Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:57 (3262802): wrapper (7.7.26015): starting
06:04:57 (3262802): wrapper: running run_atlas (--nthreads 6)
[2025-11-26 06:04:57] Arguments: --nthreads 6
[2025-11-26 06:04:57] Threads: 6
[2025-11-26 06:04:57] Checking for CVMFS
[2025-11-26 06:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:04:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:04:57] 2.13.3.0 3071455 430 66480 153297 2 89 43370568 52428800 1139 130560 0 676727 99.990 24079 22 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 06:04:57] CVMFS is ok
[2025-11-26 06:04:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:04:57] Checking for apptainer binary...
[2025-11-26 06:04:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:04:57] Running /usr/bin/apptainer --version
[2025-11-26 06:04:57] apptainer version 1.4.4-1.el9
[2025-11-26 06:04:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:04:57] testio008
[2025-11-26 06:04:57] apptainer works
[2025-11-26 06:04:57] Set ATHENA_PROC_NUMBER=6
[2025-11-26 06:04:57] Set ATHENA_CORE_NUMBER=6
[2025-11-26 06:04:57] Starting ATLAS job with PandaID=6895559856
[2025-11-26 06:04:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:16:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:16:53] 2025-11-26 04:16:37,026 | INFO     | extracted standard info from prmon json
[2025-11-26 13:16:53] 2025-11-26 04:16:37,026 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:16:53] 2025-11-26 04:16:37,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:16:53] 2025-11-26 04:16:37,028 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:16:53] 2025-11-26 04:16:37,028 | INFO     | sum of square deviations: 23635910617.848972
[2025-11-26 13:16:53] 2025-11-26 04:16:37,029 | INFO     | sum of deviations: 439108739352.15967
[2025-11-26 13:16:53] 2025-11-26 04:16:37,029 | INFO     | mean x: 1764117621.518868
[2025-11-26 13:16:53] 2025-11-26 04:16:37,029 | INFO     | mean y: 2593760.9174528304
[2025-11-26 13:16:53] 2025-11-26 04:16:37,029 | INFO     | intersect: -32771242516.37415
[2025-11-26 13:16:53] 2025-11-26 04:16:37,030 | INFO     | chi2: 6.9160049304379285
[2025-11-26 13:16:53] 2025-11-26 04:16:37,030 | INFO     | sum of square deviations: 22809553377.84732
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | sum of deviations: 548309112947.4556
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | mean x: 1764117469.019093
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | mean y: 2613887.568019093
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | intersect: -42404252592.87764
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | chi2: 4.402117580215375
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | current chi2=4.402117580215375 (change=36.34883687197388 %)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,031 | INFO     | sum of square deviations: 22002684875.345398
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | sum of deviations: 540586081535.59894
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | mean x: 1764117316.5193236
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | mean y: 2612418.425120773
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | intersect: -43340155653.25125
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | chi2: 4.375885840871707
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | current chi2=4.375885840871707 (change=0.5958891116757673 %)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,032 | INFO     | right removable region: 413
[2025-11-26 13:16:53] 2025-11-26 04:16:37,033 | INFO     | sum of square deviations: 22809548497.84732
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | sum of deviations: 311885127979.80676
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | mean x: 1764117774.019093
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | mean y: 2617221.6491646776
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | intersect: -24118951768.343014
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | chi2: 4.043354373725188
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | current chi2=4.043354373725188 (change=41.53627109301152 %)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,034 | INFO     | sum of square deviations: 22002675115.345398
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | sum of deviations: 223956185300.92004
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | mean x: 1764117926.5193236
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | mean y: 2633807.572463768
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | intersect: -17953597385.819607
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | chi2: 2.649406095575129
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | current chi2=2.649406095575129 (change=34.475045947204435 %)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,035 | INFO     | sum of square deviations: 21215057907.843708
[2025-11-26 13:16:53] 2025-11-26 04:16:37,036 | INFO     | sum of deviations: 203586397998.6822
[2025-11-26 13:16:53] 2025-11-26 04:16:37,036 | INFO     | mean x: 1764118079.0195599
[2025-11-26 13:16:53] 2025-11-26 04:16:37,036 | INFO     | mean y: 2637748.7897310513
[2025-11-26 13:16:53] 2025-11-26 04:16:37,037 | INFO     | intersect: -16926396662.149132
[2025-11-26 13:16:53] 2025-11-26 04:16:37,037 | INFO     | chi2: 2.626384872762788
[2025-11-26 13:16:53] 2025-11-26 04:16:37,037 | INFO     | current chi2=2.626384872762788 (change=0.8689201270726135 %)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,037 | INFO     | left removable region: 30
[2025-11-26 13:16:53] 2025-11-26 04:16:37,037 | INFO     | sum of square deviations: 17420871327.832825
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | sum of deviations: 258335029994.3812
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | mean x: 1764118201.0208876
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | mean y: 2667834.7023498695
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | intersect: -26157535050.57196
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | chi2: 0.01214917761568665
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | current memory leak: 14.83 B/s (using 383 data points, chi2=0.01)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | could have reported an average CPU frequency of 3519 MHz (17 samples)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | ..............................
