Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:27 (3228161): wrapper (7.7.26015): starting
06:04:27 (3228161): wrapper: running run_atlas (--nthreads 6)
[2025-11-26 06:04:27] Arguments: --nthreads 6
[2025-11-26 06:04:27] Threads: 6
[2025-11-26 06:04:27] Checking for CVMFS
[2025-11-26 06:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:04:28] 2.13.3.0 3071455 429 62236 153297 3 81 43369504 52428801 202 130560 0 571321 99.990 24000 22 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 06:04:28] CVMFS is ok
[2025-11-26 06:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:04:28] Checking for apptainer binary...
[2025-11-26 06:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:04:28] Running /usr/bin/apptainer --version
[2025-11-26 06:04:28] apptainer version 1.4.4-1.el9
[2025-11-26 06:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:04:28] testio008
[2025-11-26 06:04:28] apptainer works
[2025-11-26 06:04:28] Set ATHENA_PROC_NUMBER=6
[2025-11-26 06:04:28] Set ATHENA_CORE_NUMBER=6
[2025-11-26 06:04:28] Starting ATLAS job with PandaID=6895617902
[2025-11-26 06:04:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:22:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:22:26] 2025-11-26 04:21:46,221 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:22:26] 2025-11-26 04:21:46,222 | INFO     | sum of square deviations: 24653518117.044178
[2025-11-26 13:22:26] 2025-11-26 04:21:46,226 | INFO     | sum of deviations: 399571359145.6677
[2025-11-26 13:22:26] 2025-11-26 04:21:46,226 | INFO     | mean x: 1764117777.5325582
[2025-11-26 13:22:26] 2025-11-26 04:21:46,226 | INFO     | mean y: 2637311.2023255816
[2025-11-26 13:22:26] 2025-11-26 04:21:46,226 | INFO     | intersect: -28589263232.776974
[2025-11-26 13:22:26] 2025-11-26 04:21:46,226 | INFO     | chi2: 7.9922031806176825
[2025-11-26 13:22:26] 2025-11-26 04:21:46,227 | INFO     | sum of square deviations: 23803469239.5388
[2025-11-26 13:22:26] 2025-11-26 04:21:46,231 | INFO     | sum of deviations: 517436724535.8354
[2025-11-26 13:22:26] 2025-11-26 04:21:46,231 | INFO     | mean x: 1764117625.032941
[2025-11-26 13:22:26] 2025-11-26 04:21:46,231 | INFO     | mean y: 2658464.011764706
[2025-11-26 13:22:26] 2025-11-26 04:21:46,231 | INFO     | intersect: -38345501478.85664
[2025-11-26 13:22:26] 2025-11-26 04:21:46,232 | INFO     | chi2: 5.414496488548029
[2025-11-26 13:22:26] 2025-11-26 04:21:46,232 | INFO     | current chi2=5.414496488548029 (change=32.25276727599953 %)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,232 | INFO     | sum of square deviations: 22973188174.533325
[2025-11-26 13:22:26] 2025-11-26 04:21:46,236 | INFO     | sum of deviations: 548064693707.73346
[2025-11-26 13:22:26] 2025-11-26 04:21:46,236 | INFO     | mean x: 1764117472.5333333
[2025-11-26 13:22:26] 2025-11-26 04:21:46,236 | INFO     | mean y: 2664029.0547619048
[2025-11-26 13:22:26] 2025-11-26 04:21:46,236 | INFO     | intersect: -42083375353.160095
[2025-11-26 13:22:26] 2025-11-26 04:21:46,237 | INFO     | chi2: 4.666142713507497
[2025-11-26 13:22:26] 2025-11-26 04:21:46,237 | INFO     | current chi2=4.666142713507497 (change=13.82129948044741 %)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,237 | INFO     | right removable region: 419
[2025-11-26 13:22:26] 2025-11-26 04:21:46,237 | INFO     | sum of square deviations: 23803460699.538795
[2025-11-26 13:22:26] 2025-11-26 04:21:46,241 | INFO     | sum of deviations: 267056223343.05634
[2025-11-26 13:22:26] 2025-11-26 04:21:46,241 | INFO     | mean x: 1764117930.032941
[2025-11-26 13:22:26] 2025-11-26 04:21:46,242 | INFO     | mean y: 2661066.1388235292
[2025-11-26 13:22:26] 2025-11-26 04:21:46,242 | INFO     | intersect: -19789363206.008102
[2025-11-26 13:22:26] 2025-11-26 04:21:46,242 | INFO     | chi2: 5.046141693613958
[2025-11-26 13:22:26] 2025-11-26 04:21:46,242 | INFO     | current chi2=5.046141693613958 (change=36.86169408390887 %)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,243 | INFO     | sum of square deviations: 22973171094.533325
[2025-11-26 13:22:26] 2025-11-26 04:21:46,246 | INFO     | sum of deviations: 174393585427.0668
[2025-11-26 13:22:26] 2025-11-26 04:21:46,247 | INFO     | mean x: 1764118082.5333333
[2025-11-26 13:22:26] 2025-11-26 04:21:46,247 | INFO     | mean y: 2678054.495238095
[2025-11-26 13:22:26] 2025-11-26 04:21:46,247 | INFO     | intersect: -13389068181.309296
[2025-11-26 13:22:26] 2025-11-26 04:21:46,247 | INFO     | chi2: 3.5892167746597385
[2025-11-26 13:22:26] 2025-11-26 04:21:46,247 | INFO     | current chi2=3.5892167746597385 (change=28.872057255110395 %)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,248 | INFO     | sum of square deviations: 22162416739.527683
[2025-11-26 13:22:26] 2025-11-26 04:21:46,251 | INFO     | sum of deviations: 149198269018.2097
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | mean x: 1764118235.033735
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | mean y: 2682790.342168675
