Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:39:05 (3087770): wrapper (7.7.26015): starting
01:39:05 (3087770): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 01:39:05] Arguments: --nthreads 4
[2025-11-28 01:39:05] Threads: 4
[2025-11-28 01:39:05] Checking for CVMFS
[2025-11-28 01:39:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 01:39:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 01:39:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 01:39:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 01:39:05] 2.9.2.0 1145218 13342 89664 153391 3 81 31967170 36864000 0 130560 0 5371484 99.945 652180 4348 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 01:39:05] CVMFS is ok
[2025-11-28 01:39:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 01:39:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 01:39:05] Further information can be found at the LHC@home message board.
[2025-11-28 01:39:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 01:39:05] Checking for apptainer binary...
[2025-11-28 01:39:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 01:39:05] Running /usr/bin/apptainer --version
[2025-11-28 01:39:05] apptainer version 1.4.1-1.1
[2025-11-28 01:39:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 01:39:05] thA315a
[2025-11-28 01:39:05] apptainer works
[2025-11-28 01:39:05] Set ATHENA_PROC_NUMBER=4
[2025-11-28 01:39:05] Set ATHENA_CORE_NUMBER=4
[2025-11-28 01:39:05] Starting ATLAS job with PandaID=6895359050
[2025-11-28 01:39:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:22:52]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:22:52] 2025-11-28 07:21:51,848 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:22:52] 2025-11-28 07:21:51,848 | INFO     | ***************************************
[2025-11-28 08:22:52] 2025-11-28 07:21:51,848 | INFO     | 
[2025-11-28 08:22:52] 2025-11-28 07:21:51,849 | INFO     | architecture information:
[2025-11-28 08:22:52] 2025-11-28 07:21:51,849 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:22:52] 2025-11-28 07:21:51,862 | INFO     | cat /etc/os-release:
[2025-11-28 08:22:52] NAME="CentOS Linux"
[2025-11-28 08:22:52] VERSION="7 (Core)"
[2025-11-28 08:22:52] ID="centos"
[2025-11-28 08:22:52] ID_LIKE="rhel fedora"
[2025-11-28 08:22:52] VERSION_ID="7"
[2025-11-28 08:22:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:22:52] ANSI_COLOR="0;31"
[2025-11-28 08:22:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:22:52] HOME_URL="https://www.centos.org/"
[2025-11-28 08:22:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:22:52] 
[2025-11-28 08:22:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:22:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:22:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:22:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:22:52] 
[2025-11-28 08:22:52] 2025-11-28 07:21:51,862 | INFO     | ***************************************
[2025-11-28 08:22:52] 2025-11-28 07:21:52,366 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | INFO     | sufficient remaining disk space (223954862080 B)
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | INFO     | update_server=False
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | INFO     | aborting loop
[2025-11-28 08:22:52] 2025-11-28 07:21:52,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:22:52] 2025-11-28 07:21:52,429 | INFO     | all job control threads have been joined
[2025-11-28 08:22:52] 2025-11-28 07:21:53,190 | INFO     | all payload control threads have been joined
[2025-11-28 08:22:52] 2025-11-28 07:21:53,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:22:52] 2025-11-28 07:21:53,307 | INFO     | all data control threads have been joined
[2025-11-28 08:22:52] 2025-11-28 07:21:53,390 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:53,390 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:53,390 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:53,435 | INFO     | [job] control thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:53,808 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,172 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,196 | INFO     | [payload] control thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,271 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,271 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,313 | INFO     | [data] control thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,392 | INFO     | [job] validate thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,567 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:54,865 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:55,222 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:21:55,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:22:52] 2025-11-28 07:21:59,789 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:22:02,431 | INFO     | job.realtimelogging is not enabled
[2025-11-28 08:22:52] 2025-11-28 07:22:03,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:22:52] 2025-11-28 07:22:23,229 | INFO     | PID=3091573 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:22:52] 2025-11-28 07:22:23,229 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:22:52] 2025-11-28 07:22:23,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:22:52] 2025-11-28 07:22:23,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:22:52] 2025-11-28 07:22:46,116 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:22:52] 2025-11-28 07:22:47,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228364560192)>', '<ExcThread(monitor, started 140227486131968)>']
