Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:19 (2225): wrapper (7.7.26015): starting
05:11:19 (2225): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:11:19] Arguments: --nthreads 8
[2025-11-25 05:11:19] Threads: 8
[2025-11-25 05:11:19] Checking for CVMFS
[2025-11-25 05:11:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:11:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:11:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:11:20] 2.11.2.0 2830 47287 86196 153278 2 11 15647310 20275200 1 130560 0 8611153 99.720 2958833 27306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 05:11:20] CVMFS is ok
[2025-11-25 05:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:11:20] Further information can be found at the LHC@home message board.
[2025-11-25 05:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:11:20] Checking for apptainer binary...
[2025-11-25 05:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:11:20] Running /usr/bin/apptainer --version
[2025-11-25 05:11:20] apptainer version 1.3.2-1.el7
[2025-11-25 05:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:11:21] c-204-5.aglt2.org
[2025-11-25 05:11:21] apptainer works
[2025-11-25 05:11:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:11:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:11:21] Starting ATLAS job with PandaID=6895559880
[2025-11-25 05:11:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:46:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:46:02] 2025-11-25 22:45:27,005 | INFO     | time since job start (45229s) is within the limit (172800.0s)
[2025-11-25 17:46:02] 2025-11-25 22:45:28,124 | INFO     | monitor loop #3328: job 0:6895559880 is in state 'finished'
[2025-11-25 17:46:02] 2025-11-25 22:45:28,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:46:02] 2025-11-25 22:45:29,010 | INFO     | time since job start (45231s) is within the limit (172800.0s)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,367 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 17:46:02] 2025-11-25 22:45:30,371 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-11-25 17:46:02] 2025-11-25 22:45:30,373 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559880/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,374 | INFO     | extracted standard info from prmon json
[2025-11-25 17:46:02] 2025-11-25 22:45:30,374 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:46:02] 2025-11-25 22:45:30,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:46:02] 2025-11-25 22:45:30,388 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:46:02] 2025-11-25 22:45:30,388 | INFO     | sum of square deviations: 126163160513.2415
[2025-11-25 17:46:02] 2025-11-25 22:45:30,400 | INFO     | sum of deviations: 786807932904.1534
[2025-11-25 17:46:02] 2025-11-25 22:45:30,400 | INFO     | mean x: 1764088100.5735493
[2025-11-25 17:46:02] 2025-11-25 22:45:30,400 | INFO     | mean y: 2954061.4466936574
[2025-11-25 17:46:02] 2025-11-25 22:45:30,401 | INFO     | intersect: -10998660880.875639
[2025-11-25 17:46:02] 2025-11-25 22:45:30,401 | INFO     | chi2: 6.259775707324833
[2025-11-25 17:46:02] 2025-11-25 22:45:30,402 | INFO     | sum of square deviations: 123626572806.58565
[2025-11-25 17:46:02] 2025-11-25 22:45:30,413 | INFO     | sum of deviations: 1017363002481.294
[2025-11-25 17:46:02] 2025-11-25 22:45:30,414 | INFO     | mean x: 1764087948.0774457
[2025-11-25 17:46:02] 2025-11-25 22:45:30,414 | INFO     | mean y: 2967916.836956522
[2025-11-25 17:46:02] 2025-11-25 22:45:30,414 | INFO     | intersect: -14514281657.855854
[2025-11-25 17:46:02] 2025-11-25 22:45:30,415 | INFO     | chi2: 3.59744501052276
[2025-11-25 17:46:02] 2025-11-25 22:45:30,415 | INFO     | current chi2=3.59744501052276 (change=42.53076821405542 %)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,416 | INFO     | sum of square deviations: 121124218299.90685