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | intersect: -11873431177.908287
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | chi2: 3.5357030457388614
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | current chi2=3.5357030457388614 (change=1.4909583979070278 %)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,252 | INFO     | left removable region: 30
[2025-11-26 13:22:26] 2025-11-26 04:21:46,253 | INFO     | sum of square deviations: 18252423733.496094
[2025-11-26 13:22:26] 2025-11-26 04:21:46,256 | INFO     | sum of deviations: 238938386276.31088
[2025-11-26 13:22:26] 2025-11-26 04:21:46,256 | INFO     | mean x: 1764118357.0359898
[2025-11-26 13:22:26] 2025-11-26 04:21:46,256 | INFO     | mean y: 2723384.7634961437
[2025-11-26 13:22:26] 2025-11-26 04:21:46,256 | INFO     | intersect: -23090954451.405094
[2025-11-26 13:22:26] 2025-11-26 04:21:46,257 | INFO     | chi2: 0.11007760389132937
[2025-11-26 13:22:26] 2025-11-26 04:21:46,257 | INFO     | current memory leak: 13.09 B/s (using 389 data points, chi2=0.11)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,257 | INFO     | could have reported an average CPU frequency of 3240 MHz (17 samples)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,257 | INFO     | ..............................
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . Timing measurements:
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . get job = 0 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . initial setup = 5 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . payload setup = 2 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . stage-in = 0 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . payload execution = 26202 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . stage-out = 4 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | . log creation = 0 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,258 | INFO     | ..............................
[2025-11-26 13:22:26] 2025-11-26 04:21:46,334 | INFO     | time since job start (26230s) is within the limit (172800.0s)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | 
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | job summary report
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | --------------------------------------------------
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | PanDA job id: 6895617902
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | task id: 47556149
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | errors: (none)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | pilot state: finished 
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | transexitcode: 0
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | exeerrorcode: 0
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | exeerrordiag: 
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | exitcode: 0
[2025-11-26 13:22:26] 2025-11-26 04:21:46,365 | INFO     | exitmsg: OK
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | cpuconsumptiontime: 149771 s
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | nevents: 1000
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | neventsw: 0
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | pid: 3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | pgrp: 3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | corecount: 6
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | event service: False
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 26209: 2321557, 26214: 2330551, 26215: 2330607, 26218: 2331045}
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | --------------------------------------------------
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | 
[2025-11-26 13:22:26] 2025-11-26 04:21:46,366 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | job 6895617902 has completed (purged errors)
[2025-11-26 13:22:26] 2025-11-26 04:21:46,382 | INFO     | overall cleanup function is called
[2025-11-26 13:22:26] 2025-11-26 04:21:47,395 | INFO     | --- collectZombieJob: --- 10, [3246818]
[2025-11-26 13:22:26] 2025-11-26 04:21:47,395 | INFO     | zombie collector waiting for pid 3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:47,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:22:26] 2025-11-26 04:21:47,395 | INFO     | collected zombie processes
[2025-11-26 13:22:26] 2025-11-26 04:21:47,395 | INFO     | will attempt to kill all subprocesses of pid=3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:47,453 | INFO     | process IDs to be killed: [3246818] (in reverse order)
[2025-11-26 13:22:26] 2025-11-26 04:21:47,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:22:26] 2025-11-26 04:21:47,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:22:26] 2025-11-26 04:21:47,487 | INFO     | did not find any defunct processes belonging to 3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:47,490 | INFO     | did not find any defunct processes belonging to 3246818
