Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:57:13 (1513877): wrapper (7.7.26015): starting
06:57:13 (1513877): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 06:57:13] Arguments: --nthreads 9
[2025-11-25 06:57:13] Threads: 9
[2025-11-25 06:57:13] Checking for CVMFS
[2025-11-25 06:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:57:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:57:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:57:13] 2.13.3.0 3025293 7481 98148 153281 0 81 15936857 37030912 1932 16776704 0 8256075 99.930 725754 17143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:57:13] CVMFS is ok
[2025-11-25 06:57:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:57:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:57:13] Further information can be found at the LHC@home message board.
[2025-11-25 06:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:57:13] Checking for apptainer binary...
[2025-11-25 06:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:57:13] Running /usr/bin/apptainer --version
[2025-11-25 06:57:13] apptainer version 1.4.4-1.el9
[2025-11-25 06:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:57:13] c-205-37.aglt2.org
[2025-11-25 06:57:13] apptainer works
[2025-11-25 06:57:13] Set ATHENA_PROC_NUMBER=9
[2025-11-25 06:57:13] Set ATHENA_CORE_NUMBER=9
[2025-11-25 06:57:13] Starting ATLAS job with PandaID=6895374018
[2025-11-25 06:57:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:40:18]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:40:18] 2025-11-25 20:39:28,085 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2674.8641875000003
[2025-11-25 15:40:18] 2025-11-25 20:39:28,092 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895374018/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,092 | INFO     | extracted standard info from prmon json
[2025-11-25 15:40:18] 2025-11-25 20:39:28,093 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:40:18] 2025-11-25 20:39:28,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:40:18] 2025-11-25 20:39:28,102 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:40:18] 2025-11-25 20:39:28,103 | INFO     | sum of square deviations: 41862577257.22027
[2025-11-25 15:40:18] 2025-11-25 20:39:28,110 | INFO     | sum of deviations: 550337569372.551
[2025-11-25 15:40:18] 2025-11-25 20:39:28,110 | INFO     | mean x: 1764087484.0389864
[2025-11-25 15:40:18] 2025-11-25 20:39:28,111 | INFO     | mean y: 3101033.522417154
[2025-11-25 15:40:18] 2025-11-25 20:39:28,111 | INFO     | intersect: -23188104136.701736
[2025-11-25 15:40:18] 2025-11-25 20:39:28,112 | INFO     | chi2: 4.924030863818534
[2025-11-25 15:40:18] 2025-11-25 20:39:28,112 | INFO     | sum of square deviations: 40650411792.21246
[2025-11-25 15:40:18] 2025-11-25 20:39:28,120 | INFO     | sum of deviations: 720692358057.4677
[2025-11-25 15:40:18] 2025-11-25 20:39:28,120 | INFO     | mean x: 1764087331.53937
[2025-11-25 15:40:18] 2025-11-25 20:39:28,120 | INFO     | mean y: 3122455.651574803
[2025-11-25 15:40:18] 2025-11-25 20:39:28,120 | INFO     | intersect: -31272434241.906258
[2025-11-25 15:40:18] 2025-11-25 20:39:28,121 | INFO     | chi2: 2.091595638156642
[2025-11-25 15:40:18] 2025-11-25 20:39:28,121 | INFO     | current chi2=2.091595638156642 (change=57.52269439402677 %)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,122 | INFO     | sum of square deviations: 39461874677.204506
[2025-11-25 15:40:18] 2025-11-25 20:39:28,129 | INFO     | sum of deviations: 732768418821.9796
[2025-11-25 15:40:18] 2025-11-25 20:39:28,129 | INFO     | mean x: 1764087179.0397615
[2025-11-25 15:40:18] 2025-11-25 20:39:28,129 | INFO     | mean y: 3123987.500994036
[2025-11-25 15:40:18] 2025-11-25 20:39:28,130 | INFO     | intersect: -32754249640.15925
[2025-11-25 15:40:18] 2025-11-25 20:39:28,130 | INFO     | chi2: 1.9629094092203694
[2025-11-25 15:40:18] 2025-11-25 20:39:28,131 | INFO     | current chi2=1.9629094092203694 (change=6.152538597263761 %)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,131 | INFO     | right removable region: 502
[2025-11-25 15:40:18] 2025-11-25 20:39:28,131 | INFO     | sum of square deviations: 40650399592.21249
[2025-11-25 15:40:18] 2025-11-25 20:39:28,138 | INFO     | sum of deviations: 420400275320.7638
[2025-11-25 15:40:18] 2025-11-25 20:39:28,139 | INFO     | monitor loop #2327: job 0:6895374018 is in state 'finished'
[2025-11-25 15:40:18] 2025-11-25 20:39:28,139 | INFO     | mean x: 1764087636.53937
[2025-11-25 15:40:18] 2025-11-25 20:39:28,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,139 | INFO     | mean y: 3117328.5118110236
[2025-11-25 15:40:18] 2025-11-25 20:39:28,139 | INFO     | intersect: -18240809804.573036
[2025-11-25 15:40:18] 2025-11-25 20:39:28,140 | INFO     | chi2: 3.100787622788233
[2025-11-25 15:40:18] 2025-11-25 20:39:28,140 | INFO     | current chi2=3.100787622788233 (change=37.02745355288848 %)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,141 | INFO     | sum of square deviations: 39461850277.204506
[2025-11-25 15:40:18] 2025-11-25 20:39:28,148 | INFO     | sum of deviations: 389569554078.9283