[2025-11-25 17:46:02] 2025-11-25 22:45:30,427 | INFO     | sum of deviations: 1130409112134.9775
[2025-11-25 17:46:02] 2025-11-25 22:45:30,427 | INFO     | mean x: 1764087795.5813954
[2025-11-25 17:46:02] 2025-11-25 22:45:30,427 | INFO     | mean y: 2974801.7482900135
[2025-11-25 17:46:02] 2025-11-25 22:45:30,428 | INFO     | intersect: -16460627165.892632
[2025-11-25 17:46:02] 2025-11-25 22:45:30,428 | INFO     | chi2: 2.8608946232732637
[2025-11-25 17:46:02] 2025-11-25 22:45:30,429 | INFO     | current chi2=2.8608946232732637 (change=20.474263959422274 %)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,429 | INFO     | right removable region: 730
[2025-11-25 17:46:02] 2025-11-25 22:45:30,430 | INFO     | sum of square deviations: 123626313556.58565
[2025-11-25 17:46:02] 2025-11-25 22:45:30,441 | INFO     | sum of deviations: 573001370277.9971
[2025-11-25 17:46:02] 2025-11-25 22:45:30,441 | INFO     | mean x: 1764088253.0774457
[2025-11-25 17:46:02] 2025-11-25 22:45:30,441 | INFO     | mean y: 2966892.8070652173
[2025-11-25 17:46:02] 2025-11-25 22:45:30,441 | INFO     | intersect: -8173488080.446056
[2025-11-25 17:46:02] 2025-11-25 22:45:30,442 | INFO     | chi2: 3.870082913330009
[2025-11-25 17:46:02] 2025-11-25 22:45:30,442 | INFO     | current chi2=3.870082913330009 (change=38.1753740984448 %)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,443 | INFO     | sum of square deviations: 121123834366.3831
[2025-11-25 17:46:02] 2025-11-25 22:45:30,454 | INFO     | sum of deviations: 513727335790.10266
[2025-11-25 17:46:02] 2025-11-25 22:45:30,455 | INFO     | mean x: 1764088405.5772915
[2025-11-25 17:46:02] 2025-11-25 22:45:30,455 | INFO     | mean y: 2970504.4760601916
[2025-11-25 17:46:02] 2025-11-25 22:45:30,455 | INFO     | intersect: -7479127807.852113
[2025-11-25 17:46:02] 2025-11-25 22:45:30,456 | INFO     | chi2: 3.7694928235866327
[2025-11-25 17:46:02] 2025-11-25 22:45:30,456 | INFO     | current chi2=3.7694928235866327 (change=2.5991714388574585 %)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,456 | INFO     | left removable region: 20
[2025-11-25 17:46:02] 2025-11-25 22:45:30,457 | INFO     | sum of square deviations: 110982180265.40979
[2025-11-25 17:46:02] 2025-11-25 22:45:30,467 | INFO     | sum of deviations: 791758125210.8225
[2025-11-25 17:46:02] 2025-11-25 22:45:30,467 | INFO     | mean x: 1764088375.0887325
[2025-11-25 17:46:02] 2025-11-25 22:45:30,467 | INFO     | mean y: 2997702.0028169015
[2025-11-25 17:46:02] 2025-11-25 22:45:30,468 | INFO     | intersect: -12582187606.36137
[2025-11-25 17:46:02] 2025-11-25 22:45:30,468 | INFO     | chi2: 0.23577089929144585
[2025-11-25 17:46:02] 2025-11-25 22:45:30,468 | INFO     | current memory leak: 7.13 B/s (using 710 data points, chi2=0.24)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,469 | INFO     | could have reported an average CPU frequency of 2179 MHz (28 samples)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,469 | INFO     | ..............................
[2025-11-25 17:46:02] 2025-11-25 22:45:30,469 | INFO     | . Timing measurements:
[2025-11-25 17:46:02] 2025-11-25 22:45:30,469 | INFO     | . get job = 0 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . initial setup = 2 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . payload setup = 8 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . stage-in = 0 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . payload execution = 45189 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . stage-out = 3 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | . log creation = 0 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,470 | INFO     | ..............................
