Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:50:14 (27014): wrapper (7.7.26015): starting
06:50:14 (27014): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 06:50:14] Arguments: --nthreads 8
[2025-11-25 06:50:14] Threads: 8
[2025-11-25 06:50:14] Checking for CVMFS
[2025-11-25 06:50:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:50:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:50:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:50:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:50:14] 2.11.2.0 27562 332589 280100 153281 2 82 16665144 18432001 2827 130560 7 674970446 99.311 1127077916 26037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-25 06:50:14] CVMFS is ok
[2025-11-25 06:50:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:50:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:50:14] Further information can be found at the LHC@home message board.
[2025-11-25 06:50:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:50:14] Checking for apptainer binary...
[2025-11-25 06:50:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:50:14] Running /usr/bin/apptainer --version
[2025-11-25 06:50:14] apptainer version 1.3.2-1.el7
[2025-11-25 06:50:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:50:15] c-9-30.aglt2.org
[2025-11-25 06:50:15] apptainer works
[2025-11-25 06:50:15] Set ATHENA_PROC_NUMBER=8
[2025-11-25 06:50:15] Set ATHENA_CORE_NUMBER=8
[2025-11-25 06:50:15] Starting ATLAS job with PandaID=6895617971
[2025-11-25 06:50:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:51:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:51:15] 2025-11-26 04:50:43,236 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9119062500013
[2025-11-25 23:51:15] 2025-11-26 04:50:43,239 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895617971/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,240 | INFO     | extracted standard info from prmon json
[2025-11-25 23:51:15] 2025-11-26 04:50:43,240 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:51:15] 2025-11-26 04:50:43,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:51:15] 2025-11-26 04:50:43,251 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:51:15] 2025-11-26 04:50:43,252 | INFO     | sum of square deviations: 312882253096.16705
[2025-11-25 23:51:15] 2025-11-26 04:50:43,268 | INFO     | sum of deviations: 1706241554857.1416
[2025-11-25 23:51:15] 2025-11-26 04:50:43,268 | INFO     | mean x: 1764102014.65005
[2025-11-25 23:51:15] 2025-11-26 04:50:43,268 | INFO     | mean y: 2867590.148554337
[2025-11-25 23:51:15] 2025-11-26 04:50:43,268 | INFO     | intersect: -9617314234.219645
[2025-11-25 23:51:15] 2025-11-26 04:50:43,269 | INFO     | chi2: 4.250126528862431
[2025-11-25 23:51:15] 2025-11-26 04:50:43,270 | INFO     | sum of square deviations: 308226541401.5443
[2025-11-25 23:51:15] 2025-11-26 04:50:43,285 | INFO     | sum of deviations: 1967090241109.7983
[2025-11-25 23:51:15] 2025-11-26 04:50:43,285 | INFO     | monitor loop #4228: job 0:6895617971 is in state 'finished'
[2025-11-25 23:51:15] 2025-11-26 04:50:43,285 | INFO     | mean x: 1764101862.1533067
[2025-11-25 23:51:15] 2025-11-26 04:50:43,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,285 | INFO     | mean y: 2876128.1973947897
[2025-11-25 23:51:15] 2025-11-26 04:50:43,286 | INFO     | intersect: -11255555873.10334
[2025-11-25 23:51:15] 2025-11-26 04:50:43,286 | INFO     | chi2: 2.144046980404148
[2025-11-25 23:51:15] 2025-11-26 04:50:43,286 | INFO     | current chi2=2.144046980404148 (change=49.55333762785614 %)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,287 | INFO     | sum of square deviations: 303617249181.89984
[2025-11-25 23:51:15] 2025-11-26 04:50:43,302 | INFO     | sum of deviations: 2030016096223.8088
[2025-11-25 23:51:15] 2025-11-26 04:50:43,303 | INFO     | mean x: 1764101709.6565962
[2025-11-25 23:51:15] 2025-11-26 04:50:43,303 | INFO     | mean y: 2878207.547834844
[2025-11-25 23:51:15] 2025-11-26 04:50:43,303 | INFO     | intersect: -11792086919.197412
[2025-11-25 23:51:15] 2025-11-26 04:50:43,304 | INFO     | chi2: 1.9274279502775167
[2025-11-25 23:51:15] 2025-11-26 04:50:43,304 | INFO     | current chi2=1.9274279502775167 (change=10.103278151386363 %)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,304 | INFO     | right removable region: 992
[2025-11-25 23:51:15] 2025-11-26 04:50:43,305 | INFO     | sum of square deviations: 308226204620.849
[2025-11-25 23:51:15] 2025-11-26 04:50:43,320 | INFO     | sum of deviations: 1479454274391.6677
[2025-11-25 23:51:15] 2025-11-26 04:50:43,320 | INFO     | mean x: 1764102167.1523046
[2025-11-25 23:51:15] 2025-11-26 04:50:43,320 | INFO     | mean y: 2875005.883767535
[2025-11-25 23:51:15] 2025-11-26 04:50:43,320 | INFO     | intersect: -8464635064.739677
[2025-11-25 23:51:15] 2025-11-26 04:50:43,321 | INFO     | chi2: 2.5169238814769064
[2025-11-25 23:51:15] 2025-11-26 04:50:43,321 | INFO     | current chi2=2.5169238814769064 (change=40.7800246796282 %)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,322 | INFO     | sum of square deviations: 303616637108.8293
