Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:06 (2868456): wrapper (7.7.26015): starting
12:30:06 (2868456): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:30:06] Arguments: --nthreads 8
[2025-11-25 12:30:06] Threads: 8
[2025-11-25 12:30:06] Checking for CVMFS
[2025-11-25 12:30:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:30:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:30:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:30:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:30:06] 2.13.3.0 10954 28910 378072 153291 0 193 20282067 32935937 22445 16776704 26 127901948 99.459 189943440 39656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 12:30:06] CVMFS is ok
[2025-11-25 12:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:30:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:30:06] Further information can be found at the LHC@home message board.
[2025-11-25 12:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:30:06] Checking for apptainer binary...
[2025-11-25 12:30:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:30:06] Running /usr/bin/apptainer --version
[2025-11-25 12:30:06] apptainer version 1.4.4-1.el9
[2025-11-25 12:30:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:30:07] c7-11-13.aglt2.org
[2025-11-25 12:30:07] apptainer works
[2025-11-25 12:30:07] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:30:07] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:30:07] Starting ATLAS job with PandaID=6895617975
[2025-11-25 12:30:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:50:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:50:02] 2025-11-26 14:49:07,854 | INFO     | PID=2873124 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 09:50:02] 2025-11-26 14:49:07,855 | INFO     | .. there are 34 such processes running
[2025-11-26 09:50:02] 2025-11-26 14:49:08,360 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 09:50:02] 2025-11-26 14:49:08,369 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3270.919171875
[2025-11-26 09:50:02] 2025-11-26 14:49:08,392 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895617975/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,393 | INFO     | extracted standard info from prmon json
[2025-11-26 09:50:02] 2025-11-26 14:49:08,393 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:50:02] 2025-11-26 14:49:08,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:50:02] 2025-11-26 14:49:08,411 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:50:02] 2025-11-26 14:49:08,412 | INFO     | sum of square deviations: 614430339131.261
[2025-11-26 09:50:02] 2025-11-26 14:49:08,446 | INFO     | sum of deviations: 3369284640744.087
[2025-11-26 09:50:02] 2025-11-26 14:49:08,451 | INFO     | mean x: 1764130193.4267516
[2025-11-26 09:50:02] 2025-11-26 14:49:08,451 | INFO     | mean y: 2984966.789012739
[2025-11-26 09:50:02] 2025-11-26 14:49:08,451 | INFO     | intersect: -9670783378.357533
[2025-11-26 09:50:02] 2025-11-26 14:49:08,452 | INFO     | chi2: 5.102742335210613
[2025-11-26 09:50:02] 2025-11-26 14:49:08,454 | INFO     | sum of square deviations: 607123118588.2611
[2025-11-26 09:50:02] 2025-11-26 14:49:08,520 | INFO     | sum of deviations: 3749980486413.863
[2025-11-26 09:50:02] 2025-11-26 14:49:08,520 | INFO     | mean x: 1764130040.9384491
[2025-11-26 09:50:02] 2025-11-26 14:49:08,520 | INFO     | mean y: 2992909.4788169465
[2025-11-26 09:50:02] 2025-11-26 14:49:08,520 | INFO     | intersect: -10893401950.922049
[2025-11-26 09:50:02] 2025-11-26 14:49:08,521 | INFO     | chi2: 2.619700230720047
[2025-11-26 09:50:02] 2025-11-26 14:49:08,521 | INFO     | current chi2=2.619700230720047 (change=48.660934481381766 %)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,526 | INFO     | sum of square deviations: 599873704137.8788
[2025-11-26 09:50:02] 2025-11-26 14:49:08,604 | INFO     | sum of deviations: 3759533268523.1265
[2025-11-26 09:50:02] 2025-11-26 14:49:08,604 | INFO     | mean x: 1764129888.446228
[2025-11-26 09:50:02] 2025-11-26 14:49:08,604 | INFO     | mean y: 2993108.1958266455
[2025-11-26 09:50:02] 2025-11-26 14:49:08,604 | INFO     | intersect: -11053175815.130032
[2025-11-26 09:50:02] 2025-11-26 14:49:08,605 | INFO     | chi2: 2.537023201840796
[2025-11-26 09:50:02] 2025-11-26 14:49:08,605 | INFO     | current chi2=2.537023201840796 (change=3.1559728823067053 %)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,605 | INFO     | right removable region: 1245
[2025-11-26 09:50:02] 2025-11-26 14:49:08,607 | INFO     | sum of square deviations: 607120876228.2611
[2025-11-26 09:50:02] 2025-11-26 14:49:08,674 | INFO     | sum of deviations: 3018891726549.1865
[2025-11-26 09:50:02] 2025-11-26 14:49:08,675 | INFO     | mean x: 1764130345.9384491
[2025-11-26 09:50:02] 2025-11-26 14:49:08,675 | INFO     | mean y: 2992270.5739408475
[2025-11-26 09:50:02] 2025-11-26 14:49:08,675 | INFO     | intersect: -8769096969.700531
[2025-11-26 09:50:02] 2025-11-26 14:49:08,676 | INFO     | chi2: 2.9784887819398387
[2025-11-26 09:50:02] 2025-11-26 14:49:08,676 | INFO     | current chi2=2.9784887819398387 (change=41.629645663523334 %)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,678 | INFO     | sum of square deviations: 599869753216.212