[2025-11-26 13:22:26] 2025-11-26 04:21:47,491 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:22:26] 2025-11-26 04:21:47,491 | INFO     | ready for new job
[2025-11-26 13:22:26] 2025-11-26 04:21:47,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:22:26] 2025-11-26 04:21:47,493 | INFO     | ***************************************
[2025-11-26 13:22:26] 2025-11-26 04:21:47,493 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:22:26] 2025-11-26 04:21:47,493 | INFO     | ***************************************
[2025-11-26 13:22:26] 2025-11-26 04:21:47,493 | INFO     | 
[2025-11-26 13:22:26] 2025-11-26 04:21:47,494 | INFO     | architecture information:
[2025-11-26 13:22:26] 2025-11-26 04:21:47,495 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:22:26] 2025-11-26 04:21:47,505 | INFO     | cat /etc/os-release:
[2025-11-26 13:22:26] NAME="CentOS Linux"
[2025-11-26 13:22:26] VERSION="7 (Core)"
[2025-11-26 13:22:26] ID="centos"
[2025-11-26 13:22:26] ID_LIKE="rhel fedora"
[2025-11-26 13:22:26] VERSION_ID="7"
[2025-11-26 13:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:22:26] ANSI_COLOR="0;31"
[2025-11-26 13:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:22:26] HOME_URL="https://www.centos.org/"
[2025-11-26 13:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:22:26] 
[2025-11-26 13:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:22:26] 
[2025-11-26 13:22:26] 2025-11-26 04:21:47,506 | INFO     | ***************************************
[2025-11-26 13:22:26] 2025-11-26 04:21:48,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 13:22:26] 2025-11-26 04:21:48,019 | INFO     | sufficient remaining disk space (291153903616 B)
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | INFO     | update_server=False
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:22:26] 2025-11-26 04:21:48,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 13:22:26] 2025-11-26 04:21:48,021 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:22:26] 2025-11-26 04:21:48,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:22:26] 2025-11-26 04:21:48,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:22:26] 2025-11-26 04:21:48,095 | INFO     | all job control threads have been joined
[2025-11-26 13:22:26] 2025-11-26 04:21:48,207 | INFO     | all payload control threads have been joined
[2025-11-26 13:22:26] 2025-11-26 04:21:48,231 | INFO     | all data control threads have been joined
[2025-11-26 13:22:26] 2025-11-26 04:21:48,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:22:26] 2025-11-26 04:21:48,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 13:22:26] 2025-11-26 04:21:48,479 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 13:22:26] 2025-11-26 04:21:48,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:22:26] 2025-11-26 04:21:48,479 | INFO     | will abort loop
[2025-11-26 13:22:26] 2025-11-26 04:21:49,021 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,026 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,100 | INFO     | [job] control thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,211 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,212 | INFO     | [payload] control thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,236 | INFO     | [data] control thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,253 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,415 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,484 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,929 | INFO     | [job] validate thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:49,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:22:26] 2025-11-26 04:21:50,164 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:50,197 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:50,364 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:50,480 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:21:53,952 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:22:26] 2025-11-26 04:22:20,160 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:22:26] 2025-11-26 04:22:21,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049009833792)>', '<ExcThread(monitor, started 140048506791680)>']
[2025-11-26 13:22:26] 2025-11-26 04:22:22,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:22:26] 2025-11-26 04:22:22,191 | INFO     | [monitor] control thread has ended
[2025-11-26 13:22:26] 2025-11-26 04:22:26,608 | INFO     | all workflow threads have been joined
[2025-11-26 13:22:26] 2025-11-26 04:22:26,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:22:26] 2025-11-26 04:22:26,609 | INFO     | traces error code: 0
[2025-11-26 13:22:26] 2025-11-26 04:22:26,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:22:26] 2025-11-26 04:22:26,697 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:22:26] 2025-11-26 04:22:26,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:22:26] 2025-11-26 04:22:26,700 [wrapper] pilotpid: 3232018
