Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:40:48 (25409): wrapper (7.7.26015): starting
04:40:48 (25409): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:40:48] Arguments: --nthreads 8
[2025-11-25 04:40:48] Threads: 8
[2025-11-25 04:40:48] Checking for CVMFS
[2025-11-25 04:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:40:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:40:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:40:48] 2.11.2.0 28705 116235 142584 153277 1 82 10169462 18432000 943 130560 0 84979578 99.974 4956530 32037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 04:40:48] CVMFS is ok
[2025-11-25 04:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:40:48] Further information can be found at the LHC@home message board.
[2025-11-25 04:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:40:48] Checking for apptainer binary...
[2025-11-25 04:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:40:48] Running /usr/bin/apptainer --version
[2025-11-25 04:40:48] apptainer version 1.3.2-1.el7
[2025-11-25 04:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:40:49] c-206-27.aglt2.org
[2025-11-25 04:40:49] apptainer works
[2025-11-25 04:40:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:40:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:40:49] Starting ATLAS job with PandaID=6895559636
[2025-11-25 04:40:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:36:09]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:36:09] 2025-11-26 04:35:35,133 | INFO     | monitor loop #4865: job 0:6895559636 is in state 'finished'
[2025-11-25 23:36:09] 2025-11-26 04:35:35,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,042 | INFO     | time since job start (68076s) is within the limit (172800.0s)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,561 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 23:36:09] 2025-11-26 04:35:36,565 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2178.375
[2025-11-25 23:36:09] 2025-11-26 04:35:36,568 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895559636/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,569 | INFO     | extracted standard info from prmon json
[2025-11-25 23:36:09] 2025-11-26 04:35:36,569 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:36:09] 2025-11-26 04:35:36,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:36:09] 2025-11-26 04:35:36,585 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:36:09] 2025-11-26 04:35:36,586 | INFO     | sum of square deviations: 430992283258.5689
[2025-11-25 23:36:09] 2025-11-26 04:35:36,610 | INFO     | sum of deviations: 2159138204990.9956
[2025-11-25 23:36:09] 2025-11-26 04:35:36,611 | INFO     | mean x: 1764097694.0869176
[2025-11-25 23:36:09] 2025-11-26 04:35:36,611 | INFO     | mean y: 2865269.896953405
[2025-11-25 23:36:09] 2025-11-26 04:35:36,611 | INFO     | intersect: -8834719245.170704
[2025-11-25 23:36:09] 2025-11-26 04:35:36,612 | INFO     | chi2: 5.145432001730275
[2025-11-25 23:36:09] 2025-11-26 04:35:36,613 | INFO     | sum of square deviations: 425225472576.8385
[2025-11-25 23:36:09] 2025-11-26 04:35:36,637 | INFO     | sum of deviations: 2470127549092.2974
[2025-11-25 23:36:09] 2025-11-26 04:35:36,637 | INFO     | mean x: 1764097541.5895588
[2025-11-25 23:36:09] 2025-11-26 04:35:36,637 | INFO     | mean y: 2873487.3537353734
[2025-11-25 23:36:09] 2025-11-26 04:35:36,638 | INFO     | intersect: -10244739174.135996
[2025-11-25 23:36:09] 2025-11-26 04:35:36,639 | INFO     | chi2: 2.74025717979046
[2025-11-25 23:36:09] 2025-11-26 04:35:36,639 | INFO     | current chi2=2.74025717979046 (change=46.74388508352685 %)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,640 | INFO     | sum of square deviations: 419510337282.5957
[2025-11-25 23:36:09] 2025-11-26 04:35:36,664 | INFO     | sum of deviations: 2600260472018.6763
[2025-11-25 23:36:09] 2025-11-26 04:35:36,664 | INFO     | mean x: 1764097389.0922241
[2025-11-25 23:36:09] 2025-11-26 04:35:36,664 | INFO     | mean y: 2876955.8462929474
[2025-11-25 23:36:09] 2025-11-26 04:35:36,664 | INFO     | intersect: -10931568043.438276
[2025-11-25 23:36:09] 2025-11-26 04:35:36,665 | INFO     | chi2: 2.1781113215649386
[2025-11-25 23:36:09] 2025-11-26 04:35:36,665 | INFO     | current chi2=2.1781113215649386 (change=20.514346696046506 %)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,665 | INFO     | right removable region: 1105
[2025-11-25 23:36:09] 2025-11-26 04:35:36,667 | INFO     | sum of square deviations: 425225140859.0167
[2025-11-25 23:36:09] 2025-11-26 04:35:36,690 | INFO     | sum of deviations: 1895806281385.8398
[2025-11-25 23:36:09] 2025-11-26 04:35:36,691 | INFO     | mean x: 1764097846.5886588
[2025-11-25 23:36:09] 2025-11-26 04:35:36,691 | INFO     | mean y: 2872223.463546355
[2025-11-25 23:36:09] 2025-11-26 04:35:36,691 | INFO     | intersect: -7862109070.412594
[2025-11-25 23:36:09] 2025-11-26 04:35:36,692 | INFO     | chi2: 3.3207397467271393
[2025-11-25 23:36:09] 2025-11-26 04:35:36,692 | INFO     | current chi2=3.3207397467271393 (change=35.462372340933456 %)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,693 | INFO     | sum of square deviations: 419509673846.95544