[2025-11-26 09:50:02] 2025-11-26 14:49:08,723 | INFO     | sum of deviations: 2944494897126.3325
[2025-11-26 09:50:02] 2025-11-26 14:49:08,723 | INFO     | mean x: 1764130498.4486356
[2025-11-26 09:50:02] 2025-11-26 14:49:08,723 | INFO     | mean y: 2993834.6380417338
[2025-11-26 09:50:02] 2025-11-26 14:49:08,724 | INFO     | intersect: -8656341333.865925
[2025-11-26 09:50:02] 2025-11-26 14:49:08,725 | INFO     | chi2: 2.9524306397407014
[2025-11-26 09:50:02] 2025-11-26 14:49:08,725 | INFO     | current chi2=2.9524306397407014 (change=0.8748779702358338 %)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,725 | INFO     | left removable region: 20
[2025-11-26 09:50:02] 2025-11-26 14:49:08,726 | INFO     | sum of square deviations: 570049560789.8391
[2025-11-26 09:50:02] 2025-11-26 14:49:08,754 | INFO     | sum of deviations: 3201920577742.966
[2025-11-26 09:50:02] 2025-11-26 14:49:08,754 | INFO     | mean x: 1764130467.9885714
[2025-11-26 09:50:02] 2025-11-26 14:49:08,754 | INFO     | mean y: 3004772.1404081634
[2025-11-26 09:50:02] 2025-11-26 14:49:08,754 | INFO     | intersect: -9905968123.91698
[2025-11-26 09:50:02] 2025-11-26 14:49:08,755 | INFO     | chi2: 0.3517195767760732
[2025-11-26 09:50:02] 2025-11-26 14:49:08,755 | INFO     | current memory leak: 5.62 B/s (using 1225 data points, chi2=0.35)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,757 | INFO     | could have reported an average CPU frequency of 3284 MHz (45 samples)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,757 | INFO     | ..............................
[2025-11-26 09:50:02] 2025-11-26 14:49:08,757 | INFO     | . Timing measurements:
[2025-11-26 09:50:02] 2025-11-26 14:49:08,757 | INFO     | . get job = 0 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,757 | INFO     | . initial setup = 3 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | . payload setup = 20 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | . stage-in = 0 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | . payload execution = 76628 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | . stage-out = 7 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | . log creation = 1 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,758 | INFO     | ..............................
[2025-11-26 09:50:02] 2025-11-26 14:49:08,858 | INFO     | time since job start (76709s) is within the limit (172800.0s)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,972 | INFO     | 
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | job summary report
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | --------------------------------------------------
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | PanDA job id: 6895617975
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | task id: 47556161
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | errors: (none)
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:50:02] 2025-11-26 14:49:08,973 | INFO     | pilot state: finished 
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | transexitcode: 0
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | exeerrorcode: 0
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | exeerrordiag: 
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | exitcode: 0
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | exitmsg: OK
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | cpuconsumptiontime: 198422 s
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | nevents: 1000
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | neventsw: 0
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | pid: 2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | pgrp: 2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | corecount: 8
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | event service: False
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | sizes: {0: 2284135, 1: 2284334, 12: 2284334, 14: 2284624, 23: 2284652, 76650: 2345263, 76659: 2354285, 76660: 2354341, 76673: 2354587}
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | --------------------------------------------------
[2025-11-26 09:50:02] 2025-11-26 14:49:08,974 | INFO     | 
[2025-11-26 09:50:02] 2025-11-26 14:49:08,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 09:50:02] 2025-11-26 14:49:09,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | job 6895617975 has completed (purged errors)
[2025-11-26 09:50:02] 2025-11-26 14:49:09,279 | INFO     | overall cleanup function is called
[2025-11-26 09:50:02] 2025-11-26 14:49:10,310 | INFO     | --- collectZombieJob: --- 10, [2880588]
[2025-11-26 09:50:02] 2025-11-26 14:49:10,310 | INFO     | zombie collector waiting for pid 2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:10,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:50:02] 2025-11-26 14:49:10,310 | INFO     | collected zombie processes
[2025-11-26 09:50:02] 2025-11-26 14:49:10,310 | INFO     | will attempt to kill all subprocesses of pid=2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:11,603 | INFO     | process IDs to be killed: [2880588] (in reverse order)
