Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:29 (17495): wrapper (7.7.26015): starting
05:19:29 (17495): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:19:29] Arguments: --nthreads 8
[2025-11-25 05:19:29] Threads: 8
[2025-11-25 05:19:29] Checking for CVMFS
[2025-11-25 05:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:19:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:19:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:19:30] 2.11.2.0 2466 116101 134188 153279 1 72 11480252 18432001 1885 130560 0 82177970 99.973 5017708 28224 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 05:19:30] CVMFS is ok
[2025-11-25 05:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:19:30] Further information can be found at the LHC@home message board.
[2025-11-25 05:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:19:30] Checking for apptainer binary...
[2025-11-25 05:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:19:30] Running /usr/bin/apptainer --version
[2025-11-25 05:19:30] apptainer version 1.3.2-1.el7
[2025-11-25 05:19:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:19:31] c-206-20.aglt2.org
[2025-11-25 05:19:31] apptainer works
[2025-11-25 05:19:31] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:19:31] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:19:31] Starting ATLAS job with PandaID=6895374009
[2025-11-25 05:19:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:05:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:05:04] 2025-11-26 06:04:29,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 01:05:04] 2025-11-26 06:04:30,567 | INFO     | time since job start (71088s) is within the limit (172800.0s)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,482 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 01:05:04] 2025-11-26 06:04:31,486 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.7083333333335
[2025-11-26 01:05:04] 2025-11-26 06:04:31,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895374009/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,489 | INFO     | extracted standard info from prmon json
[2025-11-26 01:05:04] 2025-11-26 06:04:31,489 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:05:04] 2025-11-26 06:04:31,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:05:04] 2025-11-26 06:04:31,504 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:05:04] 2025-11-26 06:04:31,505 | INFO     | sum of square deviations: 490292338908.51025
[2025-11-26 01:05:04] 2025-11-26 06:04:31,529 | INFO     | sum of deviations: 2265684097811.748
[2025-11-26 01:05:04] 2025-11-26 06:04:31,529 | INFO     | mean x: 1764101510.6515021
[2025-11-26 01:05:04] 2025-11-26 06:04:31,529 | INFO     | mean y: 2872255.287553648
[2025-11-26 01:05:04] 2025-11-26 06:04:31,529 | INFO     | intersect: -8149196260.624178
[2025-11-26 01:05:04] 2025-11-26 06:04:31,530 | INFO     | chi2: 5.3314155552725015
[2025-11-26 01:05:04] 2025-11-26 06:04:31,531 | INFO     | sum of square deviations: 484006833941.3801
[2025-11-26 01:05:04] 2025-11-26 06:04:31,560 | INFO     | sum of deviations: 2605953786089.2773
[2025-11-26 01:05:04] 2025-11-26 06:04:31,560 | INFO     | mean x: 1764101358.1543102
[2025-11-26 01:05:04] 2025-11-26 06:04:31,560 | INFO     | mean y: 2880508.7637931034
[2025-11-26 01:05:04] 2025-11-26 06:04:31,560 | INFO     | intersect: -9495263506.872648
[2025-11-26 01:05:04] 2025-11-26 06:04:31,562 | INFO     | chi2: 2.852541223007413
[2025-11-26 01:05:04] 2025-11-26 06:04:31,562 | INFO     | current chi2=2.852541223007413 (change=46.49561277986681 %)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,564 | INFO     | sum of square deviations: 477775283474.22845
[2025-11-26 01:05:04] 2025-11-26 06:04:31,609 | INFO     | sum of deviations: 2736859431035.342
[2025-11-26 01:05:04] 2025-11-26 06:04:31,610 | INFO     | mean x: 1764101205.6571429
[2025-11-26 01:05:04] 2025-11-26 06:04:31,610 | INFO     | mean y: 2883708.4554112554
[2025-11-26 01:05:04] 2025-11-26 06:04:31,610 | INFO     | intersect: -10102488396.386843
[2025-11-26 01:05:04] 2025-11-26 06:04:31,612 | INFO     | chi2: 2.318250470022137
[2025-11-26 01:05:04] 2025-11-26 06:04:31,612 | INFO     | current chi2=2.318250470022137 (change=18.730342919355852 %)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,612 | INFO     | right removable region: 1154
[2025-11-26 01:05:04] 2025-11-26 06:04:31,614 | INFO     | sum of square deviations: 484006370951.3801
[2025-11-26 01:05:04] 2025-11-26 06:04:31,659 | INFO     | sum of deviations: 1961309935154.7544
[2025-11-26 01:05:04] 2025-11-26 06:04:31,659 | INFO     | mean x: 1764101663.1543102
[2025-11-26 01:05:04] 2025-11-26 06:04:31,659 | INFO     | mean y: 2879631.459482759
[2025-11-26 01:05:04] 2025-11-26 06:04:31,659 | INFO     | intersect: -7145683540.894164
[2025-11-26 01:05:04] 2025-11-26 06:04:31,661 | INFO     | chi2: 3.2726678289555426
[2025-11-26 01:05:04] 2025-11-26 06:04:31,661 | INFO     | current chi2=3.2726678289555426 (change=38.61540532665778 %)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,663 | INFO     | sum of square deviations: 477774569653.16376
[2025-11-26 01:05:04] 2025-11-26 06:04:31,709 | INFO     | sum of deviations: 1884210940529.1604
[2025-11-26 01:05:04] 2025-11-26 06:04:31,709 | INFO     | mean x: 1764101815.6545455
[2025-11-26 01:05:04] 2025-11-26 06:04:31,710 | INFO     | mean y: 2881517.7974025975
[2025-11-26 01:05:04] 2025-11-26 06:04:31,710 | INFO     | intersect: -6954248795.096052
[2025-11-26 01:05:04] 2025-11-26 06:04:31,711 | INFO     | chi2: 3.2197448622469187
[2025-11-26 01:05:04] 2025-11-26 06:04:31,712 | INFO     | current chi2=3.2197448622469187 (change=1.6171200217870594 %)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,712 | INFO     | left removable region: 20
[2025-11-26 01:05:04] 2025-11-26 06:04:31,713 | INFO     | sum of square deviations: 452185624594.10986
[2025-11-26 01:05:04] 2025-11-26 06:04:31,759 | INFO     | sum of deviations: 2256504095386.443
[2025-11-26 01:05:04] 2025-11-26 06:04:31,759 | INFO     | mean x: 1764101785.159612
[2025-11-26 01:05:04] 2025-11-26 06:04:31,759 | INFO     | mean y: 2896056.8262786595
[2025-11-26 01:05:04] 2025-11-26 06:04:31,760 | INFO     | intersect: -8800353507.916855
[2025-11-26 01:05:04] 2025-11-26 06:04:31,761 | INFO     | chi2: 0.15400140467202447
[2025-11-26 01:05:04] 2025-11-26 06:04:31,761 | INFO     | current memory leak: 4.99 B/s (using 1134 data points, chi2=0.15)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,763 | INFO     | could have reported an average CPU frequency of 2636 MHz (42 samples)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,763 | INFO     | ..............................
[2025-11-26 01:05:04] 2025-11-26 06:04:31,763 | INFO     | . Timing measurements:
[2025-11-26 01:05:04] 2025-11-26 06:04:31,763 | INFO     | . get job = 0 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,763 | INFO     | . initial setup = 2 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | . payload setup = 5 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | . stage-in = 0 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | . payload execution = 71053 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | . stage-out = 4 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | . log creation = 0 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,764 | INFO     | ..............................
[2025-11-26 01:05:04] 2025-11-26 06:04:31,921 | INFO     | 
[2025-11-26 01:05:04] 2025-11-26 06:04:31,921 | INFO     | job summary report
[2025-11-26 01:05:04] 2025-11-26 06:04:31,921 | INFO     | --------------------------------------------------
[2025-11-26 01:05:04] 2025-11-26 06:04:31,921 | INFO     | PanDA job id: 6895374009
[2025-11-26 01:05:04] 2025-11-26 06:04:31,921 | INFO     | task id: 47556137
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | errors: (none)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | pilot state: finished 
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | transexitcode: 0
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | exeerrorcode: 0
[2025-11-26 01:05:04] 2025-11-26 06:04:31,922 | INFO     | exeerrordiag: 
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | exitcode: 0
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | exitmsg: OK
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | cpuconsumptiontime: 551374 s
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | nevents: 1000
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | neventsw: 0
[2025-11-26 01:05:04] 2025-11-26 06:04:31,923 | INFO     | pid: 28124
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | pgrp: 28124
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | corecount: 8
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | event service: False
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 12: 2284661, 71062: 2341599, 71067: 2350805, 71074: 2350995}
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | --------------------------------------------------
[2025-11-26 01:05:04] 2025-11-26 06:04:31,924 | INFO     | 
[2025-11-26 01:05:04] 2025-11-26 06:04:31,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 01:05:04] 2025-11-26 06:04:31,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:05:04] 2025-11-26 06:04:31,947 | INFO     | job 6895374009 has completed (purged errors)
[2025-11-26 01:05:04] 2025-11-26 06:04:31,947 | INFO     | overall cleanup function is called
[2025-11-26 01:05:04] 2025-11-26 06:04:32,961 | INFO     | --- collectZombieJob: --- 10, [28124]
[2025-11-26 01:05:04] 2025-11-26 06:04:32,961 | INFO     | zombie collector waiting for pid 28124
[2025-11-26 01:05:04] 2025-11-26 06:04:32,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:05:04] 2025-11-26 06:04:32,961 | INFO     | collected zombie processes
[2025-11-26 01:05:04] 2025-11-26 06:04:32,961 | INFO     | will attempt to kill all subprocesses of pid=28124
[2025-11-26 01:05:04] 2025-11-26 06:04:33,128 | INFO     | process IDs to be killed: [28124] (in reverse order)
[2025-11-26 01:05:04] 2025-11-26 06:04:33,188 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:05:04] 2025-11-26 06:04:33,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:05:04] 2025-11-26 06:04:33,194 | INFO     | did not find any defunct processes belonging to 28124
[2025-11-26 01:05:04] 2025-11-26 06:04:33,198 | INFO     | did not find any defunct processes belonging to 28124
[2025-11-26 01:05:04] 2025-11-26 06:04:33,200 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:05:04] 2025-11-26 06:04:33,200 | INFO     | ready for new job
[2025-11-26 01:05:04] 2025-11-26 06:04:33,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:05:04] 2025-11-26 06:04:33,205 | INFO     | ***************************************
[2025-11-26 01:05:04] 2025-11-26 06:04:33,206 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:05:04] 2025-11-26 06:04:33,206 | INFO     | ***************************************
[2025-11-26 01:05:04] 2025-11-26 06:04:33,206 | INFO     | 
[2025-11-26 01:05:04] 2025-11-26 06:04:33,207 | INFO     | architecture information:
[2025-11-26 01:05:04] 2025-11-26 06:04:33,208 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:05:04] 2025-11-26 06:04:33,221 | INFO     | cat /etc/os-release:
[2025-11-26 01:05:04] NAME="CentOS Linux"
[2025-11-26 01:05:04] VERSION="7 (Core)"
[2025-11-26 01:05:04] ID="centos"
[2025-11-26 01:05:04] ID_LIKE="rhel fedora"
[2025-11-26 01:05:04] VERSION_ID="7"
[2025-11-26 01:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:05:04] ANSI_COLOR="0;31"
[2025-11-26 01:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:05:04] HOME_URL="https://www.centos.org/"
[2025-11-26 01:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:05:04] 
[2025-11-26 01:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:05:04] 
[2025-11-26 01:05:04] 2025-11-26 06:04:33,222 | INFO     | ***************************************
[2025-11-26 01:05:04] 2025-11-26 06:04:33,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 01:05:04] 2025-11-26 06:04:33,739 | INFO     | sufficient remaining disk space (25481445376 B)
[2025-11-26 01:05:04] 2025-11-26 06:04:33,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:05:04] 2025-11-26 06:04:33,739 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:05:04] 2025-11-26 06:04:33,739 | INFO     | update_server=False
[2025-11-26 01:05:04] 2025-11-26 06:04:33,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:05:04] 2025-11-26 06:04:33,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:05:04] 2025-11-26 06:04:33,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:05:04] 2025-11-26 06:04:33,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:05:04] 2025-11-26 06:04:33,740 | INFO     | aborting loop
[2025-11-26 01:05:04] 2025-11-26 06:04:34,093 | INFO     | all data control threads have been joined
[2025-11-26 01:05:04] 2025-11-26 06:04:34,745 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:34,746 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:34,746 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:34,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:34,953 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:34,984 | INFO     | all job control threads have been joined
[2025-11-26 01:05:04] 2025-11-26 06:04:35,036 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,055 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,099 | INFO     | [data] control thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,158 | INFO     | all payload control threads have been joined
[2025-11-26 01:05:04] 2025-11-26 06:04:35,698 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,733 | INFO     | [job] validate thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,746 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:35,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:05:04] 2025-11-26 06:04:35,990 | INFO     | [job] control thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:36,109 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:36,159 | INFO     | [payload] control thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:36,303 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:39,588 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:05:04] 2025-11-26 06:04:39,874 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:05:04] 2025-11-26 06:04:41,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445730076480)>', '<ExcThread(monitor, started 140444977567488)>']
[2025-11-26 01:05:04] 2025-11-26 06:04:46,863 | INFO     | all workflow threads have been joined
[2025-11-26 01:05:04] 2025-11-26 06:04:46,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:05:04] 2025-11-26 06:04:46,863 | INFO     | traces error code: 0
[2025-11-26 01:05:04] 2025-11-26 06:04:46,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:05:04] 2025-11-26 06:04:47,400 [wrapper] supervise_pilot (15 min periods counter: 80)
[2025-11-26 01:05:04] 2025-11-26 06:05:03,794 | INFO     | PID=21547 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 01:05:04] 2025-11-26 06:05:03,795 | INFO     | .. there are 3 such processes running
[2025-11-26 01:05:04] 2025-11-26 06:05:03,795 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:05:04] 2025-11-26 06:05:03,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:05:04] 2025-11-26 06:05:03,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:05:04] 2025-11-26 06:05:03,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:05:04] 2025-11-26 06:05:03,796 | INFO     | [monitor] control thread has ended
[2025-11-26 01:05:04] 2025-11-26 06:05:03,915 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:05:04] 2025-11-26 06:05:03,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:05:04] 2025-11-26 06:05:03,918 [wrapper] pilotpid: 21547
[2025-11-26 01:05:04] 2025-11-26 06:05:03,921 [wrapper] Pilot exit status: 0
[2025-11-26 01:05:04] 2025-11-26 06:05:03,928 [wrapper] pandaids: 6895374009
[2025-11-26 01:05:04] 2025-11-26 06:05:03,969 [wrapper] cleanup supervisor_pilot   740 21548
[2025-11-26 01:05:04] 2025-11-26 06:05:03,971 [wrapper] Test setup, not cleaning
[2025-11-26 01:05:04] 2025-11-26 06:05:03,974 [wrapper] apfmon messages muted
[2025-11-26 01:05:04] 2025-11-26 06:05:03,976 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:05:04] 2025-11-26 06:05:03,978 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:05:04]  *** Error codes and diagnostics ***
[2025-11-26 01:05:04]     "exeErrorCode": 0,
[2025-11-26 01:05:04]     "exeErrorDiag": "",
[2025-11-26 01:05:04]     "pilotErrorCode": 0,
[2025-11-26 01:05:04]     "pilotErrorDiag": "",
[2025-11-26 01:05:04]  *** Listing of results directory ***
[2025-11-26 01:05:04] total 1344700
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:41 queuedata.json
[2025-11-26 01:05:04] -rwx------ 1 boincer umatlas     36292 Nov 23 17:42 runpilot2-wrapper.sh
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas       100 Nov 25 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:05:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 05:19 run_atlas
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas       105 Nov 25 05:19 job.xml
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas 412104557 Nov 25 05:19 EVNT.47483658._000930.pool.root.1
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:19 start_atlas.sh
[2025-11-26 01:05:04] drwxrwx--x 2 boincer umatlas      4096 Nov 25 05:19 shared
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 05:19 input.tar.gz
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas         0 Nov 25 05:19 boinc_lockfile
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 05:19 pandaJob.out
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas        57 Nov 25 05:19 setup.sh.local
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas    991894 Nov 25 05:19 agis_schedconf.cvmfs.json
[2025-11-26 01:05:04] drwx------ 5 boincer umatlas      4096 Nov 25 05:19 pilot3
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas       533 Nov 26 00:52 boinc_task_state.xml
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 01:02 init_data.xml
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas 936614486 Nov 26 01:03 HITS.47556137._009167.pool.root.1
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas      1080 Nov 26 01:04 memory_monitor_summary.json
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas        95 Nov 26 01:04 pilot_heartbeat.json
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas   1516240 Nov 26 01:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas   2333087 Nov 26 01:04 log.47556137._009167.job.log.tgz.1
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 01:04 boinc_mmap_file
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas        29 Nov 26 01:04 wrapper_checkpoint.txt
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas      8675 Nov 26 01:04 heartbeat.json
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas       820 Nov 26 01:05 pilotlog.txt
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas   9835170 Nov 26 01:05 log.47556137._009167.job.log.1
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas       353 Nov 26 01:05 output.list
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas       620 Nov 26 01:05 runtime_log
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas  12185600 Nov 26 01:05 result.tar.gz
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 01:05 runtime_log.err
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas       668 Nov 26 01:05 FpzKDmsxXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6nIKDmgPHBSm.diag
[2025-11-26 01:05:04] -rw-r--r-- 1 boincer umatlas     21280 Nov 26 01:05 stderr.txt
[2025-11-26 01:05:04] HITS file was successfully produced:
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas 936614486 Nov 26 01:03 shared/HITS.pool.root.1
[2025-11-26 01:05:04]  *** Contents of shared directory: ***
[2025-11-26 01:05:04] total 1329616
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas 412104557 Nov 25 05:19 ATLAS.root_0
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:19 start_atlas.sh
[2025-11-26 01:05:04] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 05:19 input.tar.gz
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas 936614486 Nov 26 01:03 HITS.pool.root.1
[2025-11-26 01:05:04] -rw------- 1 boincer umatlas  12185600 Nov 26 01:05 result.tar.gz
01:05:05 (17495): run_atlas exited; CPU time 550487.067177
01:05:05 (17495): called boinc_finish(0)

</stderr_txt>
]]>

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