[2025-11-25 23:51:15] 2025-11-26 04:50:43,337 | INFO     | sum of deviations: 1416360138456.7124
[2025-11-25 23:51:15] 2025-11-26 04:50:43,337 | INFO     | mean x: 1764102319.653575
[2025-11-25 23:51:15] 2025-11-26 04:50:43,337 | INFO     | mean y: 2877092.644511581
[2025-11-25 23:51:15] 2025-11-26 04:50:43,337 | INFO     | intersect: -8226593563.210022
[2025-11-25 23:51:15] 2025-11-26 04:50:43,338 | INFO     | chi2: 2.471338442587834
[2025-11-25 23:51:15] 2025-11-26 04:50:43,338 | INFO     | current chi2=2.471338442587834 (change=1.8111568341241648 %)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,338 | INFO     | left removable region: 20
[2025-11-25 23:51:15] 2025-11-26 04:50:43,339 | INFO     | sum of square deviations: 284758407007.0004
[2025-11-25 23:51:15] 2025-11-26 04:50:43,354 | INFO     | sum of deviations: 1657403343400.1655
[2025-11-25 23:51:15] 2025-11-26 04:50:43,355 | INFO     | mean x: 1764102289.1666667
[2025-11-25 23:51:15] 2025-11-26 04:50:43,355 | INFO     | mean y: 2890497.8446502057
[2025-11-25 23:51:15] 2025-11-26 04:50:43,355 | INFO     | intersect: -10264862657.878126
[2025-11-25 23:51:15] 2025-11-26 04:50:43,356 | INFO     | chi2: 0.13202580725091836
[2025-11-25 23:51:15] 2025-11-26 04:50:43,357 | INFO     | current memory leak: 5.82 B/s (using 972 data points, chi2=0.13)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,358 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,358 | INFO     | ..............................
[2025-11-25 23:51:15] 2025-11-26 04:50:43,358 | INFO     | . Timing measurements:
[2025-11-25 23:51:15] 2025-11-26 04:50:43,358 | INFO     | . get job = 0 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . initial setup = 2 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . payload setup = 5 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . stage-in = 0 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . payload execution = 61180 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . stage-out = 3 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | . log creation = 0 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,359 | INFO     | ..............................
[2025-11-25 23:51:15] 2025-11-26 04:50:43,461 | INFO     | 
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | job summary report
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | --------------------------------------------------
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | PanDA job id: 6895617971
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | task id: 47556149
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | errors: (none)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | pilot state: finished 
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | transexitcode: 0
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | exeerrorcode: 0
[2025-11-25 23:51:15] 2025-11-26 04:50:43,462 | INFO     | exeerrordiag: 
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | exitcode: 0
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | exitmsg: OK
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | cpuconsumptiontime: 471081 s
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | nevents: 1000
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | neventsw: 0
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | pid: 38828
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | pgrp: 38828
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | corecount: 8
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | event service: False
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | sizes: {0: 2284314, 4: 2284576, 11: 2284604, 61189: 2337405, 61193: 2346399, 61196: 2346455, 61201: 2346829}
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | --------------------------------------------------
[2025-11-25 23:51:15] 2025-11-26 04:50:43,463 | INFO     | 
[2025-11-25 23:51:15] 2025-11-26 04:50:43,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 23:51:15] 2025-11-26 04:50:43,479 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | job 6895617971 has completed (purged errors)
[2025-11-25 23:51:15] 2025-11-26 04:50:43,481 | INFO     | overall cleanup function is called
[2025-11-25 23:51:15] 2025-11-26 04:50:44,494 | INFO     | --- collectZombieJob: --- 10, [38828]
[2025-11-25 23:51:15] 2025-11-26 04:50:44,495 | INFO     | zombie collector waiting for pid 38828
[2025-11-25 23:51:15] 2025-11-26 04:50:44,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:51:15] 2025-11-26 04:50:44,495 | INFO     | collected zombie processes
[2025-11-25 23:51:15] 2025-11-26 04:50:44,495 | INFO     | will attempt to kill all subprocesses of pid=38828
[2025-11-25 23:51:15] 2025-11-26 04:50:44,762 | INFO     | process IDs to be killed: [38828] (in reverse order)
[2025-11-25 23:51:15] 2025-11-26 04:50:44,862 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:51:15] 2025-11-26 04:50:44,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:51:15] 2025-11-26 04:50:44,874 | INFO     | did not find any defunct processes belonging to 38828
[2025-11-25 23:51:15] 2025-11-26 04:50:44,883 | INFO     | did not find any defunct processes belonging to 38828