[2025-11-26 09:50:02] 2025-11-26 14:49:11,803 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:50:02] 2025-11-26 14:49:11,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:50:02] 2025-11-26 14:49:11,937 | INFO     | did not find any defunct processes belonging to 2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:11,980 | INFO     | did not find any defunct processes belonging to 2880588
[2025-11-26 09:50:02] 2025-11-26 14:49:11,989 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:50:02] 2025-11-26 14:49:11,990 | INFO     | ready for new job
[2025-11-26 09:50:02] 2025-11-26 14:49:11,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:50:02] 2025-11-26 14:49:12,032 | INFO     | ***************************************
[2025-11-26 09:50:02] 2025-11-26 14:49:12,069 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:50:02] 2025-11-26 14:49:12,069 | INFO     | ***************************************
[2025-11-26 09:50:02] 2025-11-26 14:49:12,069 | INFO     | 
[2025-11-26 09:50:02] 2025-11-26 14:49:12,101 | INFO     | architecture information:
[2025-11-26 09:50:02] 2025-11-26 14:49:12,114 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:50:02] 2025-11-26 14:49:12,316 | INFO     | cat /etc/os-release:
[2025-11-26 09:50:02] NAME="CentOS Linux"
[2025-11-26 09:50:02] VERSION="7 (Core)"
[2025-11-26 09:50:02] ID="centos"
[2025-11-26 09:50:02] ID_LIKE="rhel fedora"
[2025-11-26 09:50:02] VERSION_ID="7"
[2025-11-26 09:50:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:50:02] ANSI_COLOR="0;31"
[2025-11-26 09:50:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:50:02] HOME_URL="https://www.centos.org/"
[2025-11-26 09:50:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:50:02] 
[2025-11-26 09:50:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:50:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:50:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:50:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:50:02] 
[2025-11-26 09:50:02] 2025-11-26 14:49:12,316 | INFO     | ***************************************
[2025-11-26 09:50:02] 2025-11-26 14:49:12,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 09:50:02] 2025-11-26 14:49:12,931 | INFO     | sufficient remaining disk space (90536148992 B)
[2025-11-26 09:50:02] 2025-11-26 14:49:12,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:50:02] 2025-11-26 14:49:12,932 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:50:02] 2025-11-26 14:49:12,932 | INFO     | update_server=False
[2025-11-26 09:50:02] 2025-11-26 14:49:12,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:50:02] 2025-11-26 14:49:13,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:50:02] 2025-11-26 14:49:13,195 | INFO     | aborting loop
[2025-11-26 09:50:02] 2025-11-26 14:49:13,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:50:02] 2025-11-26 14:49:13,503 | INFO     | all payload control threads have been joined
[2025-11-26 09:50:02] 2025-11-26 14:49:13,782 | INFO     | all data control threads have been joined
[2025-11-26 09:50:02] 2025-11-26 14:49:13,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:50:02] 2025-11-26 14:49:13,938 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:13,995 | INFO     | all job control threads have been joined
[2025-11-26 09:50:02] 2025-11-26 14:49:14,203 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,319 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,523 | INFO     | [payload] control thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,593 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,617 | INFO     | [job] validate thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,749 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,788 | INFO     | [data] control thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:14,927 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,001 | INFO     | [job] control thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,242 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,265 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,265 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,406 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:15,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:50:02] 2025-11-26 14:49:19,770 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:50:02] 2025-11-26 14:49:42,734 | INFO     | PID=2873124 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:50:02] 2025-11-26 14:49:42,735 | INFO     | .. there are 34 such processes running
[2025-11-26 09:50:02] 2025-11-26 14:49:42,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:50:02] 2025-11-26 14:49:42,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:50:02] 2025-11-26 14:49:42,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:50:02] 2025-11-26 14:49:55,467 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:50:02] 2025-11-26 14:49:55,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752373102400)>', '<ExcThread(monitor, started 139752028223232)>']
[2025-11-26 09:50:02] 2025-11-26 14:49:55,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:50:02] 2025-11-26 14:49:55,818 | INFO     | [monitor] control thread has ended
