Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:57:36 (2880050): wrapper (7.7.26015): starting
08:57:36 (2880050): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:57:36] Arguments: --nthreads 8
[2025-11-25 08:57:36] Threads: 8
[2025-11-25 08:57:36] Checking for CVMFS
[2025-11-25 08:57:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:57:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:57:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:57:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:57:38] 2.13.3.0 13693 28697 352820 153284 3 439 36373784 40960001 23101 16776704 0 79630287 99.607 84654170 37483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 08:57:38] CVMFS is ok
[2025-11-25 08:57:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:57:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:57:38] Further information can be found at the LHC@home message board.
[2025-11-25 08:57:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:57:38] Checking for apptainer binary...
[2025-11-25 08:57:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:57:38] Running /usr/bin/apptainer --version
[2025-11-25 08:57:39] apptainer version 1.4.4-1.el9
[2025-11-25 08:57:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:57:39] c6-5-37-3.aglt2.org
[2025-11-25 08:57:39] apptainer works
[2025-11-25 08:57:39] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:57:39] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:57:39] Starting ATLAS job with PandaID=6895559666
[2025-11-25 08:57:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:40:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:40:59] 2025-11-26 22:40:11,016 | INFO     | mean x: 1764137958.6685684
[2025-11-26 17:40:59] 2025-11-26 22:40:11,016 | INFO     | mean y: 2938611.487033195
[2025-11-26 17:40:59] 2025-11-26 22:40:11,016 | INFO     | intersect: -6760114307.225744
[2025-11-26 17:40:59] 2025-11-26 22:40:11,019 | INFO     | chi2: 10.422039415548602
[2025-11-26 17:40:59] 2025-11-26 22:40:11,021 | INFO     | sum of square deviations: 2205104745242.7134
[2025-11-26 17:40:59] 2025-11-26 22:40:11,189 | INFO     | sum of deviations: 9199620506617.13
[2025-11-26 17:40:59] 2025-11-26 22:40:11,189 | INFO     | mean x: 1764137806.1710868
[2025-11-26 17:40:59] 2025-11-26 22:40:11,189 | INFO     | mean y: 2944624.1788871554
[2025-11-26 17:40:59] 2025-11-26 22:40:11,189 | INFO     | intersect: -7356977108.865017
[2025-11-26 17:40:59] 2025-11-26 22:40:11,195 | INFO     | chi2: 7.106697456089585
[2025-11-26 17:40:59] 2025-11-26 22:40:11,196 | INFO     | current chi2=7.106697456089585 (change=31.81087527372877 %)
[2025-11-26 17:40:59] 2025-11-26 22:40:11,198 | INFO     | sum of square deviations: 2187950124393.336
[2025-11-26 17:40:59] 2025-11-26 22:40:11,384 | INFO     | sum of deviations: 9695395979798.76
[2025-11-26 17:40:59] 2025-11-26 22:40:11,385 | INFO     | mean x: 1764137653.6741397
[2025-11-26 17:40:59] 2025-11-26 22:40:11,385 | INFO     | mean y: 2949029.2492179354
[2025-11-26 17:40:59] 2025-11-26 22:40:11,385 | INFO     | intersect: -7814419805.8774
[2025-11-26 17:40:59] 2025-11-26 22:40:11,387 | INFO     | chi2: 5.04815099895837
[2025-11-26 17:40:59] 2025-11-26 22:40:11,387 | INFO     | current chi2=5.04815099895837 (change=28.96628806629848 %)
[2025-11-26 17:40:59] 2025-11-26 22:40:11,389 | INFO     | sum of square deviations: 2170884013265.034
[2025-11-26 17:40:59] 2025-11-26 22:40:11,608 | INFO     | sum of deviations: 9757460321717.852
[2025-11-26 17:40:59] 2025-11-26 22:40:11,608 | INFO     | mean x: 1764137501.174072
[2025-11-26 17:40:59] 2025-11-26 22:40:11,608 | INFO     | mean y: 2949582.5169890225
[2025-11-26 17:40:59] 2025-11-26 22:40:11,608 | INFO     | intersect: -7926309449.554092
[2025-11-26 17:40:59] 2025-11-26 22:40:11,652 | INFO     | monitor loop #7637: job 0:6895559666 is in state 'finished'
[2025-11-26 17:40:59] 2025-11-26 22:40:11,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:40:59] 2025-11-26 22:40:11,653 | INFO     | chi2: 4.877007435099153
[2025-11-26 17:40:59] 2025-11-26 22:40:11,654 | INFO     | current chi2=4.877007435099153 (change=3.3902227547181236 %)
[2025-11-26 17:40:59] 2025-11-26 22:40:11,654 | INFO     | right removable region: 1912
[2025-11-26 17:40:59] 2025-11-26 22:40:11,686 | INFO     | sum of square deviations: 2205103488641.37
[2025-11-26 17:40:59] 2025-11-26 22:40:12,092 | INFO     | sum of deviations: 7821525228799.035
[2025-11-26 17:40:59] 2025-11-26 22:40:12,092 | INFO     | mean x: 1764138111.1716068
[2025-11-26 17:40:59] 2025-11-26 22:40:12,093 | INFO     | mean y: 2944784.1726469058
[2025-11-26 17:40:59] 2025-11-26 22:40:12,093 | INFO     | intersect: -6254471620.404407
[2025-11-26 17:40:59] 2025-11-26 22:40:12,106 | INFO     | chi2: 7.2147039077960695
[2025-11-26 17:40:59] 2025-11-26 22:40:12,106 | INFO     | current chi2=7.2147039077960695 (change=30.774547858334905 %)
[2025-11-26 17:40:59] 2025-11-26 22:40:12,109 | INFO     | sum of square deviations: 2187947728009.69
[2025-11-26 17:40:59] 2025-11-26 22:40:12,669 | INFO     | time since job start (117711s) is within the limit (172800.0s)
[2025-11-26 17:40:59] 2025-11-26 22:40:12,775 | INFO     | sum of deviations: 7495189703584.583
