Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:17 (10346): wrapper (7.7.26015): starting
05:01:17 (10346): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:01:17] Arguments: --nthreads 8
[2025-11-25 05:01:17] Threads: 8
[2025-11-25 05:01:17] Checking for CVMFS
[2025-11-25 05:01:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:01:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:01:17] 2.11.2.0 4697 116078 134528 153277 0 82 15969805 18432000 1885 130560 0 82833720 99.974 4935215 32172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 05:01:17] CVMFS is ok
[2025-11-25 05:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:01:17] Further information can be found at the LHC@home message board.
[2025-11-25 05:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:01:17] Checking for apptainer binary...
[2025-11-25 05:01:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:01:17] Running /usr/bin/apptainer --version
[2025-11-25 05:01:17] apptainer version 1.3.2-1.el7
[2025-11-25 05:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:01:18] c-206-21.aglt2.org
[2025-11-25 05:01:18] apptainer works
[2025-11-25 05:01:18] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:01:18] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:01:18] Starting ATLAS job with PandaID=6895375021
[2025-11-25 05:01:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:38:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:38:33] 2025-11-26 05:37:29,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:38:33] 2025-11-26 05:37:29,739 | INFO     | time since job start (70559s) is within the limit (172800.0s)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,114 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 00:38:33] 2025-11-26 05:37:30,119 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2106.2916666666665
[2025-11-26 00:38:33] 2025-11-26 05:37:30,123 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895375021/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,123 | INFO     | extracted standard info from prmon json
[2025-11-26 00:38:33] 2025-11-26 05:37:30,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:38:33] 2025-11-26 05:37:30,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:38:33] 2025-11-26 05:37:30,140 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:38:33] 2025-11-26 05:37:30,141 | INFO     | sum of square deviations: 480261193794.19
[2025-11-26 00:38:33] 2025-11-26 05:37:30,167 | INFO     | sum of deviations: 2305605268016.1616
[2025-11-26 00:38:33] 2025-11-26 05:37:30,167 | INFO     | mean x: 1764100175.628349
[2025-11-26 00:38:33] 2025-11-26 05:37:30,167 | INFO     | mean y: 2861919.0561797754
[2025-11-26 00:38:33] 2025-11-26 05:37:30,167 | INFO     | intersect: -8466110196.104881
[2025-11-26 00:38:33] 2025-11-26 05:37:30,168 | INFO     | chi2: 6.007360853850194
[2025-11-26 00:38:33] 2025-11-26 05:37:30,169 | INFO     | sum of square deviations: 474061894637.20703
[2025-11-26 00:38:33] 2025-11-26 05:37:30,203 | INFO     | sum of deviations: 2681336756171.425
[2025-11-26 00:38:33] 2025-11-26 05:37:30,203 | INFO     | mean x: 1764100023.1310763
[2025-11-26 00:38:33] 2025-11-26 05:37:30,203 | INFO     | mean y: 2871158.189236111
[2025-11-26 00:38:33] 2025-11-26 05:37:30,203 | INFO     | intersect: -9975037395.72255
[2025-11-26 00:38:33] 2025-11-26 05:37:30,204 | INFO     | chi2: 2.901200400265191
[2025-11-26 00:38:33] 2025-11-26 05:37:30,204 | INFO     | current chi2=2.901200400265191 (change=51.70590762155107 %)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,205 | INFO     | sum of square deviations: 467916177880.20764
[2025-11-26 00:38:33] 2025-11-26 05:37:30,248 | INFO     | sum of deviations: 2796751412244.332
[2025-11-26 00:38:33] 2025-11-26 05:37:30,248 | INFO     | mean x: 1764099870.6338274
[2025-11-26 00:38:33] 2025-11-26 05:37:30,249 | INFO     | mean y: 2874019.300784656
[2025-11-26 00:38:33] 2025-11-26 05:37:30,249 | INFO     | intersect: -10541212801.733006
[2025-11-26 00:38:33] 2025-11-26 05:37:30,250 | INFO     | chi2: 2.4705224275598363
[2025-11-26 00:38:33] 2025-11-26 05:37:30,250 | INFO     | current chi2=2.4705224275598363 (change=14.844819843054879 %)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,250 | INFO     | right removable region: 1146
[2025-11-26 00:38:33] 2025-11-26 05:37:30,251 | INFO     | sum of square deviations: 474061451167.2074
[2025-11-26 00:38:33] 2025-11-26 05:37:30,276 | INFO     | sum of deviations: 2007813877955.4294
[2025-11-26 00:38:33] 2025-11-26 05:37:30,276 | INFO     | mean x: 1764100328.1310763
[2025-11-26 00:38:33] 2025-11-26 05:37:30,276 | INFO     | mean y: 2869235.831597222
[2025-11-26 00:38:33] 2025-11-26 05:37:30,276 | INFO     | intersect: -7468704570.067248
[2025-11-26 00:38:33] 2025-11-26 05:37:30,277 | INFO     | chi2: 3.9881629152133273
[2025-11-26 00:38:33] 2025-11-26 05:37:30,278 | INFO     | current chi2=3.9881629152133273 (change=33.61206339623726 %)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,279 | INFO     | sum of square deviations: 467915642301.52405
[2025-11-26 00:38:33] 2025-11-26 05:37:30,304 | INFO     | sum of deviations: 1923855317826.71