[2025-11-25 23:36:09] 2025-11-26 04:35:36,717 | INFO     | sum of deviations: 1811242589194.5935
[2025-11-25 23:36:09] 2025-11-26 04:35:36,717 | INFO     | mean x: 1764097999.090416
[2025-11-25 23:36:09] 2025-11-26 04:35:36,717 | INFO     | mean y: 2874479.424050633
[2025-11-25 23:36:09] 2025-11-26 04:35:36,717 | INFO     | intersect: -7613658884.789132
[2025-11-25 23:36:09] 2025-11-26 04:35:36,718 | INFO     | chi2: 3.244101861250875
[2025-11-25 23:36:09] 2025-11-26 04:35:36,718 | INFO     | current chi2=3.244101861250875 (change=2.3078558189270044 %)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,718 | INFO     | left removable region: 20
[2025-11-25 23:36:09] 2025-11-26 04:35:36,720 | INFO     | sum of square deviations: 396064954123.75446
[2025-11-25 23:36:09] 2025-11-26 04:35:36,742 | INFO     | sum of deviations: 2131892735351.8157
[2025-11-25 23:36:09] 2025-11-26 04:35:36,742 | INFO     | mean x: 1764097968.5935483
[2025-11-25 23:36:09] 2025-11-26 04:35:36,743 | INFO     | mean y: 2889744.4304147465
[2025-11-25 23:36:09] 2025-11-26 04:35:36,743 | INFO     | intersect: -9492693251.580791
[2025-11-25 23:36:09] 2025-11-26 04:35:36,744 | INFO     | chi2: 0.2174774118299616
[2025-11-25 23:36:09] 2025-11-26 04:35:36,744 | INFO     | current memory leak: 5.38 B/s (using 1085 data points, chi2=0.22)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | could have reported an average CPU frequency of 2594 MHz (41 samples)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | ..............................
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . Timing measurements:
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . get job = 0 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . initial setup = 2 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . payload setup = 5 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . stage-in = 0 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,745 | INFO     | . payload execution = 68040 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,746 | INFO     | . stage-out = 3 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,746 | INFO     | . log creation = 0 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,746 | INFO     | ..............................
[2025-11-25 23:36:09] 2025-11-26 04:35:36,826 | INFO     | 
[2025-11-25 23:36:09] 2025-11-26 04:35:36,826 | INFO     | job summary report
[2025-11-25 23:36:09] 2025-11-26 04:35:36,826 | INFO     | --------------------------------------------------
[2025-11-25 23:36:09] 2025-11-26 04:35:36,826 | INFO     | PanDA job id: 6895559636
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | task id: 47556161
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | errors: (none)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | pilot state: finished 
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | transexitcode: 0
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | exeerrorcode: 0
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | exeerrordiag: 
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | exitcode: 0
[2025-11-25 23:36:09] 2025-11-26 04:35:36,827 | INFO     | exitmsg: OK
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | cpuconsumptiontime: 531282 s
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | nevents: 1000
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | neventsw: 0
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | pid: 13195
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | pgrp: 13195
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | corecount: 8
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | event service: False
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | sizes: {0: 2284312, 1: 2284340, 4: 2284602, 11: 2284630, 68050: 2340411, 68054: 2349405, 68057: 2349589, 68061: 2349931}
[2025-11-25 23:36:09] 2025-11-26 04:35:36,828 | INFO     | --------------------------------------------------
[2025-11-25 23:36:09] 2025-11-26 04:35:36,829 | INFO     | 
[2025-11-25 23:36:09] 2025-11-26 04:35:36,829 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 23:36:09] 2025-11-26 04:35:36,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:36:09] 2025-11-26 04:35:36,847 | INFO     | job 6895559636 has completed (purged errors)
[2025-11-25 23:36:09] 2025-11-26 04:35:36,847 | INFO     | overall cleanup function is called
[2025-11-25 23:36:09] 2025-11-26 04:35:37,860 | INFO     | --- collectZombieJob: --- 10, [13195]
[2025-11-25 23:36:09] 2025-11-26 04:35:37,860 | INFO     | zombie collector waiting for pid 13195
[2025-11-25 23:36:09] 2025-11-26 04:35:37,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:36:09] 2025-11-26 04:35:37,860 | INFO     | collected zombie processes
[2025-11-25 23:36:09] 2025-11-26 04:35:37,860 | INFO     | will attempt to kill all subprocesses of pid=13195
[2025-11-25 23:36:09] 2025-11-26 04:35:37,987 | INFO     | process IDs to be killed: [13195] (in reverse order)
[2025-11-25 23:36:09] 2025-11-26 04:35:38,037 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:36:09] 2025-11-26 04:35:38,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:36:09] 2025-11-26 04:35:38,040 | INFO     | did not find any defunct processes belonging to 13195