[2025-11-26 17:40:59] 2025-11-26 22:40:12,776 | INFO     | mean x: 1764138263.6736183
[2025-11-26 17:40:59] 2025-11-26 22:40:12,776 | INFO     | mean y: 2947683.3044838374
[2025-11-26 17:40:59] 2025-11-26 22:40:12,776 | INFO     | intersect: -6040410108.252193
[2025-11-26 17:40:59] 2025-11-26 22:40:12,783 | INFO     | chi2: 6.526077162881901
[2025-11-26 17:40:59] 2025-11-26 22:40:12,783 | INFO     | current chi2=6.526077162881901 (change=9.544767931086568 %)
[2025-11-26 17:40:59] 2025-11-26 22:40:12,783 | INFO     | left removable region: 20
[2025-11-26 17:40:59] 2025-11-26 22:40:12,787 | INFO     | sum of square deviations: 2100173321375.3552
[2025-11-26 17:40:59] 2025-11-26 22:40:13,069 | INFO     | sum of deviations: 8431553338070.703
[2025-11-26 17:40:59] 2025-11-26 22:40:13,069 | INFO     | mean x: 1764138080.6834037
[2025-11-26 17:40:59] 2025-11-26 22:40:13,069 | INFO     | mean y: 2961377.283298097
[2025-11-26 17:40:59] 2025-11-26 22:40:13,069 | INFO     | intersect: -7079513279.266893
[2025-11-26 17:40:59] 2025-11-26 22:40:13,071 | INFO     | chi2: 0.8550736747842217
[2025-11-26 17:40:59] 2025-11-26 22:40:13,071 | INFO     | current memory leak: 4.01 B/s (using 1892 data points, chi2=0.86)
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | could have reported an average CPU frequency of 2965 MHz (68 samples)
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | ..............................
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . Timing measurements:
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . get job = 0 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . initial setup = 4 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . payload setup = 22 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . stage-in = 0 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . payload execution = 117613 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . stage-out = 11 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | . log creation = 3 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,074 | INFO     | ..............................
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | 
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | job summary report
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | --------------------------------------------------
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | PanDA job id: 6895559666
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | task id: 47556149
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | errors: (none)
[2025-11-26 17:40:59] 2025-11-26 22:40:13,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | pilot state: finished 
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | transexitcode: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | exeerrorcode: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | exeerrordiag: 
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | exitcode: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | exitmsg: OK
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | cpuconsumptiontime: 254070 s
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | nevents: 1000
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | neventsw: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | pid: 2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:13,528 | INFO     | pgrp: 2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | corecount: 8
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | event service: False
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 19: 2284633, 23: 2284661, 117639: 2365939, 117652: 2374933, 117656: 2374989, 117674: 2375235}
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | --------------------------------------------------
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | 
[2025-11-26 17:40:59] 2025-11-26 22:40:13,529 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 17:40:59] 2025-11-26 22:40:13,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:40:59] 2025-11-26 22:40:13,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:40:59] 2025-11-26 22:40:13,570 | INFO     | job 6895559666 has completed (purged errors)
[2025-11-26 17:40:59] 2025-11-26 22:40:13,570 | INFO     | overall cleanup function is called
[2025-11-26 17:40:59] 2025-11-26 22:40:14,949 | INFO     | --- collectZombieJob: --- 10, [2902796]
[2025-11-26 17:40:59] 2025-11-26 22:40:14,949 | INFO     | zombie collector waiting for pid 2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:14,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:40:59] 2025-11-26 22:40:14,950 | INFO     | collected zombie processes
[2025-11-26 17:40:59] 2025-11-26 22:40:14,950 | INFO     | will attempt to kill all subprocesses of pid=2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:17,157 | INFO     | PID=2888171 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:40:59] 2025-11-26 22:40:17,158 | INFO     | .. there are 32 such processes running
[2025-11-26 17:40:59] 2025-11-26 22:40:17,407 | INFO     | process IDs to be killed: [2902796] (in reverse order)