[2025-11-25 15:40:18] 2025-11-25 20:39:28,148 | INFO     | mean x: 1764087789.0397615
[2025-11-25 15:40:18] 2025-11-25 20:39:28,149 | INFO     | mean y: 3121280.4035785287
[2025-11-25 15:40:18] 2025-11-25 20:39:28,149 | INFO     | intersect: -17412050296.82198
[2025-11-25 15:40:18] 2025-11-25 20:39:28,149 | INFO     | chi2: 3.0736582178593492
[2025-11-25 15:40:18] 2025-11-25 20:39:28,150 | INFO     | current chi2=3.0736582178593492 (change=0.8749198019724072 %)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,150 | INFO     | left removable region: 20
[2025-11-25 15:40:18] 2025-11-25 20:39:28,150 | INFO     | sum of square deviations: 34722773177.7513
[2025-11-25 15:40:18] 2025-11-25 20:39:28,157 | INFO     | sum of deviations: 533476561047.5268
[2025-11-25 15:40:18] 2025-11-25 20:39:28,157 | INFO     | mean x: 1764087758.5394192
[2025-11-25 15:40:18] 2025-11-25 20:39:28,157 | INFO     | mean y: 3149719.5248962655
[2025-11-25 15:40:18] 2025-11-25 20:39:28,157 | INFO     | intersect: -27100084978.752632
[2025-11-25 15:40:18] 2025-11-25 20:39:28,158 | INFO     | chi2: 0.08666161164855567
[2025-11-25 15:40:18] 2025-11-25 20:39:28,158 | INFO     | current memory leak: 15.36 B/s (using 482 data points, chi2=0.09)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,159 | INFO     | could have reported an average CPU frequency of 2624 MHz (21 samples)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,159 | INFO     | ..............................
[2025-11-25 15:40:18] 2025-11-25 20:39:28,159 | INFO     | . Timing measurements:
[2025-11-25 15:40:18] 2025-11-25 20:39:28,159 | INFO     | . get job = 0 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . initial setup = 2 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . payload setup = 5 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . stage-in = 0 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . payload execution = 31291 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . stage-out = 3 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | . log creation = 0 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,160 | INFO     | ..............................
[2025-11-25 15:40:18] 2025-11-25 20:39:28,308 | INFO     | 
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | job summary report
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | --------------------------------------------------
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | PanDA job id: 6895374018
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | task id: 47556137
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | errors: (none)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | pilot state: finished 
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | transexitcode: 0
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | exeerrorcode: 0
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | exeerrordiag: 
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | exitcode: 0
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | exitmsg: OK
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | cpuconsumptiontime: 276658 s
[2025-11-25 15:40:18] 2025-11-25 20:39:28,310 | INFO     | nevents: 1000
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | neventsw: 0
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | pid: 1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | pgrp: 1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | corecount: 9
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | event service: False
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | sizes: {0: 2284264, 4: 2284526, 11: 2284554, 31300: 2323888, 31303: 2332938, 31309: 2333128}
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | --------------------------------------------------
[2025-11-25 15:40:18] 2025-11-25 20:39:28,311 | INFO     | 
[2025-11-25 15:40:18] 2025-11-25 20:39:28,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 15:40:18] 2025-11-25 20:39:28,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:40:18] 2025-11-25 20:39:28,331 | INFO     | job 6895374018 has completed (purged errors)
[2025-11-25 15:40:18] 2025-11-25 20:39:28,331 | INFO     | overall cleanup function is called
[2025-11-25 15:40:18] 2025-11-25 20:39:29,347 | INFO     | --- collectZombieJob: --- 10, [1524295]
[2025-11-25 15:40:18] 2025-11-25 20:39:29,347 | INFO     | zombie collector waiting for pid 1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:29,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:40:18] 2025-11-25 20:39:29,348 | INFO     | collected zombie processes
[2025-11-25 15:40:18] 2025-11-25 20:39:29,348 | INFO     | will attempt to kill all subprocesses of pid=1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:29,547 | INFO     | process IDs to be killed: [1524295] (in reverse order)
[2025-11-25 15:40:18] 2025-11-25 20:39:29,603 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:40:18] 2025-11-25 20:39:29,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:40:18] 2025-11-25 20:39:29,609 | INFO     | did not find any defunct processes belonging to 1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:29,614 | INFO     | did not find any defunct processes belonging to 1524295