[2025-11-28 08:22:52] 2025-11-28 07:22:47,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:22:52] 2025-11-28 07:22:47,357 | INFO     | [monitor] control thread has ended
[2025-11-28 08:22:52] 2025-11-28 07:22:52,094 | INFO     | all workflow threads have been joined
[2025-11-28 08:22:52] 2025-11-28 07:22:52,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:22:52] 2025-11-28 07:22:52,095 | INFO     | traces error code: 0
[2025-11-28 08:22:52] 2025-11-28 07:22:52,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:22:52] 2025-11-28 07:22:52,162 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:22:52] 2025-11-28 07:22:52,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:22:52] 2025-11-28 07:22:52,171 [wrapper] pilotpid: 3091573
[2025-11-28 08:22:52] 2025-11-28 07:22:52,174 [wrapper] Pilot exit status: 0
[2025-11-28 08:22:52] 2025-11-28 07:22:52,184 [wrapper] pandaids: 6895359050
[2025-11-28 08:22:52] 2025-11-28 07:22:52,207 [wrapper] cleanup supervisor_pilot 3140340 3091574
[2025-11-28 08:22:52] 2025-11-28 07:22:52,210 [wrapper] Test setup, not cleaning
[2025-11-28 08:22:52] 2025-11-28 07:22:52,214 [wrapper] apfmon messages muted
[2025-11-28 08:22:52] 2025-11-28 07:22:52,218 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:22:52] 2025-11-28 07:22:52,221 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:22:52]  *** Error codes and diagnostics ***
[2025-11-28 08:22:52]     "exeErrorCode": 0,
[2025-11-28 08:22:52]     "exeErrorDiag": "",
[2025-11-28 08:22:52]     "pilotErrorCode": 0,
[2025-11-28 08:22:52]     "pilotErrorDiag": "",
[2025-11-28 08:22:52]  *** Listing of results directory ***
[2025-11-28 08:22:52] total 1307088
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc    576529 Nov 23 14:09 pilot3.tar.gz
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      5112 Nov 23 14:11 queuedata.json
[2025-11-28 08:22:52] -rwx------ 1 boinc boinc     36292 Nov 23 14:14 runpilot2-wrapper.sh
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc       100 Nov 28 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:22:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 01:39 run_atlas
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc       105 Nov 28 01:39 job.xml
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc 408710039 Nov 28 01:39 EVNT.47483658._000743.pool.root.1
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc    590103 Nov 28 01:39 input.tar.gz
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc     15847 Nov 28 01:39 start_atlas.sh
[2025-11-28 08:22:52] drwxrwx--x 2 boinc boinc      4096 Nov 28 01:39 shared
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc         0 Nov 28 01:39 boinc_setup_complete
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      6372 Nov 28 01:39 init_data.xml
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc         0 Nov 28 01:39 boinc_lockfile
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      2785 Nov 28 01:39 pandaJob.out
[2025-11-28 08:22:52] -rw------- 1 boinc boinc    991826 Nov 28 01:39 agis_schedconf.cvmfs.json
[2025-11-28 08:22:52] drwx------ 5 boinc boinc      4096 Nov 28 01:39 pilot3
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc       532 Nov 28 08:16 boinc_task_state.xml
[2025-11-28 08:22:52] -rw------- 1 boinc boinc 916518314 Nov 28 08:21 HITS.47556137._007383.pool.root.1
[2025-11-28 08:22:52] -rw------- 1 boinc boinc      1029 Nov 28 08:21 memory_monitor_summary.json
[2025-11-28 08:22:52] -rw------- 1 boinc boinc   1516240 Nov 28 08:21 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:22:52] -rw------- 1 boinc boinc   1251168 Nov 28 08:21 log.47556137._007383.job.log.tgz.1
[2025-11-28 08:22:52] -rw------- 1 boinc boinc      8584 Nov 28 08:21 heartbeat.json
[2025-11-28 08:22:52] -rw------- 1 boinc boinc        95 Nov 28 08:22 pilot_heartbeat.json
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      8192 Nov 28 08:22 boinc_mmap_file
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc        28 Nov 28 08:22 wrapper_checkpoint.txt
[2025-11-28 08:22:52] -rw------- 1 boinc boinc      4824 Nov 28 08:22 pilotlog.txt
[2025-11-28 08:22:52] -rw------- 1 boinc boinc   3409033 Nov 28 08:22 log.47556137._007383.job.log.1
[2025-11-28 08:22:52] -rw------- 1 boinc boinc       353 Nov 28 08:22 output.list
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc       620 Nov 28 08:22 runtime_log
[2025-11-28 08:22:52] -rw------- 1 boinc boinc   4679680 Nov 28 08:22 result.tar.gz
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      8903 Nov 28 08:22 runtime_log.err
[2025-11-28 08:22:52] -rw------- 1 boinc boinc       666 Nov 28 08:22 ipCLDml6Oh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRvKKDmC2nqgm.diag
[2025-11-28 08:22:52] -rw-r--r-- 1 boinc boinc      9324 Nov 28 08:22 stderr.txt
[2025-11-28 08:22:52] HITS file was successfully produced:
[2025-11-28 08:22:52] -rw------- 1 boinc boinc 916518314 Nov 28 08:21 shared/HITS.pool.root.1
[2025-11-28 08:22:52]  *** Contents of shared directory: ***
[2025-11-28 08:22:52] total 1299348
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc 408710039 Nov 28 01:39 ATLAS.root_0
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc    590103 Nov 28 01:39 input.tar.gz
[2025-11-28 08:22:52] -rw-r--r-- 2 boinc boinc     15847 Nov 28 01:39 start_atlas.sh
[2025-11-28 08:22:52] -rw------- 1 boinc boinc 916518314 Nov 28 08:21 HITS.pool.root.1
[2025-11-28 08:22:52] -rw------- 1 boinc boinc   4679680 Nov 28 08:22 result.tar.gz
08:22:53 (3087770): run_atlas exited; CPU time 94407.753686
08:22:53 (3087770): called boinc_finish(0)

</stderr_txt>
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