[2025-11-26 17:40:59] 2025-11-26 22:40:17,594 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:40:59] 2025-11-26 22:40:17,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:40:59] 2025-11-26 22:40:17,633 | INFO     | did not find any defunct processes belonging to 2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:17,661 | INFO     | did not find any defunct processes belonging to 2902796
[2025-11-26 17:40:59] 2025-11-26 22:40:17,667 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:40:59] 2025-11-26 22:40:17,667 | INFO     | ready for new job
[2025-11-26 17:40:59] 2025-11-26 22:40:17,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:40:59] 2025-11-26 22:40:17,684 | INFO     | ***************************************
[2025-11-26 17:40:59] 2025-11-26 22:40:17,684 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:40:59] 2025-11-26 22:40:17,684 | INFO     | ***************************************
[2025-11-26 17:40:59] 2025-11-26 22:40:17,684 | INFO     | 
[2025-11-26 17:40:59] 2025-11-26 22:40:17,691 | INFO     | architecture information:
[2025-11-26 17:40:59] 2025-11-26 22:40:17,736 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:40:59] 2025-11-26 22:40:17,838 | INFO     | cat /etc/os-release:
[2025-11-26 17:40:59] NAME="CentOS Linux"
[2025-11-26 17:40:59] VERSION="7 (Core)"
[2025-11-26 17:40:59] ID="centos"
[2025-11-26 17:40:59] ID_LIKE="rhel fedora"
[2025-11-26 17:40:59] VERSION_ID="7"
[2025-11-26 17:40:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:40:59] ANSI_COLOR="0;31"
[2025-11-26 17:40:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:40:59] HOME_URL="https://www.centos.org/"
[2025-11-26 17:40:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:40:59] 
[2025-11-26 17:40:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:40:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:40:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:40:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:40:59] 
[2025-11-26 17:40:59] 2025-11-26 22:40:17,839 | INFO     | ***************************************
[2025-11-26 17:40:59] 2025-11-26 22:40:18,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 17:40:59] 2025-11-26 22:40:18,487 | INFO     | sufficient remaining disk space (70558679040 B)
[2025-11-26 17:40:59] 2025-11-26 22:40:18,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:40:59] 2025-11-26 22:40:18,487 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:40:59] 2025-11-26 22:40:18,488 | INFO     | update_server=False
[2025-11-26 17:40:59] 2025-11-26 22:40:18,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:40:59] 2025-11-26 22:40:18,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:40:59] 2025-11-26 22:40:18,503 | INFO     | aborting loop
[2025-11-26 17:40:59] 2025-11-26 22:40:18,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:40:59] 2025-11-26 22:40:18,713 | INFO     | all data control threads have been joined
[2025-11-26 17:40:59] 2025-11-26 22:40:18,840 | INFO     | all job control threads have been joined
[2025-11-26 17:40:59] 2025-11-26 22:40:18,983 | INFO     | all payload control threads have been joined
[2025-11-26 17:40:59] 2025-11-26 22:40:19,492 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:19,509 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:19,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:40:59] 2025-11-26 22:40:19,590 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:19,721 | INFO     | [data] control thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:19,848 | INFO     | [job] control thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:19,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:40:59] 2025-11-26 22:40:19,989 | INFO     | [payload] control thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,074 | INFO     | [job] validate thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,075 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,080 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,529 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,613 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,631 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:20,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:21,066 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:21,966 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:23,652 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:40:59] 2025-11-26 22:40:50,328 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:40:59] 2025-11-26 22:40:51,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236678563648)>', '<ExcThread(monitor, started 140236405315328)>']
[2025-11-26 17:40:59] 2025-11-26 22:40:51,931 | INFO     | PID=2888171 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:40:59] 2025-11-26 22:40:51,931 | INFO     | .. there are 32 such processes running
[2025-11-26 17:40:59] 2025-11-26 22:40:51,931 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:40:59] 2025-11-26 22:40:51,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:40:59] 2025-11-26 22:40:51,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:40:59] 2025-11-26 22:40:51,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:40:59] 2025-11-26 22:40:51,932 | INFO     | [monitor] control thread has ended
[2025-11-26 17:40:59] 2025-11-26 22:40:56,405 | INFO     | all workflow threads have been joined
