Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:09:52 (9997): wrapper (7.7.26015): starting
05:09:52 (9997): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:09:52] Arguments: --nthreads 8
[2025-11-25 05:09:52] Threads: 8
[2025-11-25 05:09:52] Checking for CVMFS
[2025-11-25 05:09:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:09:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:09:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:09:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:09:53] 2.11.2.0 2878 55918 80020 153277 1 82 16241533 20275200 1 130560 0 11544629 99.785 3351910 31016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 05:09:53] CVMFS is ok
[2025-11-25 05:09:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:09:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:09:53] Further information can be found at the LHC@home message board.
[2025-11-25 05:09:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:09:53] Checking for apptainer binary...
[2025-11-25 05:09:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:09:53] Running /usr/bin/apptainer --version
[2025-11-25 05:09:53] apptainer version 1.3.2-1.el7
[2025-11-25 05:09:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:09:55] c-204-27.aglt2.org
[2025-11-25 05:09:55] apptainer works
[2025-11-25 05:09:55] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:09:55] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:09:55] Starting ATLAS job with PandaID=6895559432
[2025-11-25 05:09:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:34:32]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:34:32] 2025-11-25 22:33:30,742 | INFO     | monitor loop #3277: job 0:6895559432 is in state 'finished'
[2025-11-25 17:34:32] 2025-11-25 22:33:30,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,578 | INFO     | time since job start (44600s) is within the limit (172800.0s)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,783 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 17:34:32] 2025-11-25 22:33:32,787 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-25 17:34:32] 2025-11-25 22:33:32,789 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559432/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,790 | INFO     | extracted standard info from prmon json
[2025-11-25 17:34:32] 2025-11-25 22:33:32,790 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:34:32] 2025-11-25 22:33:32,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:34:32] 2025-11-25 22:33:32,803 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:34:32] 2025-11-25 22:33:32,804 | INFO     | sum of square deviations: 121124046507.86319
[2025-11-25 17:34:32] 2025-11-25 22:33:32,818 | INFO     | sum of deviations: 868520774106.6387
[2025-11-25 17:34:32] 2025-11-25 22:33:32,818 | INFO     | mean x: 1764087709.6607387
[2025-11-25 17:34:32] 2025-11-25 22:33:32,818 | INFO     | mean y: 3185863.147742818
[2025-11-25 17:34:32] 2025-11-25 22:33:32,818 | INFO     | intersect: -12646216690.350067
[2025-11-25 17:34:32] 2025-11-25 22:33:32,819 | INFO     | chi2: 6.907693571855358
[2025-11-25 17:34:32] 2025-11-25 22:33:32,820 | INFO     | sum of square deviations: 118655710328.16527
[2025-11-25 17:34:32] 2025-11-25 22:33:32,831 | INFO     | sum of deviations: 1170944968192.2993
[2025-11-25 17:34:32] 2025-11-25 22:33:32,831 | INFO     | mean x: 1764087557.1652892
[2025-11-25 17:34:32] 2025-11-25 22:33:32,831 | INFO     | mean y: 3204550.2975206613
[2025-11-25 17:34:32] 2025-11-25 22:33:32,831 | INFO     | intersect: -17405561052.305073
[2025-11-25 17:34:32] 2025-11-25 22:33:32,832 | INFO     | chi2: 3.0897280431060574
[2025-11-25 17:34:32] 2025-11-25 22:33:32,832 | INFO     | current chi2=3.0897280431060574 (change=55.271205779960816 %)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,833 | INFO     | sum of square deviations: 116221142223.43666
[2025-11-25 17:34:32] 2025-11-25 22:33:32,844 | INFO     | sum of deviations: 1243257800105.6602
[2025-11-25 17:34:32] 2025-11-25 22:33:32,844 | INFO     | mean x: 1764087404.6699028
[2025-11-25 17:34:32] 2025-11-25 22:33:32,844 | INFO     | mean y: 3209068.8599167825
[2025-11-25 17:34:32] 2025-11-25 22:33:32,844 | INFO     | intersect: -18867844716.75442
[2025-11-25 17:34:32] 2025-11-25 22:33:32,845 | INFO     | chi2: 2.689086359483765
[2025-11-25 17:34:32] 2025-11-25 22:33:32,845 | INFO     | current chi2=2.689086359483765 (change=12.9668915203143 %)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,845 | INFO     | right removable region: 720
[2025-11-25 17:34:32] 2025-11-25 22:33:32,846 | INFO     | sum of square deviations: 118655415698.16536
[2025-11-25 17:34:32] 2025-11-25 22:33:32,856 | INFO     | sum of deviations: 635798398688.016
[2025-11-25 17:34:32] 2025-11-25 22:33:32,857 | INFO     | mean x: 1764087862.1652892
[2025-11-25 17:34:32] 2025-11-25 22:33:32,857 | INFO     | mean y: 3200217.849862259
[2025-11-25 17:34:32] 2025-11-25 22:33:32,857 | INFO     | intersect: -9449417105.263172
[2025-11-25 17:34:32] 2025-11-25 22:33:32,858 | INFO     | chi2: 4.485759984726427
[2025-11-25 17:34:32] 2025-11-25 22:33:32,858 | INFO     | current chi2=4.485759984726427 (change=35.0613929517203 %)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,859 | INFO     | sum of square deviations: 116220552963.43668
