Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:04:03 (4148): wrapper (7.7.26015): starting
06:04:03 (4148): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 06:04:03] Arguments: --nthreads 12
[2025-11-25 06:04:03] Threads: 12
[2025-11-25 06:04:03] Checking for CVMFS
[2025-11-25 06:04:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:04:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:04:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:04:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:04:04] 2.11.2.0 2925 286158 94720 153279 2 81 17262916 20275201 1 130560 1 127749345 99.975 15723633 13669 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:04:04] CVMFS is ok
[2025-11-25 06:04:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:04:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:04:04] Further information can be found at the LHC@home message board.
[2025-11-25 06:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:04:04] Checking for apptainer binary...
[2025-11-25 06:04:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:04:04] Running /usr/bin/apptainer --version
[2025-11-25 06:04:04] apptainer version 1.3.2-1.el7
[2025-11-25 06:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:04:05] c-205-10.aglt2.org
[2025-11-25 06:04:05] apptainer works
[2025-11-25 06:04:05] Set ATHENA_PROC_NUMBER=12
[2025-11-25 06:04:05] Set ATHENA_CORE_NUMBER=12
[2025-11-25 06:04:05] Starting ATLAS job with PandaID=6895618821
[2025-11-25 06:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:17:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:17:40] 2025-11-25 20:17:04,720 | INFO     | time since job start (33163s) is within the limit (172800.0s)
[2025-11-25 15:17:40] 2025-11-25 20:17:06,410 | INFO     | monitor loop #2495: job 0:6895618821 is in state 'finished'
[2025-11-25 15:17:40] 2025-11-25 20:17:06,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:17:40] 2025-11-25 20:17:06,724 | INFO     | time since job start (33165s) is within the limit (172800.0s)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,429 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 15:17:40] 2025-11-25 20:17:07,433 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-25 15:17:40] 2025-11-25 20:17:07,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895618821/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,437 | INFO     | extracted standard info from prmon json
[2025-11-25 15:17:40] 2025-11-25 20:17:07,437 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:17:40] 2025-11-25 20:17:07,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:17:40] 2025-11-25 20:17:07,445 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:17:40] 2025-11-25 20:17:07,445 | INFO     | sum of square deviations: 49919751437.99247
[2025-11-25 15:17:40] 2025-11-25 20:17:07,451 | INFO     | sum of deviations: 706893041834.7429
[2025-11-25 15:17:40] 2025-11-25 20:17:07,452 | INFO     | mean x: 1764085251.6213236
[2025-11-25 15:17:40] 2025-11-25 20:17:07,452 | INFO     | mean y: 3425095.7463235296
[2025-11-25 15:17:40] 2025-11-25 20:17:07,452 | INFO     | intersect: -24977059655.332283
[2025-11-25 15:17:40] 2025-11-25 20:17:07,452 | INFO     | chi2: 6.4529069798294145
[2025-11-25 15:17:40] 2025-11-25 20:17:07,453 | INFO     | sum of square deviations: 48555913437.91875
[2025-11-25 15:17:40] 2025-11-25 20:17:07,459 | INFO     | sum of deviations: 920194265932.7355
[2025-11-25 15:17:40] 2025-11-25 20:17:07,459 | INFO     | mean x: 1764085099.122449
[2025-11-25 15:17:40] 2025-11-25 20:17:07,459 | INFO     | mean y: 3448920.261595547
[2025-11-25 15:17:40] 2025-11-25 20:17:07,459 | INFO     | intersect: -33428132897.374954
[2025-11-25 15:17:40] 2025-11-25 20:17:07,460 | INFO     | chi2: 3.274327471495098
[2025-11-25 15:17:40] 2025-11-25 20:17:07,460 | INFO     | current chi2=3.274327471495098 (change=49.25810209677536 %)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,461 | INFO     | sum of square deviations: 47217145675.34275
[2025-11-25 15:17:40] 2025-11-25 20:17:07,466 | INFO     | sum of deviations: 988179866271.0055
[2025-11-25 15:17:40] 2025-11-25 20:17:07,467 | INFO     | mean x: 1764084946.6235955
[2025-11-25 15:17:40] 2025-11-25 20:17:07,467 | INFO     | mean y: 3456637.8408239703
[2025-11-25 15:17:40] 2025-11-25 20:17:07,467 | INFO     | intersect: -36916039483.99976
[2025-11-25 15:17:40] 2025-11-25 20:17:07,467 | INFO     | chi2: 2.7088253856005298
[2025-11-25 15:17:40] 2025-11-25 20:17:07,467 | INFO     | current chi2=2.7088253856005298 (change=17.27078585809113 %)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,468 | INFO     | right removable region: 533
[2025-11-25 15:17:40] 2025-11-25 20:17:07,468 | INFO     | sum of square deviations: 48555873177.91877
[2025-11-25 15:17:40] 2025-11-25 20:17:07,474 | INFO     | sum of deviations: 520313484761.7554
[2025-11-25 15:17:40] 2025-11-25 20:17:07,474 | INFO     | mean x: 1764085404.122449
[2025-11-25 15:17:40] 2025-11-25 20:17:07,474 | INFO     | mean y: 3445912.912801484
[2025-11-25 15:17:40] 2025-11-25 20:17:07,474 | INFO     | intersect: -18900084473.061478
[2025-11-25 15:17:40] 2025-11-25 20:17:07,475 | INFO     | chi2: 4.026553467639271