[2025-11-25 23:36:09] 2025-11-26 04:35:38,043 | INFO     | did not find any defunct processes belonging to 13195
[2025-11-25 23:36:09] 2025-11-26 04:35:38,044 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:36:09] 2025-11-26 04:35:38,044 | INFO     | ready for new job
[2025-11-25 23:36:09] 2025-11-26 04:35:38,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:36:09] 2025-11-26 04:35:38,048 | INFO     | ***************************************
[2025-11-25 23:36:09] 2025-11-26 04:35:38,049 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:36:09] 2025-11-26 04:35:38,049 | INFO     | ***************************************
[2025-11-25 23:36:09] 2025-11-26 04:35:38,049 | INFO     | 
[2025-11-25 23:36:09] 2025-11-26 04:35:38,050 | INFO     | architecture information:
[2025-11-25 23:36:09] 2025-11-26 04:35:38,050 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:36:09] 2025-11-26 04:35:38,061 | INFO     | cat /etc/os-release:
[2025-11-25 23:36:09] NAME="CentOS Linux"
[2025-11-25 23:36:09] VERSION="7 (Core)"
[2025-11-25 23:36:09] ID="centos"
[2025-11-25 23:36:09] ID_LIKE="rhel fedora"
[2025-11-25 23:36:09] VERSION_ID="7"
[2025-11-25 23:36:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:36:09] ANSI_COLOR="0;31"
[2025-11-25 23:36:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:36:09] HOME_URL="https://www.centos.org/"
[2025-11-25 23:36:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:36:09] 
[2025-11-25 23:36:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:36:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:36:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:36:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:36:09] 
[2025-11-25 23:36:09] 2025-11-26 04:35:38,061 | INFO     | ***************************************
[2025-11-25 23:36:09] 2025-11-26 04:35:38,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 23:36:09] 2025-11-26 04:35:38,579 | INFO     | sufficient remaining disk space (24880611328 B)
[2025-11-25 23:36:09] 2025-11-26 04:35:38,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:36:09] 2025-11-26 04:35:38,579 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:36:09] 2025-11-26 04:35:38,579 | INFO     | update_server=False
[2025-11-25 23:36:09] 2025-11-26 04:35:38,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:36:09] 2025-11-26 04:35:38,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:36:09] 2025-11-26 04:35:38,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:36:09] 2025-11-26 04:35:38,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:36:09] 2025-11-26 04:35:38,641 | INFO     | aborting loop
[2025-11-25 23:36:09] 2025-11-26 04:35:38,843 | INFO     | all payload control threads have been joined
[2025-11-25 23:36:09] 2025-11-26 04:35:39,070 | INFO     | all job control threads have been joined
[2025-11-25 23:36:09] 2025-11-26 04:35:39,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:36:09] 2025-11-26 04:35:39,270 | INFO     | all data control threads have been joined
[2025-11-25 23:36:09] 2025-11-26 04:35:39,585 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,586 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,647 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,764 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,774 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,846 | INFO     | [payload] control thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:39,921 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,075 | INFO     | [job] control thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,276 | INFO     | [data] control thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,586 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,596 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,830 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:40,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:41,034 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:41,043 | INFO     | [job] validate thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:43,117 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:36:09] 2025-11-26 04:35:53,126 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:36:09] 2025-11-26 04:35:54,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659969587008)>', '<ExcThread(monitor, started 139659149555456)>']
[2025-11-25 23:36:09] 2025-11-26 04:35:59,262 | INFO     | all workflow threads have been joined
[2025-11-25 23:36:09] 2025-11-26 04:35:59,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:36:09] 2025-11-26 04:35:59,262 | INFO     | traces error code: 0
[2025-11-25 23:36:09] 2025-11-26 04:35:59,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:36:09] 2025-11-26 04:36:09,303 | INFO     | PID=31858 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:36:09] 2025-11-26 04:36:09,303 | INFO     | .. there are 2 such processes running
[2025-11-25 23:36:09] 2025-11-26 04:36:09,304 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:36:09] 2025-11-26 04:36:09,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:36:09] 2025-11-26 04:36:09,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:36:09] 2025-11-26 04:36:09,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:36:09] 2025-11-26 04:36:09,305 | INFO     | [monitor] control thread has ended