[2025-11-25 23:51:15] 2025-11-26 04:50:44,885 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:51:15] 2025-11-26 04:50:44,885 | INFO     | ready for new job
[2025-11-25 23:51:15] 2025-11-26 04:50:44,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:51:15] 2025-11-26 04:50:44,889 | INFO     | ***************************************
[2025-11-25 23:51:15] 2025-11-26 04:50:44,889 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:51:15] 2025-11-26 04:50:44,889 | INFO     | ***************************************
[2025-11-25 23:51:15] 2025-11-26 04:50:44,889 | INFO     | 
[2025-11-25 23:51:15] 2025-11-26 04:50:44,891 | INFO     | architecture information:
[2025-11-25 23:51:15] 2025-11-26 04:50:44,891 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:51:15] 2025-11-26 04:50:44,902 | INFO     | cat /etc/os-release:
[2025-11-25 23:51:15] NAME="CentOS Linux"
[2025-11-25 23:51:15] VERSION="7 (Core)"
[2025-11-25 23:51:15] ID="centos"
[2025-11-25 23:51:15] ID_LIKE="rhel fedora"
[2025-11-25 23:51:15] VERSION_ID="7"
[2025-11-25 23:51:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:51:15] ANSI_COLOR="0;31"
[2025-11-25 23:51:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:51:15] HOME_URL="https://www.centos.org/"
[2025-11-25 23:51:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:51:15] 
[2025-11-25 23:51:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:51:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:51:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:51:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:51:15] 
[2025-11-25 23:51:15] 2025-11-26 04:50:44,903 | INFO     | ***************************************
[2025-11-25 23:51:15] 2025-11-26 04:50:45,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 23:51:15] 2025-11-26 04:50:45,418 | INFO     | sufficient remaining disk space (101910052864 B)
[2025-11-25 23:51:15] 2025-11-26 04:50:45,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:51:15] 2025-11-26 04:50:45,418 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:51:15] 2025-11-26 04:50:45,418 | INFO     | update_server=False
[2025-11-25 23:51:15] 2025-11-26 04:50:45,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:51:15] 2025-11-26 04:50:45,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:51:15] 2025-11-26 04:50:45,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:51:15] 2025-11-26 04:50:45,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:51:15] 2025-11-26 04:50:45,790 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 23:51:15] 2025-11-26 04:50:45,791 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 23:51:15] 2025-11-26 04:50:45,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:51:15] 2025-11-26 04:50:45,791 | INFO     | will abort loop
[2025-11-25 23:51:15] 2025-11-26 04:50:46,323 | INFO     | all data control threads have been joined
[2025-11-25 23:51:15] 2025-11-26 04:50:46,423 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:46,424 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:46,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:46,681 | INFO     | all payload control threads have been joined
[2025-11-25 23:51:15] 2025-11-26 04:50:46,796 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:46,808 | INFO     | all job control threads have been joined
[2025-11-25 23:51:15] 2025-11-26 04:50:46,872 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:46,939 | INFO     | [job] validate thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,053 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,329 | INFO     | [data] control thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,437 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,686 | INFO     | [payload] control thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,718 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,794 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,812 | INFO     | [job] control thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:47,880 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:50:49,427 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:51:15] 2025-11-26 04:51:09,335 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:51:15] 2025-11-26 04:51:09,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893264009024)>', '<ExcThread(monitor, started 139892822619904)>']
[2025-11-25 23:51:15] 2025-11-26 04:51:14,903 | INFO     | all workflow threads have been joined
[2025-11-25 23:51:15] 2025-11-26 04:51:14,905 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:51:15] 2025-11-26 04:51:14,905 | INFO     | traces error code: 0
[2025-11-25 23:51:15] 2025-11-26 04:51:14,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:51:15] 2025-11-26 04:51:14,963 | INFO     | PID=31288 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:51:15] 2025-11-26 04:51:14,963 | INFO     | .. there are 4 such processes running
[2025-11-25 23:51:15] 2025-11-26 04:51:14,964 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:51:15] 2025-11-26 04:51:14,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:51:15] 2025-11-26 04:51:14,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:51:15] 2025-11-26 04:51:14,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:51:15] 2025-11-26 04:51:14,965 | INFO     | [monitor] control thread has ended