[2025-11-25 15:17:40] 2025-11-25 20:17:07,475 | INFO     | current chi2=4.026553467639271 (change=37.60093737248147 %)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,476 | INFO     | sum of square deviations: 47217065155.34276
[2025-11-25 15:17:40] 2025-11-25 20:17:07,481 | INFO     | sum of deviations: 464807783923.0676
[2025-11-25 15:17:40] 2025-11-25 20:17:07,482 | INFO     | mean x: 1764085556.6235955
[2025-11-25 15:17:40] 2025-11-25 20:17:07,482 | INFO     | mean y: 3452233.756554307
[2025-11-25 15:17:40] 2025-11-25 20:17:07,482 | INFO     | intersect: -17362317864.98334
[2025-11-25 15:17:40] 2025-11-25 20:17:07,482 | INFO     | chi2: 3.924810624064376
[2025-11-25 15:17:40] 2025-11-25 20:17:07,483 | INFO     | current chi2=3.924810624064376 (change=2.5267972819083386 %)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,483 | INFO     | left removable region: 20
[2025-11-25 15:17:40] 2025-11-25 20:17:07,483 | INFO     | sum of square deviations: 41862742238.01571
[2025-11-25 15:17:40] 2025-11-25 20:17:07,489 | INFO     | sum of deviations: 663409935255.2203
[2025-11-25 15:17:40] 2025-11-25 20:17:07,489 | INFO     | mean x: 1764085526.1247563
[2025-11-25 15:17:40] 2025-11-25 20:17:07,489 | INFO     | mean y: 3494157.762183236
[2025-11-25 15:17:40] 2025-11-25 20:17:07,489 | INFO     | intersect: -27952435198.636536
[2025-11-25 15:17:40] 2025-11-25 20:17:07,489 | INFO     | chi2: 0.09007740599126628
[2025-11-25 15:17:40] 2025-11-25 20:17:07,490 | INFO     | current memory leak: 15.85 B/s (using 513 data points, chi2=0.09)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,490 | INFO     | could have reported an average CPU frequency of 2442 MHz (22 samples)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,490 | INFO     | ..............................
[2025-11-25 15:17:40] 2025-11-25 20:17:07,490 | INFO     | . Timing measurements:
[2025-11-25 15:17:40] 2025-11-25 20:17:07,490 | INFO     | . get job = 0 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . initial setup = 2 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . payload setup = 7 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . stage-in = 0 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . payload execution = 33128 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . stage-out = 3 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | . log creation = 0 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,491 | INFO     | ..............................
[2025-11-25 15:17:40] 2025-11-25 20:17:07,571 | INFO     | 
[2025-11-25 15:17:40] 2025-11-25 20:17:07,571 | INFO     | job summary report
[2025-11-25 15:17:40] 2025-11-25 20:17:07,571 | INFO     | --------------------------------------------------
[2025-11-25 15:17:40] 2025-11-25 20:17:07,571 | INFO     | PanDA job id: 6895618821
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | task id: 47556149
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | errors: (none)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | pilot state: finished 
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | transexitcode: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:07,572 | INFO     | exeerrorcode: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | exeerrordiag: 
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | exitcode: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | exitmsg: OK
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | cpuconsumptiontime: 320138 s
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | nevents: 1000
[2025-11-25 15:17:40] 2025-11-25 20:17:07,573 | INFO     | neventsw: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | pid: 15107
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | pgrp: 15107
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | corecount: 12
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | event service: False
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 11: 2284582, 33139: 2325379, 33140: 2325378, 33144: 2334612, 33151: 2334802}
[2025-11-25 15:17:40] 2025-11-25 20:17:07,574 | INFO     | --------------------------------------------------
[2025-11-25 15:17:40] 2025-11-25 20:17:07,575 | INFO     | 
[2025-11-25 15:17:40] 2025-11-25 20:17:07,575 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 15:17:40] 2025-11-25 20:17:07,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:17:40] 2025-11-25 20:17:07,601 | INFO     | job 6895618821 has completed (purged errors)
[2025-11-25 15:17:40] 2025-11-25 20:17:07,602 | INFO     | overall cleanup function is called
[2025-11-25 15:17:40] 2025-11-25 20:17:08,615 | INFO     | --- collectZombieJob: --- 10, [15107]
[2025-11-25 15:17:40] 2025-11-25 20:17:08,615 | INFO     | zombie collector waiting for pid 15107
[2025-11-25 15:17:40] 2025-11-25 20:17:08,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:17:40] 2025-11-25 20:17:08,615 | INFO     | collected zombie processes
[2025-11-25 15:17:40] 2025-11-25 20:17:08,615 | INFO     | will attempt to kill all subprocesses of pid=15107
[2025-11-25 15:17:40] 2025-11-25 20:17:08,707 | INFO     | process IDs to be killed: [15107] (in reverse order)