[2025-11-25 17:46:02] 2025-11-25 22:45:30,558 | INFO     | 
[2025-11-25 17:46:02] 2025-11-25 22:45:30,559 | INFO     | job summary report
[2025-11-25 17:46:02] 2025-11-25 22:45:30,559 | INFO     | --------------------------------------------------
[2025-11-25 17:46:02] 2025-11-25 22:45:30,559 | INFO     | PanDA job id: 6895559880
[2025-11-25 17:46:02] 2025-11-25 22:45:30,559 | INFO     | task id: 47556149
[2025-11-25 17:46:02] 2025-11-25 22:45:30,559 | INFO     | errors: (none)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | pilot state: finished 
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | transexitcode: 0
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | exeerrorcode: 0
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | exeerrordiag: 
[2025-11-25 17:46:02] 2025-11-25 22:45:30,560 | INFO     | exitcode: 0
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | exitmsg: OK
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | cpuconsumptiontime: 348902 s
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | nevents: 1000
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | neventsw: 0
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | pid: 12374
[2025-11-25 17:46:02] 2025-11-25 22:45:30,561 | INFO     | pgrp: 12374
[2025-11-25 17:46:02] 2025-11-25 22:45:30,562 | INFO     | corecount: 8
[2025-11-25 17:46:02] 2025-11-25 22:45:30,562 | INFO     | event service: False
[2025-11-25 17:46:02] 2025-11-25 22:45:30,562 | INFO     | sizes: {0: 2284200, 1: 2284342, 6: 2284604, 11: 2284632, 45201: 2330641, 45205: 2339635, 45206: 2339819, 45215: 2340065}
[2025-11-25 17:46:02] 2025-11-25 22:45:30,562 | INFO     | --------------------------------------------------
[2025-11-25 17:46:02] 2025-11-25 22:45:30,562 | INFO     | 
[2025-11-25 17:46:02] 2025-11-25 22:45:30,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 17:46:02] 2025-11-25 22:45:30,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:46:02] 2025-11-25 22:45:30,597 | INFO     | job 6895559880 has completed (purged errors)
[2025-11-25 17:46:02] 2025-11-25 22:45:30,597 | INFO     | overall cleanup function is called
[2025-11-25 17:46:02] 2025-11-25 22:45:31,614 | INFO     | --- collectZombieJob: --- 10, [12374]
[2025-11-25 17:46:02] 2025-11-25 22:45:31,614 | INFO     | zombie collector waiting for pid 12374
[2025-11-25 17:46:02] 2025-11-25 22:45:31,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:46:02] 2025-11-25 22:45:31,615 | INFO     | collected zombie processes
[2025-11-25 17:46:02] 2025-11-25 22:45:31,615 | INFO     | will attempt to kill all subprocesses of pid=12374
[2025-11-25 17:46:02] 2025-11-25 22:45:31,707 | INFO     | process IDs to be killed: [12374] (in reverse order)
[2025-11-25 17:46:02] 2025-11-25 22:45:31,766 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:46:02] 2025-11-25 22:45:31,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:46:02] 2025-11-25 22:45:31,770 | INFO     | did not find any defunct processes belonging to 12374
[2025-11-25 17:46:02] 2025-11-25 22:45:31,773 | INFO     | did not find any defunct processes belonging to 12374
[2025-11-25 17:46:02] 2025-11-25 22:45:31,775 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:46:02] 2025-11-25 22:45:31,776 | INFO     | ready for new job
[2025-11-25 17:46:02] 2025-11-25 22:45:31,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:46:02] 2025-11-25 22:45:31,780 | INFO     | ***************************************
[2025-11-25 17:46:02] 2025-11-25 22:45:31,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:46:02] 2025-11-25 22:45:31,780 | INFO     | ***************************************
[2025-11-25 17:46:02] 2025-11-25 22:45:31,780 | INFO     | 
[2025-11-25 17:46:02] 2025-11-25 22:45:31,781 | INFO     | architecture information:
[2025-11-25 17:46:02] 2025-11-25 22:45:31,782 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:46:02] 2025-11-25 22:45:31,798 | INFO     | cat /etc/os-release:
[2025-11-25 17:46:02] NAME="CentOS Linux"
[2025-11-25 17:46:02] VERSION="7 (Core)"
[2025-11-25 17:46:02] ID="centos"
[2025-11-25 17:46:02] ID_LIKE="rhel fedora"
[2025-11-25 17:46:02] VERSION_ID="7"
[2025-11-25 17:46:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:46:02] ANSI_COLOR="0;31"
[2025-11-25 17:46:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:46:02] HOME_URL="https://www.centos.org/"
[2025-11-25 17:46:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:46:02] 
