Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:57:39 (1818510): wrapper (7.7.26015): starting
05:57:39 (1818510): wrapper: running run_atlas (--nthreads 3)
[2025-11-28 05:57:39] Arguments: --nthreads 3
[2025-11-28 05:57:39] Threads: 3
[2025-11-28 05:57:39] Checking for CVMFS
[2025-11-28 05:57:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 05:57:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 05:57:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 05:57:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 05:57:39] 2.9.2.0 1300652 3594 83980 153397 0 81 29644530 36864000 0 130560 0 1349307 99.979 149182 1804 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 05:57:39] CVMFS is ok
[2025-11-28 05:57:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 05:57:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 05:57:39] Further information can be found at the LHC@home message board.
[2025-11-28 05:57:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 05:57:39] Checking for apptainer binary...
[2025-11-28 05:57:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 05:57:39] Running /usr/bin/apptainer --version
[2025-11-28 05:57:39] apptainer version 1.4.1-1.1
[2025-11-28 05:57:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 05:57:39] thA305
[2025-11-28 05:57:39] apptainer works
[2025-11-28 05:57:39] Set ATHENA_PROC_NUMBER=3
[2025-11-28 05:57:39] Set ATHENA_CORE_NUMBER=3
[2025-11-28 05:57:39] Starting ATLAS job with PandaID=6895618313
[2025-11-28 05:57:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:15:32]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:15:32] 2025-11-28 13:15:01,655 | INFO     | ***************************************
[2025-11-28 14:15:32] 2025-11-28 13:15:01,655 | INFO     | 
[2025-11-28 14:15:32] 2025-11-28 13:15:01,655 | INFO     | architecture information:
[2025-11-28 14:15:32] 2025-11-28 13:15:01,655 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:15:32] 2025-11-28 13:15:01,664 | INFO     | cat /etc/os-release:
[2025-11-28 14:15:32] NAME="CentOS Linux"
[2025-11-28 14:15:32] VERSION="7 (Core)"
[2025-11-28 14:15:32] ID="centos"
[2025-11-28 14:15:32] ID_LIKE="rhel fedora"
[2025-11-28 14:15:32] VERSION_ID="7"
[2025-11-28 14:15:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:15:32] ANSI_COLOR="0;31"
[2025-11-28 14:15:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:15:32] HOME_URL="https://www.centos.org/"
[2025-11-28 14:15:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:15:32] 
[2025-11-28 14:15:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:15:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:15:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:15:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:15:32] 
[2025-11-28 14:15:32] 2025-11-28 13:15:01,664 | INFO     | ***************************************
[2025-11-28 14:15:32] 2025-11-28 13:15:02,167 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 14:15:32] 2025-11-28 13:15:02,180 | INFO     | sufficient remaining disk space (226693742592 B)
[2025-11-28 14:15:32] 2025-11-28 13:15:02,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:15:32] 2025-11-28 13:15:02,180 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:15:32] 2025-11-28 13:15:02,180 | INFO     | update_server=False
[2025-11-28 14:15:32] 2025-11-28 13:15:02,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:15:32] 2025-11-28 13:15:02,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:15:32] 2025-11-28 13:15:02,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:15:32] 2025-11-28 13:15:02,405 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 14:15:32] 2025-11-28 13:15:02,406 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 14:15:32] 2025-11-28 13:15:02,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:15:32] 2025-11-28 13:15:02,406 | INFO     | will abort loop
[2025-11-28 14:15:32] 2025-11-28 13:15:02,903 | INFO     | all data control threads have been joined
[2025-11-28 14:15:32] 2025-11-28 13:15:03,186 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,186 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,278 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,411 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,439 | INFO     | all payload control threads have been joined
[2025-11-28 14:15:32] 2025-11-28 13:15:03,456 | INFO     | all job control threads have been joined
[2025-11-28 14:15:32] 2025-11-28 13:15:03,583 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,596 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,690 | INFO     | [job] validate thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,906 | INFO     | [data] control thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:03,959 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,260 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,394 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,445 | INFO     | [payload] control thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,461 | INFO     | [job] control thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,574 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:04,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:15:32] 2025-11-28 13:15:08,918 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:12,536 | INFO     | job.realtimelogging is not enabled
[2025-11-28 14:15:32] 2025-11-28 13:15:13,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:15:32] 2025-11-28 13:15:23,704 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:15:32] 2025-11-28 13:15:25,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071565956928)>', '<ExcThread(monitor, started 140071063762688)>']