[2025-11-26 09:50:02] 2025-11-26 14:50:00,680 | INFO     | all workflow threads have been joined
[2025-11-26 09:50:02] 2025-11-26 14:50:00,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:50:02] 2025-11-26 14:50:00,681 | INFO     | traces error code: 0
[2025-11-26 09:50:02] 2025-11-26 14:50:00,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:50:02] 2025-11-26 14:50:01,392 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:50:02] 2025-11-26 14:50:01,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:50:02] 2025-11-26 14:50:01,510 [wrapper] pilotpid: 2873124
[2025-11-26 09:50:02] 2025-11-26 14:50:01,571 [wrapper] Pilot exit status: 0
[2025-11-26 09:50:02] 2025-11-26 14:50:01,697 [wrapper] pandaids: 6895617975
[2025-11-26 09:50:02] 2025-11-26 14:50:01,837 [wrapper] cleanup supervisor_pilot 3134336 2873125
[2025-11-26 09:50:02] 2025-11-26 14:50:01,844 [wrapper] Test setup, not cleaning
[2025-11-26 09:50:02] 2025-11-26 14:50:01,849 [wrapper] apfmon messages muted
[2025-11-26 09:50:02] 2025-11-26 14:50:01,852 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:50:02] 2025-11-26 14:50:01,857 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:50:02]  *** Error codes and diagnostics ***
[2025-11-26 09:50:02]     "exeErrorCode": 0,
[2025-11-26 09:50:02]     "exeErrorDiag": "",
[2025-11-26 09:50:02]     "pilotErrorCode": 0,
[2025-11-26 09:50:02]     "pilotErrorDiag": "",
[2025-11-26 09:50:02]  *** Listing of results directory ***
[2025-11-26 09:50:02] total 1334220
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 06:25 queuedata.json
[2025-11-26 09:50:02] -rwx------. 1 boincer umatlas     36292 Nov 24 06:27 runpilot2-wrapper.sh
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:50:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:30 run_atlas
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:30 job.xml
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas 410487156 Nov 25 12:30 EVNT.47483658._002039.pool.root.1
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:30 start_atlas.sh
[2025-11-26 09:50:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:30 shared
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas    611276 Nov 25 12:30 input.tar.gz
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:30 boinc_lockfile
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 12:30 pandaJob.out
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas        57 Nov 25 12:30 setup.sh.local
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas    991543 Nov 25 12:30 agis_schedconf.cvmfs.json
[2025-11-26 09:50:02] drwx------. 7 boincer umatlas      4096 Nov 25 12:30 pilot3
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 09:41 boinc_task_state.xml
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas 927761361 Nov 26 09:47 HITS.47556161._000221.pool.root.1
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas      6905 Nov 26 09:48 init_data.xml
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas      1056 Nov 26 09:48 memory_monitor_summary.json
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 09:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas   2305079 Nov 26 09:48 log.47556161._000221.job.log.tgz.1
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas      8585 Nov 26 09:49 heartbeat.json
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas        95 Nov 26 09:49 pilot_heartbeat.json
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas      4824 Nov 26 09:50 pilotlog.txt
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas   9706455 Nov 26 09:50 log.47556161._000221.job.log.1
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 09:50 wrapper_checkpoint.txt
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas       353 Nov 26 09:50 output.list
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 09:50 runtime_log
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas  12032000 Nov 26 09:50 result.tar.gz
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 09:50 runtime_log.err
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas       663 Nov 26 09:50 EkFODmcujh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmReLKDmFGZ3Em.diag
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 09:50 boinc_mmap_file
[2025-11-26 09:50:02] -rw-r--r--. 1 boincer umatlas     21419 Nov 26 09:50 stderr.txt
[2025-11-26 09:50:02] HITS file was successfully produced:
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas 927761361 Nov 26 09:47 shared/HITS.pool.root.1
[2025-11-26 09:50:02]  *** Contents of shared directory: ***
[2025-11-26 09:50:02] total 1319264
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas 410487156 Nov 25 12:30 ATLAS.root_0
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:30 start_atlas.sh
[2025-11-26 09:50:02] -rw-r--r--. 2 boincer umatlas    611276 Nov 25 12:30 input.tar.gz
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas 927761361 Nov 26 09:47 HITS.pool.root.1
[2025-11-26 09:50:02] -rw-------. 1 boincer umatlas  12032000 Nov 26 09:50 result.tar.gz
09:50:03 (2868456): run_atlas exited; CPU time 199334.495026
09:50:03 (2868456): called boinc_finish(0)

</stderr_txt>
]]>

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