[2025-11-25 17:46:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:46:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:46:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:46:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:46:02] 
[2025-11-25 17:46:02] 2025-11-25 22:45:31,798 | INFO     | ***************************************
[2025-11-25 17:46:02] 2025-11-25 22:45:32,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 17:46:02] 2025-11-25 22:45:32,321 | INFO     | sufficient remaining disk space (17460887552 B)
[2025-11-25 17:46:02] 2025-11-25 22:45:32,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:46:02] 2025-11-25 22:45:32,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:46:02] 2025-11-25 22:45:32,322 | INFO     | update_server=False
[2025-11-25 17:46:02] 2025-11-25 22:45:32,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:46:02] 2025-11-25 22:45:32,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:46:02] 2025-11-25 22:45:32,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:46:02] 2025-11-25 22:45:32,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:46:02] 2025-11-25 22:45:32,324 | INFO     | aborting loop
[2025-11-25 17:46:02] 2025-11-25 22:45:32,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:46:02] 2025-11-25 22:45:32,835 | INFO     | all data control threads have been joined
[2025-11-25 17:46:02] 2025-11-25 22:45:33,045 | INFO     | all job control threads have been joined
[2025-11-25 17:46:02] 2025-11-25 22:45:33,118 | INFO     | all payload control threads have been joined
[2025-11-25 17:46:02] 2025-11-25 22:45:33,324 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:33,324 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:33,329 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:33,841 | INFO     | [data] control thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:33,906 | INFO     | [job] validate thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,047 | INFO     | [job] control thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,124 | INFO     | [payload] control thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,161 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,218 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,265 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,265 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,328 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,411 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,570 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:34,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:36,791 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:46:02] 2025-11-25 22:45:53,290 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:46:02] 2025-11-25 22:45:54,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345524295488)>', '<ExcThread(monitor, started 140344960214784)>']
[2025-11-25 17:46:02] 2025-11-25 22:45:59,319 | INFO     | all workflow threads have been joined
[2025-11-25 17:46:02] 2025-11-25 22:45:59,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:46:02] 2025-11-25 22:45:59,320 | INFO     | traces error code: 0
[2025-11-25 17:46:02] 2025-11-25 22:45:59,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:46:02] 2025-11-25 22:46:02,227 | INFO     | PID=5941 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 17:46:02] 2025-11-25 22:46:02,227 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:46:02] 2025-11-25 22:46:02,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:46:02] 2025-11-25 22:46:02,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:46:02] 2025-11-25 22:46:02,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:46:02] 2025-11-25 22:46:02,228 | INFO     | [monitor] control thread has ended
[2025-11-25 17:46:02] 2025-11-25 22:46:02,335 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:46:02] 2025-11-25 22:46:02,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:46:02] 2025-11-25 22:46:02,344 [wrapper] pilotpid: 5941
[2025-11-25 17:46:02] 2025-11-25 22:46:02,348 [wrapper] Pilot exit status: 0
[2025-11-25 17:46:02] 2025-11-25 22:46:02,364 [wrapper] pandaids: 6895559880
[2025-11-25 17:46:02] 2025-11-25 22:46:02,410 [wrapper] cleanup supervisor_pilot 28394 5942
[2025-11-25 17:46:02] 2025-11-25 22:46:02,415 [wrapper] Test setup, not cleaning
[2025-11-25 17:46:02] 2025-11-25 22:46:02,419 [wrapper] apfmon messages muted
