Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:32 (23464): wrapper (7.7.26015): starting
06:37:32 (23464): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 06:37:32] Arguments: --nthreads 8
[2025-11-25 06:37:32] Threads: 8
[2025-11-25 06:37:32] Checking for CVMFS
[2025-11-25 06:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:37:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:37:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:37:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:37:32] 2.11.2.0 2466 116179 133884 153281 3 82 11497445 18432000 1885 130560 0 82312465 99.973 5020417 28228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:37:32] CVMFS is ok
[2025-11-25 06:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:37:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:37:32] Further information can be found at the LHC@home message board.
[2025-11-25 06:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:37:32] Checking for apptainer binary...
[2025-11-25 06:37:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:37:32] Running /usr/bin/apptainer --version
[2025-11-25 06:37:32] apptainer version 1.3.2-1.el7
[2025-11-25 06:37:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:37:33] c-206-20.aglt2.org
[2025-11-25 06:37:33] apptainer works
[2025-11-25 06:37:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 06:37:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 06:37:33] Starting ATLAS job with PandaID=6895361968
[2025-11-25 06:37:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:19:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:19:46] 2025-11-26 07:18:46,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:19:46] 2025-11-26 07:18:46,825 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 02:19:46] 2025-11-26 07:18:46,830 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.0833333333335
[2025-11-26 02:19:46] 2025-11-26 07:18:46,833 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895361968/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:19:46] 2025-11-26 07:18:46,833 | INFO     | extracted standard info from prmon json
[2025-11-26 02:19:46] 2025-11-26 07:18:46,833 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:19:46] 2025-11-26 07:18:46,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:19:46] 2025-11-26 07:18:46,849 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:19:46] 2025-11-26 07:18:46,850 | INFO     | sum of square deviations: 486513740616.082
[2025-11-26 02:19:46] 2025-11-26 07:18:46,875 | INFO     | sum of deviations: 2030718699152.4397
[2025-11-26 02:19:46] 2025-11-26 07:18:46,875 | INFO     | mean x: 1764106101.1170397
[2025-11-26 02:19:46] 2025-11-26 07:18:46,875 | INFO     | mean y: 2868527.7908777967
[2025-11-26 02:19:46] 2025-11-26 07:18:46,875 | INFO     | intersect: -7360547852.37304
[2025-11-26 02:19:46] 2025-11-26 07:18:46,876 | INFO     | chi2: 5.9857197880754445
[2025-11-26 02:19:46] 2025-11-26 07:18:46,877 | INFO     | sum of square deviations: 480260623446.6711
[2025-11-26 02:19:46] 2025-11-26 07:18:46,901 | INFO     | sum of deviations: 2398208861515.229
[2025-11-26 02:19:46] 2025-11-26 07:18:46,901 | INFO     | mean x: 1764105948.6197062
[2025-11-26 02:19:46] 2025-11-26 07:18:46,901 | INFO     | mean y: 2877486.139152982
[2025-11-26 02:19:46] 2025-11-26 07:18:46,901 | INFO     | intersect: -8806286355.5042
[2025-11-26 02:19:46] 2025-11-26 07:18:46,902 | INFO     | chi2: 3.0639587992623563
[2025-11-26 02:19:46] 2025-11-26 07:18:46,902 | INFO     | current chi2=3.0639587992623563 (change=48.81219121940397 %)
[2025-11-26 02:19:46] 2025-11-26 07:18:46,904 | INFO     | sum of square deviations: 474061321239.7418
[2025-11-26 02:19:46] 2025-11-26 07:18:46,934 | INFO     | sum of deviations: 2554513840066.0864
[2025-11-26 02:19:46] 2025-11-26 07:18:46,934 | INFO     | mean x: 1764105796.1223958
[2025-11-26 02:19:46] 2025-11-26 07:18:46,934 | INFO     | mean y: 2881330.027777778
[2025-11-26 02:19:46] 2025-11-26 07:18:46,934 | INFO     | intersect: -9503130803.06602
[2025-11-26 02:19:46] 2025-11-26 07:18:46,936 | INFO     | chi2: 2.4446811479672657
[2025-11-26 02:19:46] 2025-11-26 07:18:46,936 | INFO     | current chi2=2.4446811479672657 (change=20.211683376557833 %)
[2025-11-26 02:19:46] 2025-11-26 07:18:46,936 | INFO     | right removable region: 1151
[2025-11-26 02:19:46] 2025-11-26 07:18:46,938 | INFO     | sum of square deviations: 480260186076.6713
[2025-11-26 02:19:46] 2025-11-26 07:18:46,975 | INFO     | sum of deviations: 1722514797627.4836
[2025-11-26 02:19:46] 2025-11-26 07:18:46,976 | INFO     | mean x: 1764106253.6197062
[2025-11-26 02:19:46] 2025-11-26 07:18:46,976 | INFO     | mean y: 2876035.2420051857
[2025-11-26 02:19:46] 2025-11-26 07:18:46,976 | INFO     | intersect: -6324317462.2469
[2025-11-26 02:19:46] 2025-11-26 07:18:46,977 | INFO     | chi2: 3.8236584005917837
[2025-11-26 02:19:46] 2025-11-26 07:18:46,977 | INFO     | current chi2=3.8236584005917837 (change=36.12032410522873 %)
[2025-11-26 02:19:46] 2025-11-26 07:18:46,978 | INFO     | sum of square deviations: 474060587532.2285
[2025-11-26 02:19:46] 2025-11-26 07:18:47,002 | INFO     | sum of deviations: 1648491809960.993