[2025-11-25 15:17:40] 2025-11-25 20:17:08,758 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:17:40] 2025-11-25 20:17:08,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:17:40] 2025-11-25 20:17:08,762 | INFO     | did not find any defunct processes belonging to 15107
[2025-11-25 15:17:40] 2025-11-25 20:17:08,766 | INFO     | did not find any defunct processes belonging to 15107
[2025-11-25 15:17:40] 2025-11-25 20:17:08,768 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:17:40] 2025-11-25 20:17:08,768 | INFO     | ready for new job
[2025-11-25 15:17:40] 2025-11-25 20:17:08,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:17:40] 2025-11-25 20:17:08,772 | INFO     | ***************************************
[2025-11-25 15:17:40] 2025-11-25 20:17:08,772 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:17:40] 2025-11-25 20:17:08,772 | INFO     | ***************************************
[2025-11-25 15:17:40] 2025-11-25 20:17:08,772 | INFO     | 
[2025-11-25 15:17:40] 2025-11-25 20:17:08,773 | INFO     | architecture information:
[2025-11-25 15:17:40] 2025-11-25 20:17:08,774 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:17:40] 2025-11-25 20:17:08,790 | INFO     | cat /etc/os-release:
[2025-11-25 15:17:40] NAME="CentOS Linux"
[2025-11-25 15:17:40] VERSION="7 (Core)"
[2025-11-25 15:17:40] ID="centos"
[2025-11-25 15:17:40] ID_LIKE="rhel fedora"
[2025-11-25 15:17:40] VERSION_ID="7"
[2025-11-25 15:17:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:17:40] ANSI_COLOR="0;31"
[2025-11-25 15:17:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:17:40] HOME_URL="https://www.centos.org/"
[2025-11-25 15:17:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:17:40] 
[2025-11-25 15:17:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:17:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:17:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:17:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:17:40] 
[2025-11-25 15:17:40] 2025-11-25 20:17:08,791 | INFO     | ***************************************
[2025-11-25 15:17:40] 2025-11-25 20:17:09,294 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 15:17:40] 2025-11-25 20:17:09,312 | INFO     | sufficient remaining disk space (28250734592 B)
[2025-11-25 15:17:40] 2025-11-25 20:17:09,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:17:40] 2025-11-25 20:17:09,312 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:17:40] 2025-11-25 20:17:09,313 | INFO     | update_server=False
[2025-11-25 15:17:40] 2025-11-25 20:17:09,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:17:40] 2025-11-25 20:17:09,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:17:40] 2025-11-25 20:17:09,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:17:40] 2025-11-25 20:17:09,319 | INFO     | all job control threads have been joined
[2025-11-25 15:17:40] 2025-11-25 20:17:09,629 | INFO     | all payload control threads have been joined
[2025-11-25 15:17:40] 2025-11-25 20:17:09,815 | INFO     | all data control threads have been joined
[2025-11-25 15:17:40] 2025-11-25 20:17:09,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:17:40] 2025-11-25 20:17:09,917 | INFO     | aborting loop
[2025-11-25 15:17:40] 2025-11-25 20:17:10,317 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,318 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,324 | INFO     | [job] control thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,635 | INFO     | [payload] control thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,703 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:17:40] 2025-11-25 20:17:10,818 | INFO     | [data] control thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,893 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,897 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:10,921 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,323 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,339 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,356 | INFO     | [job] validate thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,356 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,764 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:11,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:17:40] 2025-11-25 20:17:11,905 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:15,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:17:40] 2025-11-25 20:17:16,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265907857216)>', '<ExcThread(monitor, started 140265067095808)>']
[2025-11-25 15:17:40] 2025-11-25 20:17:21,132 | INFO     | all workflow threads have been joined
[2025-11-25 15:17:40] 2025-11-25 20:17:21,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:17:40] 2025-11-25 20:17:21,132 | INFO     | traces error code: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:21,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:17:40] 2025-11-25 20:17:39,930 | INFO     | PID=7843 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 15:17:40] 2025-11-25 20:17:39,931 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:17:40] 2025-11-25 20:17:39,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:17:40] 2025-11-25 20:17:39,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:17:40] 2025-11-25 20:17:39,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:17:40] 2025-11-25 20:17:39,931 | INFO     | [monitor] control thread has ended
[2025-11-25 15:17:40] 2025-11-25 20:17:40,027 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:17:40] 2025-11-25 20:17:40,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:17:40] 2025-11-25 20:17:40,035 [wrapper] pilotpid: 7843
[2025-11-25 15:17:40] 2025-11-25 20:17:40,039 [wrapper] Pilot exit status: 0
[2025-11-25 15:17:40] 2025-11-25 20:17:40,055 [wrapper] pandaids: 6895618821
[2025-11-25 15:17:40] 2025-11-25 20:17:40,095 [wrapper] cleanup supervisor_pilot  9377 7844
[2025-11-25 15:17:40] 2025-11-25 20:17:40,100 [wrapper] Test setup, not cleaning
[2025-11-25 15:17:40] 2025-11-25 20:17:40,104 [wrapper] apfmon messages muted
[2025-11-25 15:17:40] 2025-11-25 20:17:40,108 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:17:40] 2025-11-25 20:17:40,112 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:17:40]  *** Error codes and diagnostics ***
[2025-11-25 15:17:40]     "exeErrorCode": 0,
[2025-11-25 15:17:40]     "exeErrorDiag": "",
[2025-11-25 15:17:40]     "pilotErrorCode": 0,
[2025-11-25 15:17:40]     "pilotErrorDiag": "",
[2025-11-25 15:17:40]  *** Listing of results directory ***
[2025-11-25 15:17:40] total 1312408
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 06:12 pilot3.tar.gz
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 06:41 queuedata.json
[2025-11-25 15:17:40] -rwx------ 1 boincer umatlas     36292 Nov 24 06:47 runpilot2-wrapper.sh
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:17:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:04 run_atlas
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:04 job.xml
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas 409877992 Nov 25 06:04 EVNT.47483658._001331.pool.root.1
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 06:04 input.tar.gz
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:04 start_atlas.sh
[2025-11-25 15:17:40] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:04 shared
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:04 boinc_lockfile
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 06:04 pandaJob.out
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas        57 Nov 25 06:04 setup.sh.local
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas    991894 Nov 25 06:04 agis_schedconf.cvmfs.json
[2025-11-25 15:17:40] drwx------ 5 boincer umatlas      4096 Nov 25 06:04 pilot3
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:07 boinc_task_state.xml
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 15:10 init_data.xml
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas 916244853 Nov 25 15:16 HITS.47556149._003176.pool.root.1
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas      1061 Nov 25 15:16 memory_monitor_summary.json
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas   1516240 Nov 25 15:17 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas   2278842 Nov 25 15:17 log.47556149._003176.job.log.tgz.1
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas      8665 Nov 25 15:17 heartbeat.json
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 15:17 boinc_mmap_file
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas        29 Nov 25 15:17 wrapper_checkpoint.txt
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas        95 Nov 25 15:17 pilot_heartbeat.json
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas       744 Nov 25 15:17 pilotlog.txt
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas   4656663 Nov 25 15:17 log.47556149._003176.job.log.1
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas       353 Nov 25 15:17 output.list
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas       620 Nov 25 15:17 runtime_log
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas   6952960 Nov 25 15:17 result.tar.gz
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas       670 Nov 25 15:17 tbDODmYDkh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDfLKDmXpeofm.diag
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 15:17 runtime_log.err
[2025-11-25 15:17:40] -rw-r--r-- 1 boincer umatlas     21325 Nov 25 15:17 stderr.txt
[2025-11-25 15:17:40] HITS file was successfully produced:
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas 916244853 Nov 25 15:16 shared/HITS.pool.root.1
[2025-11-25 15:17:40]  *** Contents of shared directory: ***
[2025-11-25 15:17:40] total 1302436
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas 409877992 Nov 25 06:04 ATLAS.root_0
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 06:04 input.tar.gz
[2025-11-25 15:17:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:04 start_atlas.sh
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas 916244853 Nov 25 15:16 HITS.pool.root.1
[2025-11-25 15:17:40] -rw------- 1 boincer umatlas   6952960 Nov 25 15:17 result.tar.gz
15:17:41 (4148): run_atlas exited; CPU time 308727.572503
15:17:41 (4148): called boinc_finish(0)

</stderr_txt>
]]>

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