[2025-11-25 15:40:18] 2025-11-25 20:39:29,615 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:40:18] 2025-11-25 20:39:29,615 | INFO     | ready for new job
[2025-11-25 15:40:18] 2025-11-25 20:39:29,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:40:18] 2025-11-25 20:39:29,619 | INFO     | ***************************************
[2025-11-25 15:40:18] 2025-11-25 20:39:29,619 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:40:18] 2025-11-25 20:39:29,619 | INFO     | ***************************************
[2025-11-25 15:40:18] 2025-11-25 20:39:29,619 | INFO     | 
[2025-11-25 15:40:18] 2025-11-25 20:39:29,621 | INFO     | architecture information:
[2025-11-25 15:40:18] 2025-11-25 20:39:29,622 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:40:18] 2025-11-25 20:39:29,633 | INFO     | cat /etc/os-release:
[2025-11-25 15:40:18] NAME="CentOS Linux"
[2025-11-25 15:40:18] VERSION="7 (Core)"
[2025-11-25 15:40:18] ID="centos"
[2025-11-25 15:40:18] ID_LIKE="rhel fedora"
[2025-11-25 15:40:18] VERSION_ID="7"
[2025-11-25 15:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:40:18] ANSI_COLOR="0;31"
[2025-11-25 15:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:40:18] HOME_URL="https://www.centos.org/"
[2025-11-25 15:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:40:18] 
[2025-11-25 15:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:40:18] 
[2025-11-25 15:40:18] 2025-11-25 20:39:29,634 | INFO     | ***************************************
[2025-11-25 15:40:18] 2025-11-25 20:39:30,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 15:40:18] 2025-11-25 20:39:30,150 | INFO     | sufficient remaining disk space (38803603456 B)
[2025-11-25 15:40:18] 2025-11-25 20:39:30,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:40:18] 2025-11-25 20:39:30,151 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:40:18] 2025-11-25 20:39:30,151 | INFO     | update_server=False
[2025-11-25 15:40:18] 2025-11-25 20:39:30,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:40:18] 2025-11-25 20:39:30,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:40:18] 2025-11-25 20:39:30,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:40:18] 2025-11-25 20:39:30,644 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 15:40:18] 2025-11-25 20:39:30,644 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 15:40:18] 2025-11-25 20:39:30,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:40:18] 2025-11-25 20:39:30,645 | INFO     | will abort loop
[2025-11-25 15:40:18] 2025-11-25 20:39:30,820 | INFO     | all job control threads have been joined
[2025-11-25 15:40:18] 2025-11-25 20:39:31,147 | INFO     | all data control threads have been joined
[2025-11-25 15:40:18] 2025-11-25 20:39:31,157 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,157 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,205 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,419 | INFO     | all payload control threads have been joined
[2025-11-25 15:40:18] 2025-11-25 20:39:31,448 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,646 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,762 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:31,825 | INFO     | [job] control thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,153 | INFO     | [data] control thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,163 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,332 | INFO     | [job] validate thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,424 | INFO     | [payload] control thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,441 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,597 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,600 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,660 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:39:32,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:40:18] 2025-11-25 20:39:36,770 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:40:18] 2025-11-25 20:40:01,341 | INFO     | PID=1517900 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 15:40:18] 2025-11-25 20:40:01,341 | INFO     | .. there are 3 such processes running
[2025-11-25 15:40:18] 2025-11-25 20:40:01,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:40:18] 2025-11-25 20:40:01,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:40:18] 2025-11-25 20:40:01,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:40:18] 2025-11-25 20:40:13,432 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:40:18] 2025-11-25 20:40:13,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357803935552)>', '<ExcThread(monitor, started 140357165635328)>']
[2025-11-25 15:40:18] 2025-11-25 20:40:14,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:40:18] 2025-11-25 20:40:14,403 | INFO     | [monitor] control thread has ended
[2025-11-25 15:40:18] 2025-11-25 20:40:18,571 | INFO     | all workflow threads have been joined