[2025-11-25 17:46:02] 2025-11-25 22:46:02,424 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:46:02] 2025-11-25 22:46:02,428 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:46:02]  *** Error codes and diagnostics ***
[2025-11-25 17:46:02]     "exeErrorCode": 0,
[2025-11-25 17:46:02]     "exeErrorDiag": "",
[2025-11-25 17:46:02]     "pilotErrorCode": 0,
[2025-11-25 17:46:02]     "pilotErrorDiag": "",
[2025-11-25 17:46:02]  *** Listing of results directory ***
[2025-11-25 17:46:02] total 1321588
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 06:06 queuedata.json
[2025-11-25 17:46:02] -rwx------ 1 boincer umatlas     36292 Nov 24 06:09 runpilot2-wrapper.sh
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas       100 Nov 25 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:46:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 05:11 run_atlas
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas       105 Nov 25 05:11 job.xml
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas 410948673 Nov 25 05:11 EVNT.47483658._001319.pool.root.1
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:11 start_atlas.sh
[2025-11-25 17:46:02] drwxrwx--x 2 boincer umatlas      4096 Nov 25 05:11 shared
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 05:11 input.tar.gz
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas         0 Nov 25 05:11 boinc_lockfile
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 05:11 pandaJob.out
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas        57 Nov 25 05:11 setup.sh.local
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas    991894 Nov 25 05:11 agis_schedconf.cvmfs.json
[2025-11-25 17:46:02] drwx------ 5 boincer umatlas      4096 Nov 25 05:11 pilot3
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas       533 Nov 25 17:29 boinc_task_state.xml
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas      5912 Nov 25 17:37 init_data.xml
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas 921977712 Nov 25 17:44 HITS.47556149._003055.pool.root.1
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas      1064 Nov 25 17:45 memory_monitor_summary.json
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas   1516240 Nov 25 17:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas   1989600 Nov 25 17:45 log.47556149._003055.job.log.tgz.1
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas      8669 Nov 25 17:45 heartbeat.json
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas        29 Nov 25 17:45 wrapper_checkpoint.txt
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 17:45 boinc_mmap_file
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas       744 Nov 25 17:46 pilotlog.txt
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas        95 Nov 25 17:46 pilot_heartbeat.json
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas   6241672 Nov 25 17:46 log.47556149._003055.job.log.1
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas       353 Nov 25 17:46 output.list
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas       620 Nov 25 17:46 runtime_log
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas   8253440 Nov 25 17:46 result.tar.gz
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas       667 Nov 25 17:46 wLuLDmecjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDdLKDmR4E8dn.diag
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 17:46 runtime_log.err
[2025-11-25 17:46:02] -rw-r--r-- 1 boincer umatlas     21309 Nov 25 17:46 stderr.txt
[2025-11-25 17:46:02] HITS file was successfully produced:
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas 921977712 Nov 25 17:44 shared/HITS.pool.root.1
[2025-11-25 17:46:02]  *** Contents of shared directory: ***
[2025-11-25 17:46:02] total 1310352
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas 410948673 Nov 25 05:11 ATLAS.root_0
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:11 start_atlas.sh
[2025-11-25 17:46:02] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 05:11 input.tar.gz
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas 921977712 Nov 25 17:44 HITS.pool.root.1
[2025-11-25 17:46:02] -rw------- 1 boincer umatlas   8253440 Nov 25 17:46 result.tar.gz
17:46:04 (2225): run_atlas exited; CPU time 345417.220429
17:46:04 (2225): called boinc_finish(0)

</stderr_txt>
]]>

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