[2025-11-26 00:38:33] 2025-11-26 05:37:30,304 | INFO     | mean x: 1764100480.6294682
[2025-11-26 00:38:33] 2025-11-26 05:37:30,304 | INFO     | mean y: 2871319.422842197
[2025-11-26 00:38:33] 2025-11-26 05:37:30,304 | INFO     | intersect: -7250303791.685434
[2025-11-26 00:38:33] 2025-11-26 05:37:30,305 | INFO     | chi2: 3.920368520726482
[2025-11-26 00:38:33] 2025-11-26 05:37:30,305 | INFO     | current chi2=3.920368520726482 (change=1.69989029856919 %)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,305 | INFO     | left removable region: 20
[2025-11-26 00:38:33] 2025-11-26 05:37:30,306 | INFO     | sum of square deviations: 442682755339.1091
[2025-11-26 00:38:33] 2025-11-26 05:37:30,330 | INFO     | sum of deviations: 2282804334619.321
[2025-11-26 00:38:33] 2025-11-26 05:37:30,331 | INFO     | mean x: 1764100450.1394317
[2025-11-26 00:38:33] 2025-11-26 05:37:30,331 | INFO     | mean y: 2887705.74955595
[2025-11-26 00:38:33] 2025-11-26 05:37:30,331 | INFO     | intersect: -9094137434.06486
[2025-11-26 00:38:33] 2025-11-26 05:37:30,332 | INFO     | chi2: 0.2526144210893002
[2025-11-26 00:38:33] 2025-11-26 05:37:30,332 | INFO     | current memory leak: 5.16 B/s (using 1126 data points, chi2=0.25)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | could have reported an average CPU frequency of 2616 MHz (42 samples)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | ..............................
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | . Timing measurements:
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | . get job = 0 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | . initial setup = 2 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,333 | INFO     | . payload setup = 5 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,334 | INFO     | . stage-in = 0 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,334 | INFO     | . payload execution = 70525 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,334 | INFO     | . stage-out = 3 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,334 | INFO     | . log creation = 0 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,334 | INFO     | ..............................
[2025-11-26 00:38:33] 2025-11-26 05:37:30,509 | INFO     | 
[2025-11-26 00:38:33] 2025-11-26 05:37:30,509 | INFO     | job summary report
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | --------------------------------------------------
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | PanDA job id: 6895375021
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | task id: 47556137
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | errors: (none)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | pilot state: finished 
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | transexitcode: 0
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | exeerrorcode: 0
[2025-11-26 00:38:33] 2025-11-26 05:37:30,510 | INFO     | exeerrordiag: 
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | exitcode: 0
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | exitmsg: OK
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | cpuconsumptiontime: 543423 s
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | nevents: 1000
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | neventsw: 0
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | pid: 21166
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | pgrp: 21166
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | corecount: 8
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | event service: False
[2025-11-26 00:38:33] 2025-11-26 05:37:30,511 | INFO     | sizes: {0: 2283486, 1: 2284342, 2: 2284342, 5: 2284632, 12: 2284688, 70535: 2341319, 70536: 2341446, 70539: 2350552, 70545: 2350742}
[2025-11-26 00:38:33] 2025-11-26 05:37:30,512 | INFO     | --------------------------------------------------
[2025-11-26 00:38:33] 2025-11-26 05:37:30,512 | INFO     | 
[2025-11-26 00:38:33] 2025-11-26 05:37:30,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:38:33] 2025-11-26 05:37:30,532 | INFO     | job 6895375021 has completed (purged errors)
[2025-11-26 00:38:33] 2025-11-26 05:37:30,532 | INFO     | overall cleanup function is called
[2025-11-26 00:38:33] 2025-11-26 05:37:31,545 | INFO     | --- collectZombieJob: --- 10, [21166]
[2025-11-26 00:38:33] 2025-11-26 05:37:31,545 | INFO     | zombie collector waiting for pid 21166
[2025-11-26 00:38:33] 2025-11-26 05:37:31,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:38:33] 2025-11-26 05:37:31,545 | INFO     | collected zombie processes
[2025-11-26 00:38:33] 2025-11-26 05:37:31,545 | INFO     | will attempt to kill all subprocesses of pid=21166
[2025-11-26 00:38:33] 2025-11-26 05:37:31,670 | INFO     | process IDs to be killed: [21166] (in reverse order)
[2025-11-26 00:38:33] 2025-11-26 05:37:31,715 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:38:33] 2025-11-26 05:37:31,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:38:33] 2025-11-26 05:37:31,718 | INFO     | did not find any defunct processes belonging to 21166
[2025-11-26 00:38:33] 2025-11-26 05:37:31,721 | INFO     | did not find any defunct processes belonging to 21166