[2025-11-26 13:22:26] 2025-11-26 04:22:26,701 [wrapper] Pilot exit status: 0
[2025-11-26 13:22:26] 2025-11-26 04:22:26,705 [wrapper] pandaids: 6895617902
[2025-11-26 13:22:26] 2025-11-26 04:22:26,716 [wrapper] cleanup supervisor_pilot 3382446 3232019
[2025-11-26 13:22:26] 2025-11-26 04:22:26,718 [wrapper] Test setup, not cleaning
[2025-11-26 13:22:26] 2025-11-26 04:22:26,719 [wrapper] apfmon messages muted
[2025-11-26 13:22:26] 2025-11-26 04:22:26,721 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:22:26] 2025-11-26 04:22:26,722 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:22:26]  *** Error codes and diagnostics ***
[2025-11-26 13:22:26]     "exeErrorCode": 0,
[2025-11-26 13:22:26]     "exeErrorDiag": "",
[2025-11-26 13:22:26]     "pilotErrorCode": 0,
[2025-11-26 13:22:26]     "pilotErrorDiag": "",
[2025-11-26 13:22:26]  *** Listing of results directory ***
[2025-11-26 13:22:26] total 1320036
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc    576529 Nov 24 20:12 pilot3.tar.gz
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc      5112 Nov 24 20:15 queuedata.json
[2025-11-26 13:22:26] -rwx------. 1 boinc boinc     36292 Nov 24 20:20 runpilot2-wrapper.sh
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc       100 Nov 26 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:22:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 06:04 run_atlas
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc       105 Nov 26 06:04 job.xml
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc 410217411 Nov 26 06:04 EVNT.47483658._001323.pool.root.1
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 26 06:04 start_atlas.sh
[2025-11-26 13:22:26] drwxrwx--x. 2 boinc boinc        68 Nov 26 06:04 shared
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc    590101 Nov 26 06:04 input.tar.gz
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc         0 Nov 26 06:04 boinc_lockfile
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc      2786 Nov 26 06:04 pandaJob.out
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc    991893 Nov 26 06:04 agis_schedconf.cvmfs.json
[2025-11-26 13:22:26] drwx------. 5 boinc boinc      4096 Nov 26 06:04 pilot3
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc      9522 Nov 26 07:05 init_data.xml
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc       533 Nov 26 13:14 boinc_task_state.xml
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc        95 Nov 26 13:20 pilot_heartbeat.json
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc 927232816 Nov 26 13:21 HITS.47556149._003100.pool.root.1
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc      1035 Nov 26 13:21 memory_monitor_summary.json
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc   1516240 Nov 26 13:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc   1485625 Nov 26 13:21 log.47556149._003100.job.log.tgz.1
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc      8590 Nov 26 13:21 heartbeat.json
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc        29 Nov 26 13:22 wrapper_checkpoint.txt
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc      8192 Nov 26 13:22 boinc_mmap_file
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc      4739 Nov 26 13:22 pilotlog.txt
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc   3691543 Nov 26 13:22 log.47556149._003100.job.log.1
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc       353 Nov 26 13:22 output.list
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc       620 Nov 26 13:22 runtime_log
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc   5201920 Nov 26 13:22 result.tar.gz
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc      8776 Nov 26 13:22 runtime_log.err
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc       650 Nov 26 13:22 cSzKDmenjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI2IKDmbZjXem.diag
[2025-11-26 13:22:26] -rw-r--r--. 1 boinc boinc     20770 Nov 26 13:22 stderr.txt
[2025-11-26 13:22:26] HITS file was successfully produced:
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc 927232816 Nov 26 13:21 shared/HITS.pool.root.1
[2025-11-26 13:22:26]  *** Contents of shared directory: ***
[2025-11-26 13:22:26] total 1311784
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc 410217411 Nov 26 06:04 ATLAS.root_0
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc     15847 Nov 26 06:04 start_atlas.sh
[2025-11-26 13:22:26] -rw-r--r--. 2 boinc boinc    590101 Nov 26 06:04 input.tar.gz
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc 927232816 Nov 26 13:21 HITS.pool.root.1
[2025-11-26 13:22:26] -rw-------. 1 boinc boinc   5201920 Nov 26 13:22 result.tar.gz
13:22:28 (3228161): run_atlas exited; CPU time 149830.222291
13:22:28 (3228161): called boinc_finish(0)

</stderr_txt>
]]>

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