11:30] 2025-11-25 23:11:30,913 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:11:30]  *** Error codes and diagnostics ***
[2025-11-26 00:11:30]     "exeErrorCode": 0,
[2025-11-26 00:11:30]     "exeErrorDiag": "",
[2025-11-26 00:11:30]     "pilotErrorCode": 0,
[2025-11-26 00:11:30]     "pilotErrorDiag": "",
[2025-11-26 00:11:30]  *** Listing of results directory ***
[2025-11-26 00:11:30] insgesamt 1314528
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc    576529 Nov 23 13:14 pilot3.tar.gz
[2025-11-26 00:11:30] -rwx------ 1 boinc boinc     36292 Nov 23 13:19 runpilot2-wrapper.sh
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc      5112 Nov 23 13:19 queuedata.json
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc       100 Nov 25 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:11:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 12:32 run_atlas
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc       105 Nov 25 12:32 job.xml
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc 408821536 Nov 25 12:32 EVNT.47483658._000727.pool.root.1
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc      9700 Nov 25 12:32 init_data.xml
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:32 start_atlas.sh
[2025-11-26 00:11:30] drwxrwx--x 2 boinc boinc      4096 Nov 25 12:32 shared
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc    590099 Nov 25 12:32 input.tar.gz
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc         0 Nov 25 12:32 boinc_lockfile
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc      2785 Nov 25 12:32 pandaJob.out
[2025-11-26 00:11:30] -rw------- 1 boinc boinc    991894 Nov 25 12:33 agis_schedconf.cvmfs.json
[2025-11-26 00:11:30] drwx------ 5 boinc boinc      4096 Nov 25 12:33 pilot3
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc       532 Nov 26 00:05 boinc_task_state.xml
[2025-11-26 00:11:30] -rw------- 1 boinc boinc 918717124 Nov 26 00:10 HITS.47556137._007230.pool.root.1
[2025-11-26 00:11:30] -rw------- 1 boinc boinc        95 Nov 26 00:10 pilot_heartbeat.json
[2025-11-26 00:11:30] -rw------- 1 boinc boinc      1024 Nov 26 00:10 memory_monitor_summary.json
[2025-11-26 00:11:30] -rw------- 1 boinc boinc   1516240 Nov 26 00:10 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:11:30] -rw------- 1 boinc boinc   1466246 Nov 26 00:10 log.47556137._007230.job.log.tgz.1
[2025-11-26 00:11:30] -rw------- 1 boinc boinc      8549 Nov 26 00:10 heartbeat.json
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc      8192 Nov 26 00:11 boinc_mmap_file
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc        29 Nov 26 00:11 wrapper_checkpoint.txt
[2025-11-26 00:11:30] -rw------- 1 boinc boinc       747 Nov 26 00:11 pilotlog.txt
[2025-11-26 00:11:30] -rw------- 1 boinc boinc   5842180 Nov 26 00:11 log.47556137._007230.job.log.1
[2025-11-26 00:11:30] -rw------- 1 boinc boinc       353 Nov 26 00:11 output.list
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc       620 Nov 26 00:11 runtime_log
[2025-11-26 00:11:30] -rw------- 1 boinc boinc   7331840 Nov 26 00:11 result.tar.gz
[2025-11-26 00:11:30] -rw------- 1 boinc boinc       652 Nov 26 00:11 UXyNDm3EOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5sKKDmSqdBmn.diag
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc      8896 Nov 26 00:11 runtime_log.err
[2025-11-26 00:11:30] -rw-r--r-- 1 boinc boinc     21361 Nov 26 00:11 stderr.txt
[2025-11-26 00:11:30] HITS file was successfully produced:
[2025-11-26 00:11:30] -rw------- 1 boinc boinc 918717124 Nov 26 00:10 shared/HITS.pool.root.1
[2025-11-26 00:11:30]  *** Contents of shared directory: ***
[2025-11-26 00:11:30] insgesamt 1304192
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc 408821536 Nov 25 12:32 ATLAS.root_0
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:32 start_atlas.sh
[2025-11-26 00:11:30] -rw-r--r-- 2 boinc boinc    590099 Nov 25 12:32 input.tar.gz
[2025-11-26 00:11:30] -rw------- 1 boinc boinc 918717124 Nov 26 00:10 HITS.pool.root.1
[2025-11-26 00:11:30] -rw------- 1 boinc boinc   7331840 Nov 26 00:11 result.tar.gz
00:11:32 (3965551): run_atlas exited; CPU time 167106.200771
00:11:32 (3965551): called boinc_finish(0)

</stderr_txt>
]]>

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