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . Timing measurements:
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . get job = 0 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . initial setup = 3 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . payload setup = 1 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . stage-in = 0 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . payload execution = 25864 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . stage-out = 5 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | . log creation = 0 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,038 | INFO     | ..............................
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | 
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | job summary report
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | --------------------------------------------------
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | PanDA job id: 6895559856
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | task id: 47556149
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | errors: (none)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | pilot state: finished 
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | transexitcode: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | exeerrorcode: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | exeerrordiag: 
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | exitcode: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | exitmsg: OK
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | cpuconsumptiontime: 148236 s
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | nevents: 1000
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | neventsw: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | pid: 3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | pgrp: 3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | corecount: 6
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | event service: False
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | sizes: {0: 2284087, 1: 2284172, 2: 2284548, 11: 2284576, 25870: 2321413, 25875: 2330407, 25877: 2330591, 25881: 2330901}
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | --------------------------------------------------
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | 
[2025-11-26 13:16:53] 2025-11-26 04:16:37,060 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | job 6895559856 has completed (purged errors)
[2025-11-26 13:16:53] 2025-11-26 04:16:37,067 | INFO     | overall cleanup function is called
[2025-11-26 13:16:53] 2025-11-26 04:16:38,075 | INFO     | --- collectZombieJob: --- 10, [3273398]
[2025-11-26 13:16:53] 2025-11-26 04:16:38,075 | INFO     | zombie collector waiting for pid 3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:38,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:16:53] 2025-11-26 04:16:38,075 | INFO     | collected zombie processes
[2025-11-26 13:16:53] 2025-11-26 04:16:38,075 | INFO     | will attempt to kill all subprocesses of pid=3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:38,094 | INFO     | process IDs to be killed: [3273398] (in reverse order)
[2025-11-26 13:16:53] 2025-11-26 04:16:38,106 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:16:53] 2025-11-26 04:16:38,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:16:53] 2025-11-26 04:16:38,107 | INFO     | did not find any defunct processes belonging to 3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:38,108 | INFO     | did not find any defunct processes belonging to 3273398
[2025-11-26 13:16:53] 2025-11-26 04:16:38,108 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:16:53] 2025-11-26 04:16:38,108 | INFO     | ready for new job
[2025-11-26 13:16:53] 2025-11-26 04:16:38,108 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | ***************************************
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | ***************************************
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | 
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | architecture information:
[2025-11-26 13:16:53] 2025-11-26 04:16:38,109 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:16:53] 2025-11-26 04:16:38,113 | INFO     | cat /etc/os-release:
[2025-11-26 13:16:53] NAME="CentOS Linux"
[2025-11-26 13:16:53] VERSION="7 (Core)"
[2025-11-26 13:16:53] ID="centos"
[2025-11-26 13:16:53] ID_LIKE="rhel fedora"
[2025-11-26 13:16:53] VERSION_ID="7"
[2025-11-26 13:16:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:16:53] ANSI_COLOR="0;31"
[2025-11-26 13:16:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:16:53] HOME_URL="https://www.centos.org/"
[2025-11-26 13:16:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:16:53] 
[2025-11-26 13:16:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:16:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:16:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:16:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:16:53] 
[2025-11-26 13:16:53] 2025-11-26 04:16:38,113 | INFO     | ***************************************
[2025-11-26 13:16:53] 2025-11-26 04:16:38,615 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | INFO     | sufficient remaining disk space (288462209024 B)
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | INFO     | update_server=False
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:16:53] 2025-11-26 04:16:38,621 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 13:16:53] 2025-11-26 04:16:38,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:16:53] 2025-11-26 04:16:38,622 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:16:53] 2025-11-26 04:16:38,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:16:53] 2025-11-26 04:16:38,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:16:53] 2025-11-26 04:16:38,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:16:53] 2025-11-26 04:16:38,810 | INFO     | aborting loop
[2025-11-26 13:16:53] 2025-11-26 04:16:38,811 | INFO     | all job control threads have been joined
[2025-11-26 13:16:53] 2025-11-26 04:16:38,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:16:53] 2025-11-26 04:16:39,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:16:53] 2025-11-26 04:16:39,089 | INFO     | all data control threads have been joined
[2025-11-26 13:16:53] 2025-11-26 04:16:39,623 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,627 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,647 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,675 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,714 | INFO     | all payload control threads have been joined