[2025-11-25 23:36:09] 2025-11-26 04:36:09,399 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:36:09] 2025-11-26 04:36:09,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:36:09] 2025-11-26 04:36:09,404 [wrapper] pilotpid: 31858
[2025-11-25 23:36:09] 2025-11-26 04:36:09,406 [wrapper] Pilot exit status: 0
[2025-11-25 23:36:09] 2025-11-26 04:36:09,413 [wrapper] pandaids: 6895559636
[2025-11-25 23:36:09] 2025-11-26 04:36:09,441 [wrapper] cleanup supervisor_pilot 21335 31859
[2025-11-25 23:36:09] 2025-11-26 04:36:09,443 [wrapper] Test setup, not cleaning
[2025-11-25 23:36:09] 2025-11-26 04:36:09,445 [wrapper] apfmon messages muted
[2025-11-25 23:36:09] 2025-11-26 04:36:09,448 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:36:09] 2025-11-26 04:36:09,450 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:36:09]  *** Error codes and diagnostics ***
[2025-11-25 23:36:09]     "exeErrorCode": 0,
[2025-11-25 23:36:09]     "exeErrorDiag": "",
[2025-11-25 23:36:09]     "pilotErrorCode": 0,
[2025-11-25 23:36:09]     "pilotErrorDiag": "",
[2025-11-25 23:36:09]  *** Listing of results directory ***
[2025-11-25 23:36:09] total 1323408
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 05:42 queuedata.json
[2025-11-25 23:36:09] -rwx------ 1 boincer umatlas     36292 Nov 24 05:46 runpilot2-wrapper.sh
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas       100 Nov 25 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:36:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 04:40 run_atlas
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas       105 Nov 25 04:40 job.xml
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas 408819109 Nov 25 04:40 EVNT.47483658._002035.pool.root.1
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 04:40 start_atlas.sh
[2025-11-25 23:36:09] drwxrwx--x 2 boincer umatlas      4096 Nov 25 04:40 shared
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 04:40 input.tar.gz
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas         0 Nov 25 04:40 boinc_lockfile
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 04:40 pandaJob.out
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas        57 Nov 25 04:40 setup.sh.local
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas    991894 Nov 25 04:40 agis_schedconf.cvmfs.json
[2025-11-25 23:36:09] drwx------ 5 boincer umatlas      4096 Nov 25 04:41 pilot3
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas       533 Nov 25 23:23 boinc_task_state.xml
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 23:28 init_data.xml
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas 919014791 Nov 25 23:34 HITS.47556161._000184.pool.root.1
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas      1061 Nov 25 23:35 memory_monitor_summary.json
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas   1516240 Nov 25 23:35 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas   2281531 Nov 25 23:35 log.47556161._000184.job.log.tgz.1
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas      8657 Nov 25 23:35 heartbeat.json
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:35 wrapper_checkpoint.txt
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:35 boinc_mmap_file
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas        95 Nov 25 23:36 pilot_heartbeat.json
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas       820 Nov 25 23:36 pilotlog.txt
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas   9426332 Nov 25 23:36 log.47556161._000184.job.log.1
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas       353 Nov 25 23:36 output.list
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:36 runtime_log
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas  11724800 Nov 25 23:36 result.tar.gz
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 23:36 runtime_log.err
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas       668 Nov 25 23:36 ETHNDm6Gjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHcLKDm9JhhXm.diag
[2025-11-25 23:36:09] -rw-r--r-- 1 boincer umatlas     21302 Nov 25 23:36 stderr.txt
[2025-11-25 23:36:09] HITS file was successfully produced:
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas 919014791 Nov 25 23:34 shared/HITS.pool.root.1
[2025-11-25 23:36:09]  *** Contents of shared directory: ***
[2025-11-25 23:36:09] total 1308772
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas 408819109 Nov 25 04:40 ATLAS.root_0
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 04:40 start_atlas.sh
[2025-11-25 23:36:09] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 04:40 input.tar.gz
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas 919014791 Nov 25 23:34 HITS.pool.root.1
[2025-11-25 23:36:09] -rw------- 1 boincer umatlas  11724800 Nov 25 23:36 result.tar.gz
23:36:11 (25409): run_atlas exited; CPU time 530856.132235
23:36:11 (25409): called boinc_finish(0)

</stderr_txt>
]]>

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