[2025-11-25 15:40:18] 2025-11-25 20:40:18,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:40:18] 2025-11-25 20:40:18,572 | INFO     | traces error code: 0
[2025-11-25 15:40:18] 2025-11-25 20:40:18,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:40:18] 2025-11-25 20:40:18,676 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:40:18] 2025-11-25 20:40:18,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:40:18] 2025-11-25 20:40:18,681 [wrapper] pilotpid: 1517900
[2025-11-25 15:40:18] 2025-11-25 20:40:18,683 [wrapper] Pilot exit status: 0
[2025-11-25 15:40:18] 2025-11-25 20:40:18,692 [wrapper] pandaids: 6895374018
[2025-11-25 15:40:18] 2025-11-25 20:40:18,728 [wrapper] cleanup supervisor_pilot 1973599 1517901
[2025-11-25 15:40:18] 2025-11-25 20:40:18,731 [wrapper] Test setup, not cleaning
[2025-11-25 15:40:18] 2025-11-25 20:40:18,734 [wrapper] apfmon messages muted
[2025-11-25 15:40:18] 2025-11-25 20:40:18,736 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:40:18] 2025-11-25 20:40:18,738 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:40:18]  *** Error codes and diagnostics ***
[2025-11-25 15:40:18]     "exeErrorCode": 0,
[2025-11-25 15:40:18]     "exeErrorDiag": "",
[2025-11-25 15:40:18]     "pilotErrorCode": 0,
[2025-11-25 15:40:18]     "pilotErrorDiag": "",
[2025-11-25 15:40:18]  *** Listing of results directory ***
[2025-11-25 15:40:18] total 1307168
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:41 queuedata.json
[2025-11-25 15:40:18] -rwx------. 1 boincer umatlas     36292 Nov 23 17:42 runpilot2-wrapper.sh
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:40:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 06:57 run_atlas
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 06:57 job.xml
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas 410295822 Nov 25 06:57 EVNT.47483658._000931.pool.root.1
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 06:57 start_atlas.sh
[2025-11-25 15:40:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 06:57 shared
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 06:57 input.tar.gz
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 06:57 boinc_lockfile
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 06:57 pandaJob.out
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas    991894 Nov 25 06:57 agis_schedconf.cvmfs.json
[2025-11-25 15:40:18] drwx------. 5 boincer umatlas      4096 Nov 25 06:57 pilot3
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas       532 Nov 25 15:30 boinc_task_state.xml
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas 911545262 Nov 25 15:38 HITS.47556137._009176.pool.root.1
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas      6532 Nov 25 15:39 init_data.xml
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas      1046 Nov 25 15:39 memory_monitor_summary.json
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas   1516240 Nov 25 15:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas   1925058 Nov 25 15:39 log.47556137._009176.job.log.tgz.1
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas      8616 Nov 25 15:39 heartbeat.json
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas        95 Nov 25 15:40 pilot_heartbeat.json
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 15:40 boinc_mmap_file
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas        29 Nov 25 15:40 wrapper_checkpoint.txt
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas      5009 Nov 25 15:40 pilotlog.txt
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas   4465771 Nov 25 15:40 log.47556137._009176.job.log.1
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas       353 Nov 25 15:40 output.list
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas       620 Nov 25 15:40 runtime_log
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas   6410240 Nov 25 15:40 result.tar.gz
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas       659 Nov 25 15:40 ZCDLDmsxXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEoIKDm5AC0mm.diag
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas      8818 Nov 25 15:40 runtime_log.err
[2025-11-25 15:40:18] -rw-r--r--. 1 boincer umatlas     21315 Nov 25 15:40 stderr.txt
[2025-11-25 15:40:18] HITS file was successfully produced:
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas 911545262 Nov 25 15:38 shared/HITS.pool.root.1
[2025-11-25 15:40:18]  *** Contents of shared directory: ***
[2025-11-25 15:40:18] total 1297728
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas 410295822 Nov 25 06:57 ATLAS.root_0
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 06:57 start_atlas.sh
[2025-11-25 15:40:18] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 06:57 input.tar.gz
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas 911545262 Nov 25 15:38 HITS.pool.root.1
[2025-11-25 15:40:18] -rw-------. 1 boincer umatlas   6410240 Nov 25 15:40 result.tar.gz
15:40:20 (1513877): run_atlas exited; CPU time 276963.840688
15:40:20 (1513877): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN