Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:10:44 (77064): wrapper (7.7.26015): starting
11:10:44 (77064): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 11:10:44] Arguments: --nthreads 3
[2025-11-25 11:10:44] Threads: 3
[2025-11-25 11:10:44] Checking for CVMFS
[2025-11-25 11:10:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:10:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:10:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:10:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:10:45] 2.9.2.0 4187037 25 52120 153277 2 88 35140210 36864000 0 130560 0 250447 100.000 4 39 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 11:10:45] CVMFS is ok
[2025-11-25 11:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:10:45] Further information can be found at the LHC@home message board.
[2025-11-25 11:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:10:45] Checking for apptainer binary...
[2025-11-25 11:10:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:10:45] Running /usr/bin/apptainer --version
[2025-11-25 11:10:45] apptainer version 1.4.1-1.1
[2025-11-25 11:10:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:10:45] thA335
[2025-11-25 11:10:45] apptainer works
[2025-11-25 11:10:45] Set ATHENA_PROC_NUMBER=3
[2025-11-25 11:10:45] Set ATHENA_CORE_NUMBER=3
[2025-11-25 11:10:45] Starting ATLAS job with PandaID=6895617828
[2025-11-25 11:10:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:15:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:15:01] 2025-11-25 10:14:20,591 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:20,763 | INFO     | all payload control threads have been joined
[2025-11-25 11:15:01] 2025-11-25 10:14:20,777 | INFO     | all job control threads have been joined
[2025-11-25 11:15:01] 2025-11-25 10:14:20,946 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,252 | INFO     | [data] control thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,693 | INFO     | [job] validate thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,769 | INFO     | [payload] control thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,775 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:21,783 | INFO     | [job] control thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:22,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:15:01] 2025-11-25 10:14:22,576 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:26,376 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:15:01] 2025-11-25 10:14:48,943 | INFO     | PID=80797 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 11:15:01] 2025-11-25 10:14:48,943 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:15:01] 2025-11-25 10:14:48,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:15:01] 2025-11-25 10:14:48,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:15:01] 2025-11-25 10:14:56,004 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:15:01] 2025-11-25 10:14:56,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302962186048)>', '<ExcThread(monitor, started 140302337693440)>']
[2025-11-25 11:15:01] 2025-11-25 10:14:56,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:15:01] 2025-11-25 10:14:56,986 | INFO     | [monitor] control thread has ended
[2025-11-25 11:15:01] 2025-11-25 10:15:01,178 | INFO     | all workflow threads have been joined
[2025-11-25 11:15:01] 2025-11-25 10:15:01,179 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:15:01] 2025-11-25 10:15:01,179 | INFO     | traces error code: 0
[2025-11-25 11:15:01] 2025-11-25 10:15:01,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:15:01] 2025-11-25 10:15:01,230 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:15:01] 2025-11-25 10:15:01,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:15:01] 2025-11-25 10:15:01,237 [wrapper] pilotpid: 80797
[2025-11-25 11:15:01] 2025-11-25 10:15:01,240 [wrapper] Pilot exit status: 0
[2025-11-25 11:15:01] 2025-11-25 10:15:01,247 [wrapper] pandaids: 6895617828
[2025-11-25 11:15:01] 2025-11-25 10:15:01,263 [wrapper] cleanup supervisor_pilot   80803 80798
[2025-11-25 11:15:01] 2025-11-25 10:15:01,265 [wrapper] Test setup, not cleaning
[2025-11-25 11:15:01] 2025-11-25 10:15:01,268 [wrapper] apfmon messages muted
[2025-11-25 11:15:01] 2025-11-25 10:15:01,270 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:15:01] 2025-11-25 10:15:01,273 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:15:01]  *** Error codes and diagnostics ***
[2025-11-25 11:15:01]     "exeErrorCode": 65,
[2025-11-25 11:15:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:15:01]     "pilotErrorCode": 1305,
[2025-11-25 11:15:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:15:01]  *** Listing of results directory ***
[2025-11-25 11:15:01] total 404168
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc    576529 Nov 24 12:12 pilot3.tar.gz
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      5112 Nov 24 12:15 queuedata.json
[2025-11-25 11:15:01] -rwx------ 1 boinc boinc     36292 Nov 24 12:18 runpilot2-wrapper.sh
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc       100 Nov 25 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:15:01] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 11:10 run_atlas
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc       105 Nov 25 11:10 job.xml
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc 409663901 Nov 25 11:10 EVNT.47483658._001321.pool.root.1
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc    590103 Nov 25 11:10 input.tar.gz
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:10 start_atlas.sh
[2025-11-25 11:15:01] drwxrwx--x 2 boinc boinc      4096 Nov 25 11:10 shared
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:10 boinc_setup_complete
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      6196 Nov 25 11:10 init_data.xml
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:10 boinc_lockfile
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      2786 Nov 25 11:10 pandaJob.out
[2025-11-25 11:15:01] -rw------- 1 boinc boinc    991894 Nov 25 11:10 agis_schedconf.cvmfs.json
[2025-11-25 11:15:01] -rw------- 1 boinc boinc   1516240 Nov 25 11:10 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:15:01] drwx------ 5 boinc boinc      4096 Nov 25 11:10 pilot3
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc       524 Nov 25 11:11 boinc_task_state.xml
[2025-11-25 11:15:01] -rw------- 1 boinc boinc       953 Nov 25 11:12 memory_monitor_summary.json
[2025-11-25 11:15:01] -rw------- 1 boinc boinc     54854 Nov 25 11:12 log.47556149._003076.job.log.tgz.1
[2025-11-25 11:15:01] -rw------- 1 boinc boinc        95 Nov 25 11:13 pilot_heartbeat.json
[2025-11-25 11:15:01] -rw------- 1 boinc boinc      8415 Nov 25 11:14 heartbeat.json
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:14 boinc_mmap_file
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc        23 Nov 25 11:14 wrapper_checkpoint.txt
[2025-11-25 11:15:01] -rw------- 1 boinc boinc      4750 Nov 25 11:15 pilotlog.txt
[2025-11-25 11:15:01] -rw------- 1 boinc boinc     94738 Nov 25 11:15 log.47556149._003076.job.log.1
[2025-11-25 11:15:01] -rw------- 1 boinc boinc       186 Nov 25 11:15 output.list
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:15 runtime_log
[2025-11-25 11:15:01] -rw------- 1 boinc boinc    174080 Nov 25 11:15 result.tar.gz
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      8744 Nov 25 11:15 runtime_log.err
[2025-11-25 11:15:01] -rw------- 1 boinc boinc       649 Nov 25 11:15 I5MKDmeljh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXdLKDmcLbwNn.diag
[2025-11-25 11:15:01] -rw-r--r-- 1 boinc boinc      6393 Nov 25 11:15 stderr.txt
[2025-11-25 11:15:01] No HITS result produced
[2025-11-25 11:15:01]  *** Contents of shared directory: ***
[2025-11-25 11:15:01] total 400836
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc 409663901 Nov 25 11:10 ATLAS.root_0
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc    590103 Nov 25 11:10 input.tar.gz
[2025-11-25 11:15:01] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:10 start_atlas.sh
[2025-11-25 11:15:01] -rw------- 1 boinc boinc    174080 Nov 25 11:15 result.tar.gz
11:15:02 (77064): run_atlas exited; CPU time 31.659608
11:15:02 (77064): called boinc_finish(0)

</stderr_txt>
]]>

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