[2025-11-25 17:34:32] 2025-11-25 22:33:32,869 | INFO     | sum of deviations: 573079215917.8738
[2025-11-25 17:34:32] 2025-11-25 22:33:32,869 | INFO     | mean x: 1764088014.6699028
[2025-11-25 17:34:32] 2025-11-25 22:33:32,869 | INFO     | mean y: 3204144.9112343965
[2025-11-25 17:34:32] 2025-11-25 22:33:32,870 | INFO     | intersect: -8695448119.935572
[2025-11-25 17:34:32] 2025-11-25 22:33:32,870 | INFO     | chi2: 4.392418632315383
[2025-11-25 17:34:32] 2025-11-25 22:33:32,871 | INFO     | current chi2=4.392418632315383 (change=2.0808369758716956 %)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,871 | INFO     | left removable region: 20
[2025-11-25 17:34:32] 2025-11-25 22:33:32,871 | INFO     | sum of square deviations: 106358537288.67862
[2025-11-25 17:34:32] 2025-11-25 22:33:32,882 | INFO     | sum of deviations: 861745157619.5356
[2025-11-25 17:34:32] 2025-11-25 22:33:32,882 | INFO     | mean x: 1764087984.1785715
[2025-11-25 17:34:32] 2025-11-25 22:33:32,882 | INFO     | mean y: 3233190.3157142857
[2025-11-25 17:34:32] 2025-11-25 22:33:32,882 | INFO     | intersect: -14289876857.395613
[2025-11-25 17:34:32] 2025-11-25 22:33:32,883 | INFO     | chi2: 0.09134802339897413
[2025-11-25 17:34:32] 2025-11-25 22:33:32,883 | INFO     | current memory leak: 8.10 B/s (using 700 data points, chi2=0.09)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,883 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | ..............................
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . Timing measurements:
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . get job = 0 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . initial setup = 2 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . payload setup = 8 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . stage-in = 0 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . payload execution = 44553 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,884 | INFO     | . stage-out = 3 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,885 | INFO     | . log creation = 0 s
[2025-11-25 17:34:32] 2025-11-25 22:33:32,885 | INFO     | ..............................
[2025-11-25 17:34:32] 2025-11-25 22:33:33,402 | INFO     | 
[2025-11-25 17:34:32] 2025-11-25 22:33:33,402 | INFO     | job summary report
[2025-11-25 17:34:32] 2025-11-25 22:33:33,411 | INFO     | --------------------------------------------------
[2025-11-25 17:34:32] 2025-11-25 22:33:33,411 | INFO     | PanDA job id: 6895559432
[2025-11-25 17:34:32] 2025-11-25 22:33:33,411 | INFO     | task id: 47556149
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | errors: (none)
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | pilot state: finished 
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | transexitcode: 0
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | exeerrorcode: 0
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | exeerrordiag: 
[2025-11-25 17:34:32] 2025-11-25 22:33:33,412 | INFO     | exitcode: 0
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | exitmsg: OK
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | cpuconsumptiontime: 346207 s
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | nevents: 1000
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | neventsw: 0
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | pid: 20231
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | pgrp: 20231
[2025-11-25 17:34:32] 2025-11-25 22:33:33,413 | INFO     | corecount: 8
[2025-11-25 17:34:32] 2025-11-25 22:33:33,414 | INFO     | event service: False
[2025-11-25 17:34:32] 2025-11-25 22:33:33,414 | INFO     | sizes: {0: 2284143, 1: 2284342, 6: 2284604, 11: 2284632, 44566: 2330418, 44571: 2339412, 44574: 2339596, 44583: 2339842}
[2025-11-25 17:34:32] 2025-11-25 22:33:33,414 | INFO     | --------------------------------------------------
[2025-11-25 17:34:32] 2025-11-25 22:33:33,414 | INFO     | 
[2025-11-25 17:34:32] 2025-11-25 22:33:33,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 17:34:32] 2025-11-25 22:33:33,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:34:32] 2025-11-25 22:33:33,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:34:32] 2025-11-25 22:33:33,445 | INFO     | job 6895559432 has completed (purged errors)
[2025-11-25 17:34:32] 2025-11-25 22:33:33,445 | INFO     | overall cleanup function is called
[2025-11-25 17:34:32] 2025-11-25 22:33:34,461 | INFO     | --- collectZombieJob: --- 10, [20231]
[2025-11-25 17:34:32] 2025-11-25 22:33:34,461 | INFO     | zombie collector waiting for pid 20231
[2025-11-25 17:34:32] 2025-11-25 22:33:34,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:34:32] 2025-11-25 22:33:34,462 | INFO     | collected zombie processes
[2025-11-25 17:34:32] 2025-11-25 22:33:34,462 | INFO     | will attempt to kill all subprocesses of pid=20231
[2025-11-25 17:34:32] 2025-11-25 22:33:34,549 | INFO     | process IDs to be killed: [20231] (in reverse order)
[2025-11-25 17:34:32] 2025-11-25 22:33:34,607 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:34:32] 2025-11-25 22:33:34,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:34:32] 2025-11-25 22:33:34,612 | INFO     | did not find any defunct processes belonging to 20231