[2025-11-28 14:15:32] 2025-11-28 13:15:30,678 | INFO     | all workflow threads have been joined
[2025-11-28 14:15:32] 2025-11-28 13:15:30,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:15:32] 2025-11-28 13:15:30,679 | INFO     | traces error code: 0
[2025-11-28 14:15:32] 2025-11-28 13:15:30,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | INFO     | PID=1822234 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:15:32] 2025-11-28 13:15:32,245 | INFO     | [monitor] control thread has ended
[2025-11-28 14:15:32] 2025-11-28 13:15:32,292 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:15:32] 2025-11-28 13:15:32,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:15:32] 2025-11-28 13:15:32,297 [wrapper] pilotpid: 1822234
[2025-11-28 14:15:32] 2025-11-28 13:15:32,300 [wrapper] Pilot exit status: 0
[2025-11-28 14:15:32] 2025-11-28 13:15:32,307 [wrapper] pandaids: 6895618313
[2025-11-28 14:15:32] 2025-11-28 13:15:32,323 [wrapper] cleanup supervisor_pilot 1886390 1822235
[2025-11-28 14:15:32] 2025-11-28 13:15:32,326 [wrapper] Test setup, not cleaning
[2025-11-28 14:15:32] 2025-11-28 13:15:32,328 [wrapper] apfmon messages muted
[2025-11-28 14:15:32] 2025-11-28 13:15:32,330 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:15:32] 2025-11-28 13:15:32,333 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:15:32]  *** Error codes and diagnostics ***
[2025-11-28 14:15:32]     "exeErrorCode": 0,
[2025-11-28 14:15:32]     "exeErrorDiag": "",
[2025-11-28 14:15:32]     "pilotErrorCode": 0,
[2025-11-28 14:15:32]     "pilotErrorDiag": "",
[2025-11-28 14:15:32]  *** Listing of results directory ***
[2025-11-28 14:15:32] total 1317064
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc    576529 Nov 24 12:12 pilot3.tar.gz
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      5112 Nov 24 12:31 queuedata.json
[2025-11-28 14:15:32] -rwx------ 1 boinc boinc     36292 Nov 24 12:34 runpilot2-wrapper.sh
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc       100 Nov 28 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:15:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 05:57 run_atlas
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc       105 Nov 28 05:57 job.xml
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc 412049234 Nov 28 05:57 EVNT.47483658._001329.pool.root.1
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc    590104 Nov 28 05:57 input.tar.gz
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc     15847 Nov 28 05:57 start_atlas.sh
[2025-11-28 14:15:32] drwxrwx--x 2 boinc boinc      4096 Nov 28 05:57 shared
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc         0 Nov 28 05:57 boinc_setup_complete
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      6440 Nov 28 05:57 init_data.xml
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc         0 Nov 28 05:57 boinc_lockfile
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      2782 Nov 28 05:57 pandaJob.out
[2025-11-28 14:15:32] -rw------- 1 boinc boinc    991858 Nov 28 05:57 agis_schedconf.cvmfs.json
[2025-11-28 14:15:32] drwx------ 5 boinc boinc      4096 Nov 28 05:57 pilot3
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc       531 Nov 28 14:10 boinc_task_state.xml
[2025-11-28 14:15:32] -rw------- 1 boinc boinc 921955700 Nov 28 14:14 HITS.47556149._003151.pool.root.1
[2025-11-28 14:15:32] -rw------- 1 boinc boinc      1029 Nov 28 14:14 memory_monitor_summary.json
[2025-11-28 14:15:32] -rw------- 1 boinc boinc   1516240 Nov 28 14:14 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:15:32] -rw------- 1 boinc boinc   1182893 Nov 28 14:14 log.47556149._003151.job.log.tgz.1
[2025-11-28 14:15:32] -rw------- 1 boinc boinc      8561 Nov 28 14:15 heartbeat.json
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      8192 Nov 28 14:15 boinc_mmap_file
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc        28 Nov 28 14:15 wrapper_checkpoint.txt
[2025-11-28 14:15:32] -rw------- 1 boinc boinc       747 Nov 28 14:15 pilotlog.txt
[2025-11-28 14:15:32] -rw------- 1 boinc boinc        95 Nov 28 14:15 pilot_heartbeat.json
[2025-11-28 14:15:32] -rw------- 1 boinc boinc   4203722 Nov 28 14:15 log.47556149._003151.job.log.1
[2025-11-28 14:15:32] -rw------- 1 boinc boinc       353 Nov 28 14:15 output.list
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc       620 Nov 28 14:15 runtime_log
[2025-11-28 14:15:32] -rw------- 1 boinc boinc   5406720 Nov 28 14:15 result.tar.gz
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      8898 Nov 28 14:15 runtime_log.err
[2025-11-28 14:15:32] -rw------- 1 boinc boinc       665 Nov 28 14:15 9BlMDmn0jh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmeLKDm4jjudm.diag
[2025-11-28 14:15:32] -rw-r--r-- 1 boinc boinc      9453 Nov 28 14:15 stderr.txt
[2025-11-28 14:15:32] HITS file was successfully produced:
[2025-11-28 14:15:32] -rw------- 1 boinc boinc 921955700 Nov 28 14:14 shared/HITS.pool.root.1
[2025-11-28 14:15:32]  *** Contents of shared directory: ***
[2025-11-28 14:15:32] total 1308620
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc 412049234 Nov 28 05:57 ATLAS.root_0
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc    590104 Nov 28 05:57 input.tar.gz
[2025-11-28 14:15:32] -rw-r--r-- 2 boinc boinc     15847 Nov 28 05:57 start_atlas.sh
[2025-11-28 14:15:32] -rw------- 1 boinc boinc 921955700 Nov 28 14:14 HITS.pool.root.1
[2025-11-28 14:15:32] -rw------- 1 boinc boinc   5406720 Nov 28 14:15 result.tar.gz
14:15:34 (1818510): run_atlas exited; CPU time 88106.589787
14:15:34 (1818510): called boinc_finish(0)

</stderr_txt>
]]>

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