[2025-11-26 17:40:59] 2025-11-26 22:40:56,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:40:59] 2025-11-26 22:40:56,406 | INFO     | traces error code: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:56,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:40:59] 2025-11-26 22:40:59,467 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:40:59] 2025-11-26 22:40:59,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:40:59] 2025-11-26 22:40:59,472 [wrapper] pilotpid: 2888171
[2025-11-26 17:40:59] 2025-11-26 22:40:59,475 [wrapper] Pilot exit status: 0
[2025-11-26 17:40:59] 2025-11-26 22:40:59,496 [wrapper] pandaids: 6895559666
[2025-11-26 17:40:59] 2025-11-26 22:40:59,575 [wrapper] cleanup supervisor_pilot  749186 2888172
[2025-11-26 17:40:59] 2025-11-26 22:40:59,579 [wrapper] Test setup, not cleaning
[2025-11-26 17:40:59] 2025-11-26 22:40:59,589 [wrapper] apfmon messages muted
[2025-11-26 17:40:59] 2025-11-26 22:40:59,597 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:40:59] 2025-11-26 22:40:59,601 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:40:59]  *** Error codes and diagnostics ***
[2025-11-26 17:40:59]     "exeErrorCode": 0,
[2025-11-26 17:40:59]     "exeErrorDiag": "",
[2025-11-26 17:40:59]     "pilotErrorCode": 0,
[2025-11-26 17:40:59]     "pilotErrorDiag": "",
[2025-11-26 17:40:59]  *** Listing of results directory ***
[2025-11-26 17:40:59] total 1325552
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 05:51 queuedata.json
[2025-11-26 17:40:59] -rwx------. 1 boincer umatlas     36292 Nov 24 05:51 runpilot2-wrapper.sh
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas       100 Nov 25 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:40:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 08:57 run_atlas
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas       105 Nov 25 08:57 job.xml
[2025-11-26 17:40:59] -rw-r--r--. 2 boincer umatlas 407930194 Nov 25 08:57 EVNT.47483658._001312.pool.root.1
[2025-11-26 17:40:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:57 start_atlas.sh
[2025-11-26 17:40:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 08:57 shared
[2025-11-26 17:40:59] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 08:57 input.tar.gz
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas         0 Nov 25 08:57 boinc_lockfile
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 08:57 pandaJob.out
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas        57 Nov 25 08:57 setup.sh.local
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas    991909 Nov 25 08:58 agis_schedconf.cvmfs.json
[2025-11-26 17:40:59] drwx------. 5 boincer umatlas      4096 Nov 25 08:58 pilot3
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:26 boinc_task_state.xml
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas 908685545 Nov 26 17:37 HITS.47556149._002983.pool.root.1
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas      1064 Nov 26 17:39 memory_monitor_summary.json
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas   2869180 Nov 26 17:39 log.47556149._002983.job.log.tgz.1
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas      8628 Nov 26 17:40 heartbeat.json
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas        95 Nov 26 17:40 pilot_heartbeat.json
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 17:40 init_data.xml
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:40 wrapper_checkpoint.txt
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:40 boinc_mmap_file
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas      4824 Nov 26 17:40 pilotlog.txt
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas  15541875 Nov 26 17:40 log.47556149._002983.job.log.1
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas       353 Nov 26 17:40 output.list
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:40 runtime_log
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas  18432000 Nov 26 17:40 result.tar.gz
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas      9349 Nov 26 17:40 runtime_log.err
[2025-11-26 17:40:59] -rw-------. 1 boincer umatlas       665 Nov 26 17:40 JQaKDmvLjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi1IKDmjtTylm.diag
[2025-11-26 17:40:59] -rw-r--r--. 1 boincer umatlas     21351 Nov 26 17:40 stderr.txt
[2025-11-26 17:40:59] HITS file was successfully produced:
[2025-11-26 17:41:00] -rw-------. 1 boincer umatlas 908685545 Nov 26 17:37 shared/HITS.pool.root.1
[2025-11-26 17:41:00]  *** Contents of shared directory: ***
[2025-11-26 17:41:00] total 1304368
[2025-11-26 17:41:00] -rw-r--r--. 2 boincer umatlas 407930194 Nov 25 08:57 ATLAS.root_0
[2025-11-26 17:41:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:57 start_atlas.sh
[2025-11-26 17:41:00] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 08:57 input.tar.gz
[2025-11-26 17:41:00] -rw-------. 1 boincer umatlas 908685545 Nov 26 17:37 HITS.pool.root.1
[2025-11-26 17:41:00] -rw-------. 1 boincer umatlas  18432000 Nov 26 17:40 result.tar.gz
17:41:01 (2880050): run_atlas exited; CPU time 257028.906770
17:41:01 (2880050): called boinc_finish(0)

</stderr_txt>
]]>

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