[2025-11-26 02:19:46] 2025-11-26 07:18:47,002 | INFO     | mean x: 1764106406.1206598
[2025-11-26 02:19:46] 2025-11-26 07:18:47,002 | INFO     | mean y: 2877855.748263889
[2025-11-26 02:19:46] 2025-11-26 07:18:47,002 | INFO     | intersect: -6131601657.784221
[2025-11-26 02:19:46] 2025-11-26 07:18:47,003 | INFO     | chi2: 3.7720225461870216
[2025-11-26 02:19:46] 2025-11-26 07:18:47,003 | INFO     | current chi2=3.7720225461870216 (change=1.3504306346186814 %)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,004 | INFO     | left removable region: 20
[2025-11-26 02:19:46] 2025-11-26 07:18:47,005 | INFO     | sum of square deviations: 448605542566.7957
[2025-11-26 02:19:46] 2025-11-26 07:18:47,027 | INFO     | sum of deviations: 2082301326226.4155
[2025-11-26 02:19:46] 2025-11-26 07:18:47,027 | INFO     | mean x: 1764106375.6259947
[2025-11-26 02:19:46] 2025-11-26 07:18:47,028 | INFO     | mean y: 2893528.8496905393
[2025-11-26 02:19:46] 2025-11-26 07:18:47,028 | INFO     | intersect: -8185594345.268645
[2025-11-26 02:19:46] 2025-11-26 07:18:47,029 | INFO     | chi2: 0.1776298431729634
[2025-11-26 02:19:46] 2025-11-26 07:18:47,029 | INFO     | current memory leak: 4.64 B/s (using 1131 data points, chi2=0.18)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,030 | INFO     | could have reported an average CPU frequency of 2622 MHz (42 samples)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,030 | INFO     | ..............................
[2025-11-26 02:19:46] 2025-11-26 07:18:47,030 | INFO     | . Timing measurements:
[2025-11-26 02:19:46] 2025-11-26 07:18:47,030 | INFO     | . get job = 0 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . initial setup = 2 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . payload setup = 5 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . stage-in = 0 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . payload execution = 70829 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . stage-out = 4 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,031 | INFO     | . log creation = 0 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,032 | INFO     | ..............................
[2025-11-26 02:19:46] 2025-11-26 07:18:47,232 | INFO     | 
[2025-11-26 02:19:46] 2025-11-26 07:18:47,232 | INFO     | job summary report
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | --------------------------------------------------
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | PanDA job id: 6895361968
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | task id: 47556149
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | errors: (none)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:19:46] 2025-11-26 07:18:47,233 | INFO     | pilot state: finished 
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | transexitcode: 0
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | exeerrorcode: 0
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | exeerrordiag: 
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | exitcode: 0
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | exitmsg: OK
[2025-11-26 02:19:46] 2025-11-26 07:18:47,234 | INFO     | cpuconsumptiontime: 545263 s
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | nevents: 1000
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | neventsw: 0
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | pid: 3317
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | pgrp: 3317
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | corecount: 8
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | event service: False
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | sizes: {0: 2284144, 1: 2284343, 4: 2284605, 12: 2284633, 70838: 2341487, 70839: 2341486, 70843: 2350720, 70847: 2350910}
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | --------------------------------------------------
[2025-11-26 02:19:46] 2025-11-26 07:18:47,235 | INFO     | 
[2025-11-26 02:19:46] 2025-11-26 07:18:47,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 02:19:46] 2025-11-26 07:18:47,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:19:46] 2025-11-26 07:18:47,256 | INFO     | job 6895361968 has completed (purged errors)
[2025-11-26 02:19:46] 2025-11-26 07:18:47,256 | INFO     | overall cleanup function is called
[2025-11-26 02:19:46] 2025-11-26 07:18:48,272 | INFO     | --- collectZombieJob: --- 10, [3317]
[2025-11-26 02:19:46] 2025-11-26 07:18:48,272 | INFO     | zombie collector waiting for pid 3317
[2025-11-26 02:19:46] 2025-11-26 07:18:48,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:19:46] 2025-11-26 07:18:48,272 | INFO     | collected zombie processes
[2025-11-26 02:19:46] 2025-11-26 07:18:48,272 | INFO     | will attempt to kill all subprocesses of pid=3317
[2025-11-26 02:19:46] 2025-11-26 07:18:48,430 | INFO     | process IDs to be killed: [3317] (in reverse order)
[2025-11-26 02:19:46] 2025-11-26 07:18:48,481 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:19:46] 2025-11-26 07:18:48,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:19:46] 2025-11-26 07:18:48,484 | INFO     | did not find any defunct processes belonging to 3317
[2025-11-26 02:19:46] 2025-11-26 07:18:48,487 | INFO     | did not find any defunct processes belonging to 3317
[2025-11-26 02:19:46] 2025-11-26 07:18:48,492 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:19:46] 2025-11-26 07:18:48,492 | INFO     | ready for new job
[2025-11-26 02:19:46] 2025-11-26 07:18:48,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:19:46] 2025-11-26 07:18:48,498 | INFO     | ***************************************
[2025-11-26 02:19:46] 2025-11-26 07:18:48,499 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:19:46] 2025-11-26 07:18:48,499 | INFO     | ***************************************
[2025-11-26 02:19:46] 2025-11-26 07:18:48,499 | INFO     | 
[2025-11-26 02:19:46] 2025-11-26 07:18:48,500 | INFO     | architecture information:
[2025-11-26 02:19:46] 2025-11-26 07:18:48,501 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:19:46] 2025-11-26 07:18:48,512 | INFO     | cat /etc/os-release:
[2025-11-26 02:19:46] NAME="CentOS Linux"
[2025-11-26 02:19:46] VERSION="7 (Core)"
[2025-11-26 02:19:46] ID="centos"
[2025-11-26 02:19:46] ID_LIKE="rhel fedora"
[2025-11-26 02:19:46] VERSION_ID="7"
[2025-11-26 02:19:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:19:46] ANSI_COLOR="0;31"
[2025-11-26 02:19:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:19:46] HOME_URL="https://www.centos.org/"
[2025-11-26 02:19:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:19:46] 
[2025-11-26 02:19:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:19:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:19:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:19:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:19:46] 
[2025-11-26 02:19:46] 2025-11-26 07:18:48,513 | INFO     | ***************************************
[2025-11-26 02:19:46] 2025-11-26 07:18:49,016 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 02:19:46] 2025-11-26 07:18:49,030 | INFO     | sufficient remaining disk space (26262634496 B)
[2025-11-26 02:19:46] 2025-11-26 07:18:49,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:19:46] 2025-11-26 07:18:49,031 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:19:46] 2025-11-26 07:18:49,031 | INFO     | update_server=False
[2025-11-26 02:19:46] 2025-11-26 07:18:49,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:19:46] 2025-11-26 07:18:49,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:19:46] 2025-11-26 07:18:49,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:19:46] 2025-11-26 07:18:49,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:19:46] 2025-11-26 07:18:49,167 | INFO     | all job control threads have been joined
[2025-11-26 02:19:46] 2025-11-26 07:18:49,232 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 02:19:46] 2025-11-26 07:18:49,232 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 02:19:46] 2025-11-26 07:18:49,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:19:46] 2025-11-26 07:18:49,232 | INFO     | will abort loop
[2025-11-26 02:19:46] 2025-11-26 07:18:49,545 | INFO     | all payload control threads have been joined
[2025-11-26 02:19:46] 2025-11-26 07:18:49,561 | INFO     | all data control threads have been joined
[2025-11-26 02:19:46] 2025-11-26 07:18:50,036 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,038 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,172 | INFO     | [job] control thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,238 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,247 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,550 | INFO     | [payload] control thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,566 | INFO     | [data] control thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,737 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,795 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:50,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:51,038 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:51,042 | INFO     | [job] validate thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:51,190 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:51,242 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:18:53,047 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:19:46] 2025-11-26 07:19:19,348 | INFO     | PID=27132 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:19:46] 2025-11-26 07:19:19,348 | INFO     | .. there are 3 such processes running
[2025-11-26 02:19:46] 2025-11-26 07:19:19,349 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:19:46] 2025-11-26 07:19:19,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:19:46] 2025-11-26 07:19:19,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:19:46] 2025-11-26 07:19:41,507 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:19:46] 2025-11-26 07:19:41,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405614217024)>', '<ExcThread(monitor, started 140404963931904)>']
[2025-11-26 02:19:46] 2025-11-26 07:19:42,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:19:46] 2025-11-26 07:19:42,462 | INFO     | [monitor] control thread has ended
[2025-11-26 02:19:46] 2025-11-26 07:19:46,640 | INFO     | all workflow threads have been joined
[2025-11-26 02:19:46] 2025-11-26 07:19:46,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:19:46] 2025-11-26 07:19:46,640 | INFO     | traces error code: 0
[2025-11-26 02:19:46] 2025-11-26 07:19:46,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:19:46] 2025-11-26 07:19:46,762 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:19:46] 2025-11-26 07:19:46,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:19:46] 2025-11-26 07:19:46,768 [wrapper] pilotpid: 27132
[2025-11-26 02:19:46] 2025-11-26 07:19:46,771 [wrapper] Pilot exit status: 0
[2025-11-26 02:19:46] 2025-11-26 07:19:46,781 [wrapper] pandaids: 6895361968
[2025-11-26 02:19:46] 2025-11-26 07:19:46,812 [wrapper] cleanup supervisor_pilot 18349 27133
[2025-11-26 02:19:46] 2025-11-26 07:19:46,814 [wrapper] Test setup, not cleaning
[2025-11-26 02:19:46] 2025-11-26 07:19:46,816 [wrapper] apfmon messages muted
[2025-11-26 02:19:46] 2025-11-26 07:19:46,818 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:19:46] 2025-11-26 07:19:46,820 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:19:46]  *** Error codes and diagnostics ***
[2025-11-26 02:19:46]     "exeErrorCode": 0,
[2025-11-26 02:19:46]     "exeErrorDiag": "",
[2025-11-26 02:19:46]     "pilotErrorCode": 0,
[2025-11-26 02:19:46]     "pilotErrorDiag": "",
[2025-11-26 02:19:46]  *** Listing of results directory ***
[2025-11-26 02:19:46] total 1331328
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 09:56 pilot3.tar.gz
[2025-11-26 02:19:46] -rwx------ 1 boincer umatlas     36292 Nov 23 09:57 runpilot2-wrapper.sh
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 09:57 queuedata.json
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:19:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:37 run_atlas
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:37 job.xml
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas 410324551 Nov 25 06:37 EVNT.47483658._001169.pool.root.1
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:37 start_atlas.sh
[2025-11-26 02:19:46] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:37 shared
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 06:37 input.tar.gz
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:37 boinc_lockfile
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 06:37 pandaJob.out
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas        57 Nov 25 06:37 setup.sh.local
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas    991894 Nov 25 06:37 agis_schedconf.cvmfs.json
[2025-11-26 02:19:46] drwx------ 5 boincer umatlas      4096 Nov 25 06:37 pilot3
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas       532 Nov 26 02:06 boinc_task_state.xml
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas 924787602 Nov 26 02:18 HITS.47556149._001559.pool.root.1
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 02:18 init_data.xml
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas      1067 Nov 26 02:18 memory_monitor_summary.json
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas   1516240 Nov 26 02:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas   2327582 Nov 26 02:18 log.47556149._001559.job.log.tgz.1
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas      8663 Nov 26 02:18 heartbeat.json
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas        95 Nov 26 02:19 pilot_heartbeat.json
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas        29 Nov 26 02:19 wrapper_checkpoint.txt
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 02:19 boinc_mmap_file
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas      5007 Nov 26 02:19 pilotlog.txt
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas   9792977 Nov 26 02:19 log.47556149._001559.job.log.1
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas       353 Nov 26 02:19 output.list
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas       620 Nov 26 02:19 runtime_log
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas  12144640 Nov 26 02:19 result.tar.gz
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas       668 Nov 26 02:19 upqKDmwhQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsaIKDmQHNHIn.diag
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 02:19 runtime_log.err
[2025-11-26 02:19:46] -rw-r--r-- 1 boincer umatlas     21288 Nov 26 02:19 stderr.txt
[2025-11-26 02:19:46] HITS file was successfully produced:
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas 924787602 Nov 26 02:18 shared/HITS.pool.root.1
[2025-11-26 02:19:46]  *** Contents of shared directory: ***
[2025-11-26 02:19:46] total 1316288
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas 410324551 Nov 25 06:37 ATLAS.root_0
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:37 start_atlas.sh
[2025-11-26 02:19:46] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 06:37 input.tar.gz
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas 924787602 Nov 26 02:18 HITS.pool.root.1
[2025-11-26 02:19:46] -rw------- 1 boincer umatlas  12144640 Nov 26 02:19 result.tar.gz
02:19:47 (23464): run_atlas exited; CPU time 543912.777918
02:19:47 (23464): called boinc_finish(0)

</stderr_txt>
]]>

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