[2025-11-25 17:34:32] 2025-11-25 22:33:34,615 | INFO     | did not find any defunct processes belonging to 20231
[2025-11-25 17:34:32] 2025-11-25 22:33:34,618 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:34:32] 2025-11-25 22:33:34,618 | INFO     | ready for new job
[2025-11-25 17:34:32] 2025-11-25 22:33:34,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:34:32] 2025-11-25 22:33:34,621 | INFO     | ***************************************
[2025-11-25 17:34:32] 2025-11-25 22:33:34,621 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:34:32] 2025-11-25 22:33:34,621 | INFO     | ***************************************
[2025-11-25 17:34:32] 2025-11-25 22:33:34,621 | INFO     | 
[2025-11-25 17:34:32] 2025-11-25 22:33:34,622 | INFO     | architecture information:
[2025-11-25 17:34:32] 2025-11-25 22:33:34,623 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:34:32] 2025-11-25 22:33:34,641 | INFO     | cat /etc/os-release:
[2025-11-25 17:34:32] NAME="CentOS Linux"
[2025-11-25 17:34:32] VERSION="7 (Core)"
[2025-11-25 17:34:32] ID="centos"
[2025-11-25 17:34:32] ID_LIKE="rhel fedora"
[2025-11-25 17:34:32] VERSION_ID="7"
[2025-11-25 17:34:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:34:32] ANSI_COLOR="0;31"
[2025-11-25 17:34:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:34:32] HOME_URL="https://www.centos.org/"
[2025-11-25 17:34:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:34:32] 
[2025-11-25 17:34:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:34:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:34:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:34:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:34:32] 
[2025-11-25 17:34:32] 2025-11-25 22:33:34,641 | INFO     | ***************************************
[2025-11-25 17:34:32] 2025-11-25 22:33:35,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 17:34:32] 2025-11-25 22:33:35,167 | INFO     | sufficient remaining disk space (17439916032 B)
[2025-11-25 17:34:32] 2025-11-25 22:33:35,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:34:32] 2025-11-25 22:33:35,168 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:34:32] 2025-11-25 22:33:35,169 | INFO     | update_server=False
[2025-11-25 17:34:32] 2025-11-25 22:33:35,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:34:32] 2025-11-25 22:33:35,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:34:32] 2025-11-25 22:33:35,170 | INFO     | aborting loop
[2025-11-25 17:34:32] 2025-11-25 22:33:35,394 | INFO     | all payload control threads have been joined
[2025-11-25 17:34:32] 2025-11-25 22:33:35,440 | INFO     | all data control threads have been joined
[2025-11-25 17:34:32] 2025-11-25 22:33:36,170 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,175 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,196 | INFO     | all job control threads have been joined
[2025-11-25 17:34:32] 2025-11-25 22:33:36,230 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,243 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:34:32] 2025-11-25 22:33:36,361 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,399 | INFO     | [payload] control thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,426 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,446 | INFO     | [data] control thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:36,895 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:37,012 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:37,200 | INFO     | [job] control thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:37,673 | INFO     | [job] validate thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:37,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:34:32] 2025-11-25 22:33:38,357 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:38,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:34:32] 2025-11-25 22:33:38,990 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:42,588 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:33:45,447 | INFO     | job.realtimelogging is not enabled
[2025-11-25 17:34:32] 2025-11-25 22:33:46,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:34:32] 2025-11-25 22:34:05,795 | INFO     | PID=13793 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 17:34:32] 2025-11-25 22:34:05,796 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:34:32] 2025-11-25 22:34:05,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:34:32] 2025-11-25 22:34:05,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:34:32] 2025-11-25 22:34:26,312 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:34:32] 2025-11-25 22:34:27,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228865816384)>', '<ExcThread(monitor, started 140227964286720)>']
[2025-11-25 17:34:32] 2025-11-25 22:34:27,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:34:32] 2025-11-25 22:34:27,898 | INFO     | [monitor] control thread has ended
[2025-11-25 17:34:32] 2025-11-25 22:34:32,332 | INFO     | all workflow threads have been joined
[2025-11-25 17:34:32] 2025-11-25 22:34:32,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:34:32] 2025-11-25 22:34:32,333 | INFO     | traces error code: 0
[2025-11-25 17:34:32] 2025-11-25 22:34:32,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:34:32] 2025-11-25 22:34:32,439 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:34:32] 2025-11-25 22:34:32,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:34:32] 2025-11-25 22:34:32,449 [wrapper] pilotpid: 13793
[2025-11-25 17:34:32] 2025-11-25 22:34:32,453 [wrapper] Pilot exit status: 0
[2025-11-25 17:34:32] 2025-11-25 22:34:32,470 [wrapper] pandaids: 6895559432
[2025-11-25 17:34:32] 2025-11-25 22:34:32,523 [wrapper] cleanup supervisor_pilot  4491 13794
[2025-11-25 17:34:32] 2025-11-25 22:34:32,528 [wrapper] Test setup, not cleaning
[2025-11-25 17:34:32] 2025-11-25 22:34:32,533 [wrapper] apfmon messages muted
[2025-11-25 17:34:32] 2025-11-25 22:34:32,539 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:34:32] 2025-11-25 22:34:32,543 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:34:32]  *** Error codes and diagnostics ***
[2025-11-25 17:34:32]     "exeErrorCode": 0,
[2025-11-25 17:34:32]     "exeErrorDiag": "",
[2025-11-25 17:34:32]     "pilotErrorCode": 0,
[2025-11-25 17:34:32]     "pilotErrorDiag": "",
[2025-11-25 17:34:32]  *** Listing of results directory ***
[2025-11-25 17:34:32] total 1315416
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-25 17:34:32] -rwx------ 1 boincer umatlas     36292 Nov 24 05:31 runpilot2-wrapper.sh
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 05:31 queuedata.json
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas       100 Nov 25 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:34:32] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 05:09 run_atlas
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas       105 Nov 25 05:09 job.xml
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas 408430661 Nov 25 05:09 EVNT.47483658._001305.pool.root.1
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:09 start_atlas.sh
[2025-11-25 17:34:32] drwxrwx--x 2 boincer umatlas      4096 Nov 25 05:09 shared
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 05:09 input.tar.gz
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas         0 Nov 25 05:09 boinc_lockfile
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 05:09 pandaJob.out
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas        57 Nov 25 05:09 setup.sh.local
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas    991894 Nov 25 05:10 agis_schedconf.cvmfs.json
[2025-11-25 17:34:32] drwx------ 5 boincer umatlas      4096 Nov 25 05:10 pilot3
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas       532 Nov 25 17:24 boinc_task_state.xml
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 17:30 init_data.xml
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas 918362167 Nov 25 17:32 HITS.47556149._002919.pool.root.1
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas      1062 Nov 25 17:33 memory_monitor_summary.json
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas        95 Nov 25 17:33 pilot_heartbeat.json
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas   1516240 Nov 25 17:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas   1979621 Nov 25 17:33 log.47556149._002919.job.log.tgz.1
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas      8661 Nov 25 17:33 heartbeat.json
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas        29 Nov 25 17:34 wrapper_checkpoint.txt
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 17:34 boinc_mmap_file
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas      4818 Nov 25 17:34 pilotlog.txt
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas   6156653 Nov 25 17:34 log.47556149._002919.job.log.1
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas       353 Nov 25 17:34 output.list
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas       620 Nov 25 17:34 runtime_log
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas   8151040 Nov 25 17:34 result.tar.gz
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas       668 Nov 25 17:34 uopMDmw1ih8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmobLKDm6toc9m.diag
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 17:34 runtime_log.err
[2025-11-25 17:34:32] -rw-r--r-- 1 boincer umatlas     21287 Nov 25 17:34 stderr.txt
[2025-11-25 17:34:32] HITS file was successfully produced:
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas 918362167 Nov 25 17:32 shared/HITS.pool.root.1
[2025-11-25 17:34:32]  *** Contents of shared directory: ***
[2025-11-25 17:34:32] total 1304264
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas 408430661 Nov 25 05:09 ATLAS.root_0
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 05:09 start_atlas.sh
[2025-11-25 17:34:32] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 05:09 input.tar.gz
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas 918362167 Nov 25 17:32 HITS.pool.root.1
[2025-11-25 17:34:32] -rw------- 1 boincer umatlas   8151040 Nov 25 17:34 result.tar.gz
17:34:34 (9997): run_atlas exited; CPU time 344034.105949
17:34:34 (9997): called boinc_finish(0)

</stderr_txt>
]]>

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