[2025-11-26 00:38:33] 2025-11-26 05:37:31,722 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:38:33] 2025-11-26 05:37:31,723 | INFO     | ready for new job
[2025-11-26 00:38:33] 2025-11-26 05:37:31,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:38:33] 2025-11-26 05:37:31,726 | INFO     | ***************************************
[2025-11-26 00:38:33] 2025-11-26 05:37:31,727 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:38:33] 2025-11-26 05:37:31,727 | INFO     | ***************************************
[2025-11-26 00:38:33] 2025-11-26 05:37:31,727 | INFO     | 
[2025-11-26 00:38:33] 2025-11-26 05:37:31,728 | INFO     | architecture information:
[2025-11-26 00:38:33] 2025-11-26 05:37:31,728 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:38:33] 2025-11-26 05:37:31,741 | INFO     | cat /etc/os-release:
[2025-11-26 00:38:33] NAME="CentOS Linux"
[2025-11-26 00:38:33] VERSION="7 (Core)"
[2025-11-26 00:38:33] ID="centos"
[2025-11-26 00:38:33] ID_LIKE="rhel fedora"
[2025-11-26 00:38:33] VERSION_ID="7"
[2025-11-26 00:38:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:38:33] ANSI_COLOR="0;31"
[2025-11-26 00:38:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:38:33] HOME_URL="https://www.centos.org/"
[2025-11-26 00:38:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:38:33] 
[2025-11-26 00:38:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:38:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:38:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:38:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:38:33] 
[2025-11-26 00:38:33] 2025-11-26 05:37:31,741 | INFO     | ***************************************
[2025-11-26 00:38:33] 2025-11-26 05:37:32,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 00:38:33] 2025-11-26 05:37:32,260 | INFO     | sufficient remaining disk space (25540165632 B)
[2025-11-26 00:38:33] 2025-11-26 05:37:32,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:38:33] 2025-11-26 05:37:32,260 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:38:33] 2025-11-26 05:37:32,261 | INFO     | update_server=False
[2025-11-26 00:38:33] 2025-11-26 05:37:32,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:38:33] 2025-11-26 05:37:32,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:38:33] 2025-11-26 05:37:32,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:38:33] 2025-11-26 05:37:32,556 | INFO     | aborting loop
[2025-11-26 00:38:33] 2025-11-26 05:37:32,756 | INFO     | all data control threads have been joined
[2025-11-26 00:38:33] 2025-11-26 05:37:33,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:38:33] 2025-11-26 05:37:33,255 | INFO     | all payload control threads have been joined
[2025-11-26 00:38:33] 2025-11-26 05:37:33,264 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,267 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,384 | INFO     | all job control threads have been joined
[2025-11-26 00:38:33] 2025-11-26 05:37:33,561 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,698 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,762 | INFO     | [data] control thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,866 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:33,866 | INFO     | [job] validate thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,034 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,063 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,261 | INFO     | [payload] control thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,322 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,389 | INFO     | [job] control thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:34,703 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:35,035 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:35,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:38:33] 2025-11-26 05:37:39,610 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:37:43,166 | INFO     | job.realtimelogging is not enabled
[2025-11-26 00:38:33] 2025-11-26 05:37:44,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:38:33] 2025-11-26 05:38:02,981 | INFO     | PID=14747 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:38:33] 2025-11-26 05:38:02,981 | INFO     | .. there are 3 such processes running
[2025-11-26 00:38:33] 2025-11-26 05:38:02,982 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:38:33] 2025-11-26 05:38:02,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:38:33] 2025-11-26 05:38:02,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:38:33] 2025-11-26 05:38:26,294 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:38:33] 2025-11-26 05:38:27,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985564276544)>', '<ExcThread(monitor, started 139984954697472)>']
[2025-11-26 00:38:33] 2025-11-26 05:38:28,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:38:33] 2025-11-26 05:38:28,106 | INFO     | [monitor] control thread has ended
[2025-11-26 00:38:33] 2025-11-26 05:38:32,916 | INFO     | all workflow threads have been joined
[2025-11-26 00:38:33] 2025-11-26 05:38:32,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:38:33] 2025-11-26 05:38:32,916 | INFO     | traces error code: 0
[2025-11-26 00:38:33] 2025-11-26 05:38:32,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:38:33] 2025-11-26 05:38:32,996 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:38:33] 2025-11-26 05:38:32,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:38:33] 2025-11-26 05:38:33,001 [wrapper] pilotpid: 14747
[2025-11-26 00:38:33] 2025-11-26 05:38:33,003 [wrapper] Pilot exit status: 0
[2025-11-26 00:38:33] 2025-11-26 05:38:33,010 [wrapper] pandaids: 6895375021
[2025-11-26 00:38:33] 2025-11-26 05:38:33,048 [wrapper] cleanup supervisor_pilot  4934 14748
[2025-11-26 00:38:33] 2025-11-26 05:38:33,051 [wrapper] Test setup, not cleaning
[2025-11-26 00:38:33] 2025-11-26 05:38:33,054 [wrapper] apfmon messages muted
[2025-11-26 00:38:33] 2025-11-26 05:38:33,056 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:38:33] 2025-11-26 05:38:33,059 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:38:33]  *** Error codes and diagnostics ***
[2025-11-26 00:38:33]     "exeErrorCode": 0,
[2025-11-26 00:38:33]     "exeErrorDiag": "",
[2025-11-26 00:38:33]     "pilotErrorCode": 0,
[2025-11-26 00:38:33]     "pilotErrorDiag": "",
[2025-11-26 00:38:33]  *** Listing of results directory ***
[2025-11-26 00:38:33] total 1319636
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-26 00:38:33] -rwx------ 1 boincer umatlas     36292 Nov 23 18:36 runpilot2-wrapper.sh
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 18:36 queuedata.json
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas       100 Nov 25 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:38:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 05:01 run_atlas
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas       105 Nov 25 05:01 job.xml
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas 408314781 Nov 25 05:01 EVNT.47483658._000949.pool.root.1
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:01 start_atlas.sh
[2025-11-26 00:38:33] drwxrwx--x 2 boincer umatlas      4096 Nov 25 05:01 shared
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas    590097 Nov 25 05:01 input.tar.gz
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas         0 Nov 25 05:01 boinc_lockfile
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 05:01 pandaJob.out
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas        57 Nov 25 05:01 setup.sh.local
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas    991894 Nov 25 05:01 agis_schedconf.cvmfs.json
[2025-11-26 00:38:33] drwx------ 5 boincer umatlas      4096 Nov 25 05:01 pilot3
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas       533 Nov 26 00:25 boinc_task_state.xml
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 00:36 init_data.xml
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas 914943654 Nov 26 00:36 HITS.47556137._009354.pool.root.1
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas      1067 Nov 26 00:37 memory_monitor_summary.json
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas        95 Nov 26 00:37 pilot_heartbeat.json
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas   1516240 Nov 26 00:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas   2313839 Nov 26 00:37 log.47556137._009354.job.log.tgz.1
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas      8651 Nov 26 00:37 heartbeat.json
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 00:38 boinc_mmap_file
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas        29 Nov 26 00:38 wrapper_checkpoint.txt
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas      4893 Nov 26 00:38 pilotlog.txt
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas   9751458 Nov 26 00:38 log.47556137._009354.job.log.1
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas       353 Nov 26 00:38 output.list
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas       620 Nov 26 00:38 runtime_log
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas  12083200 Nov 26 00:38 result.tar.gz
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 00:38 runtime_log.err
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas       668 Nov 26 00:38 q2KKDm0nYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4HLKDmq4ceCn.diag
[2025-11-26 00:38:33] -rw-r--r-- 1 boincer umatlas     21286 Nov 26 00:38 stderr.txt
[2025-11-26 00:38:33] HITS file was successfully produced:
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas 914943654 Nov 26 00:36 shared/HITS.pool.root.1
[2025-11-26 00:38:33]  *** Contents of shared directory: ***
[2025-11-26 00:38:33] total 1304652
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas 408314781 Nov 25 05:01 ATLAS.root_0
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:01 start_atlas.sh
[2025-11-26 00:38:33] -rw-r--r-- 2 boincer umatlas    590097 Nov 25 05:01 input.tar.gz
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas 914943654 Nov 26 00:36 HITS.pool.root.1
[2025-11-26 00:38:33] -rw------- 1 boincer umatlas  12083200 Nov 26 00:38 result.tar.gz
00:38:34 (10346): run_atlas exited; CPU time 542178.669097
00:38:34 (10346): called boinc_finish(0)

</stderr_txt>
]]>

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