[2025-11-26 13:16:53] 2025-11-26 04:16:39,731 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,811 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,817 | INFO     | [job] control thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:39,921 | INFO     | [job] validate thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,094 | INFO     | [data] control thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,720 | INFO     | [payload] control thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,901 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,931 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:40,943 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:41,067 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:42,878 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:16:53] 2025-11-26 04:16:47,171 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:16:53] 2025-11-26 04:16:47,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742027769664)>', '<ExcThread(monitor, started 139741676672768)>']
[2025-11-26 13:16:53] 2025-11-26 04:16:48,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:16:53] 2025-11-26 04:16:48,669 | INFO     | [monitor] control thread has ended
[2025-11-26 13:16:53] 2025-11-26 04:16:52,954 | INFO     | all workflow threads have been joined
[2025-11-26 13:16:53] 2025-11-26 04:16:52,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:16:53] 2025-11-26 04:16:52,954 | INFO     | traces error code: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:52,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:16:53] 2025-11-26 04:16:53,008 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:16:53] 2025-11-26 04:16:53,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:16:53] 2025-11-26 04:16:53,010 [wrapper] pilotpid: 3266629
[2025-11-26 13:16:53] 2025-11-26 04:16:53,012 [wrapper] Pilot exit status: 0
[2025-11-26 13:16:53] 2025-11-26 04:16:53,015 [wrapper] pandaids: 6895559856
[2025-11-26 13:16:53] 2025-11-26 04:16:53,027 [wrapper] cleanup supervisor_pilot 3377091 3266630
[2025-11-26 13:16:53] 2025-11-26 04:16:53,028 [wrapper] Test setup, not cleaning
[2025-11-26 13:16:53] 2025-11-26 04:16:53,029 [wrapper] apfmon messages muted
[2025-11-26 13:16:53] 2025-11-26 04:16:53,031 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:16:53] 2025-11-26 04:16:53,032 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:16:53]  *** Error codes and diagnostics ***
[2025-11-26 13:16:53]     "exeErrorCode": 0,
[2025-11-26 13:16:53]     "exeErrorDiag": "",
[2025-11-26 13:16:53]     "pilotErrorCode": 0,
[2025-11-26 13:16:53]     "pilotErrorDiag": "",
[2025-11-26 13:16:53]  *** Listing of results directory ***
[2025-11-26 13:16:53] total 1319156
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc    576529 Nov 24 19:13 pilot3.tar.gz
[2025-11-26 13:16:53] -rwx------. 1 boinc boinc     36292 Nov 24 19:55 runpilot2-wrapper.sh
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc      5112 Nov 24 19:55 queuedata.json
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc       100 Nov 26 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:16:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 06:04 run_atlas
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc       105 Nov 26 06:04 job.xml
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc     15847 Nov 26 06:04 start_atlas.sh
[2025-11-26 13:16:53] drwxrwx--x. 2 boinc boinc        68 Nov 26 06:04 shared
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc    590104 Nov 26 06:04 input.tar.gz
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc 412801464 Nov 26 06:04 EVNT.47483658._001317.pool.root.1
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc         0 Nov 26 06:04 boinc_lockfile
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc      2782 Nov 26 06:04 pandaJob.out
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc    991893 Nov 26 06:05 agis_schedconf.cvmfs.json
[2025-11-26 13:16:53] drwx------. 5 boinc boinc      4096 Nov 26 06:05 pilot3
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc      9522 Nov 26 07:05 init_data.xml
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc       533 Nov 26 13:09 boinc_task_state.xml
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc 923838077 Nov 26 13:16 HITS.47556149._003031.pool.root.1
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc        95 Nov 26 13:16 pilot_heartbeat.json
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc      1031 Nov 26 13:16 memory_monitor_summary.json
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc   1516240 Nov 26 13:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc        29 Nov 26 13:16 wrapper_checkpoint.txt
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc      8192 Nov 26 13:16 boinc_mmap_file
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc   1475221 Nov 26 13:16 log.47556149._003031.job.log.tgz.1
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc      8575 Nov 26 13:16 heartbeat.json
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc      4553 Nov 26 13:16 pilotlog.txt
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc   3659920 Nov 26 13:16 log.47556149._003031.job.log.1
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc       353 Nov 26 13:16 output.list
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc       620 Nov 26 13:16 runtime_log
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc   5150720 Nov 26 13:16 result.tar.gz
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc       650 Nov 26 13:16 YTGNDmqPjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmq1IKDmXsUyPn.diag
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc      8776 Nov 26 13:16 runtime_log.err
[2025-11-26 13:16:53] -rw-r--r--. 1 boinc boinc     20733 Nov 26 13:16 stderr.txt
[2025-11-26 13:16:53] HITS file was successfully produced:
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc 923838077 Nov 26 13:16 shared/HITS.pool.root.1
[2025-11-26 13:16:53]  *** Contents of shared directory: ***
[2025-11-26 13:16:53] total 1310944
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc     15847 Nov 26 06:04 start_atlas.sh
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc    590104 Nov 26 06:04 input.tar.gz
[2025-11-26 13:16:53] -rw-r--r--. 2 boinc boinc 412801464 Nov 26 06:04 ATLAS.root_0
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc 923838077 Nov 26 13:16 HITS.pool.root.1
[2025-11-26 13:16:53] -rw-------. 1 boinc boinc   5150720 Nov 26 13:16 result.tar.gz
13:16:54 (3262802): run_atlas exited; CPU time 148300.886661
13:16:54 (3262802): called boinc_finish(0)

</stderr_txt>
]]>

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