[2025-11-25 23:51:15] 2025-11-26 04:51:15,057 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:51:15] 2025-11-26 04:51:15,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:51:15] 2025-11-26 04:51:15,062 [wrapper] pilotpid: 31288
[2025-11-25 23:51:15] 2025-11-26 04:51:15,064 [wrapper] Pilot exit status: 0
[2025-11-25 23:51:15] 2025-11-26 04:51:15,073 [wrapper] pandaids: 6895617971
[2025-11-25 23:51:15] 2025-11-26 04:51:15,136 [wrapper] cleanup supervisor_pilot 23384 31289
[2025-11-25 23:51:15] 2025-11-26 04:51:15,138 [wrapper] Test setup, not cleaning
[2025-11-25 23:51:15] 2025-11-26 04:51:15,141 [wrapper] apfmon messages muted
[2025-11-25 23:51:15] 2025-11-26 04:51:15,143 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:51:15] 2025-11-26 04:51:15,145 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:51:15]  *** Error codes and diagnostics ***
[2025-11-25 23:51:15]     "exeErrorCode": 0,
[2025-11-25 23:51:15]     "exeErrorDiag": "",
[2025-11-25 23:51:15]     "pilotErrorCode": 0,
[2025-11-25 23:51:15]     "pilotErrorDiag": "",
[2025-11-25 23:51:15]  *** Listing of results directory ***
[2025-11-25 23:51:15] total 1320096
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 06:12 pilot3.tar.gz
[2025-11-25 23:51:15] -rwx------ 1 boincer umatlas     36292 Nov 24 06:30 runpilot2-wrapper.sh
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 06:31 queuedata.json
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:51:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:50 run_atlas
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:50 job.xml
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas 410463100 Nov 25 06:50 EVNT.47483658._001327.pool.root.1
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:50 start_atlas.sh
[2025-11-25 23:51:15] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:50 shared
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 06:50 input.tar.gz
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:50 boinc_lockfile
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 06:50 pandaJob.out
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas        57 Nov 25 06:50 setup.sh.local
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas    991894 Nov 25 06:50 agis_schedconf.cvmfs.json
[2025-11-25 23:51:15] drwx------ 5 boincer umatlas      4096 Nov 25 06:50 pilot3
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas       533 Nov 25 23:39 boinc_task_state.xml
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas      6037 Nov 25 23:45 init_data.xml
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas 916304672 Nov 25 23:49 HITS.47556149._003140.pool.root.1
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas      1074 Nov 25 23:50 memory_monitor_summary.json
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas   1516240 Nov 25 23:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas   2202648 Nov 25 23:50 log.47556149._003140.job.log.tgz.1
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas      8648 Nov 25 23:50 heartbeat.json
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:50 boinc_mmap_file
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:50 wrapper_checkpoint.txt
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas        95 Nov 25 23:51 pilot_heartbeat.json
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas       820 Nov 25 23:51 pilotlog.txt
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas   8342518 Nov 25 23:51 log.47556149._003140.job.log.1
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas       353 Nov 25 23:51 output.list
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:51 runtime_log
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas  10567680 Nov 25 23:51 result.tar.gz
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas      9333 Nov 25 23:51 runtime_log.err
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas       665 Nov 25 23:51 5TELDmcxjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYeLKDm9v6uDn.diag
[2025-11-25 23:51:15] -rw-r--r-- 1 boincer umatlas     21313 Nov 25 23:51 stderr.txt
[2025-11-25 23:51:15] HITS file was successfully produced:
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas 916304672 Nov 25 23:49 shared/HITS.pool.root.1
[2025-11-25 23:51:15]  *** Contents of shared directory: ***
[2025-11-25 23:51:15] total 1306600
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas 410463100 Nov 25 06:50 ATLAS.root_0
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:50 start_atlas.sh
[2025-11-25 23:51:15] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 06:50 input.tar.gz
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas 916304672 Nov 25 23:49 HITS.pool.root.1
[2025-11-25 23:51:15] -rw------- 1 boincer umatlas  10567680 Nov 25 23:51 result.tar.gz
23:51:17 (27014): run_atlas exited; CPU time 471469.116584
23:51:17 (27014): called boinc_finish(0)

</stderr_txt>
]]>

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