Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:37 (9505): wrapper (7.7.26015): starting
21:23:37 (9505): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 21:23:37] Arguments: --nthreads 8
[2025-11-27 21:23:37] Threads: 8
[2025-11-27 21:23:37] Checking for CVMFS
[2025-11-27 21:23:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:23:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:23:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:23:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:23:40] 2.11.2.0 29208 224265 134792 153384 0 84 18489713 25165824 1288 130560 8 96914468 99.901 38913787 2333 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 21:23:40] CVMFS is ok
[2025-11-27 21:23:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:23:40] Checking for apptainer binary...
[2025-11-27 21:23:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:23:40] Running /usr/bin/apptainer --version
[2025-11-27 21:23:40] apptainer version 1.3.2-1.el7
[2025-11-27 21:23:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:23:50] cg-vwn345.simple-grid.lan
[2025-11-27 21:23:50] apptainer works
[2025-11-27 21:23:50] Set ATHENA_PROC_NUMBER=8
[2025-11-27 21:23:50] Set ATHENA_CORE_NUMBER=8
[2025-11-27 21:23:50] Starting ATLAS job with PandaID=6895374399
[2025-11-27 21:23:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 20:20:26]  *** The last 200 lines of the pilot log: ***
[2025-11-28 20:20:26] 2025-11-28 19:19:38,762 | INFO     | monitor loop #5552: job 0:6895374399 is in state 'finished'
[2025-11-28 20:20:26] 2025-11-28 19:19:38,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:20:26] 2025-11-28 19:19:39,733 | INFO     | time since job start (82322s) is within the limit (172800.0s)
[2025-11-28 20:20:26] 2025-11-28 19:19:41,267 | INFO     | monitor loop #5553: job 0:6895374399 is in state 'finished'
[2025-11-28 20:20:26] 2025-11-28 19:19:41,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:20:26] 2025-11-28 19:19:41,741 | INFO     | time since job start (82324s) is within the limit (172800.0s)
[2025-11-28 20:20:26] 2025-11-28 19:19:43,749 | INFO     | time since job start (82326s) is within the limit (172800.0s)
[2025-11-28 20:20:26] 2025-11-28 19:19:43,773 | INFO     | monitor loop #5554: job 0:6895374399 is in state 'finished'
[2025-11-28 20:20:26] 2025-11-28 19:19:43,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:20:26] 2025-11-28 19:19:45,757 | INFO     | time since job start (82328s) is within the limit (172800.0s)
[2025-11-28 20:20:26] 2025-11-28 19:19:46,277 | INFO     | monitor loop #5555: job 0:6895374399 is in state 'finished'
[2025-11-28 20:20:26] 2025-11-28 19:19:46,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 20:20:26] 2025-11-28 19:19:47,733 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 20:20:26] 2025-11-28 19:19:47,734 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 20:20:26] 2025-11-28 19:19:47,735 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6895374399/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 20:20:26] 2025-11-28 19:19:47,736 | INFO     | extracted standard info from prmon json
[2025-11-28 20:20:26] 2025-11-28 19:19:47,736 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 20:20:26] 2025-11-28 19:19:47,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 20:20:26] 2025-11-28 19:19:47,772 | INFO     | fitting pss+swap vs Time
[2025-11-28 20:20:26] 2025-11-28 19:19:47,775 | INFO     | sum of square deviations: 746092834946.3887
[2025-11-28 20:20:26] 2025-11-28 19:19:47,783 | INFO     | time since job start (82330s) is within the limit (172800.0s)
[2025-11-28 20:20:26] 2025-11-28 19:19:47,859 | INFO     | sum of deviations: 2930550666113.8213
[2025-11-28 20:20:26] 2025-11-28 19:19:47,859 | INFO     | mean x: 1764316586.597015
[2025-11-28 20:20:26] 2025-11-28 19:19:47,860 | INFO     | mean y: 2847136.6552238804
[2025-11-28 20:20:26] 2025-11-28 19:19:47,860 | INFO     | intersect: -6927147236.57726
[2025-11-28 20:20:26] 2025-11-28 19:19:47,861 | INFO     | chi2: 20.122721946390026
[2025-11-28 20:20:26] 2025-11-28 19:19:47,863 | INFO     | sum of square deviations: 737772624955.3489
[2025-11-28 20:20:26] 2025-11-28 19:19:47,943 | INFO     | sum of deviations: 3391142505616.5176
[2025-11-28 20:20:26] 2025-11-28 19:19:47,944 | INFO     | mean x: 1764316434.1011236
[2025-11-28 20:20:26] 2025-11-28 19:19:47,944 | INFO     | mean y: 2855577.9146067416
[2025-11-28 20:20:26] 2025-11-28 19:19:47,944 | INFO     | intersect: -8106754687.714572
[2025-11-28 20:20:26] 2025-11-28 19:19:47,946 | INFO     | chi2: 16.73003100510635
[2025-11-28 20:20:26] 2025-11-28 19:19:47,946 | INFO     | current chi2=16.73003100510635 (change=16.860000104967494 %)
[2025-11-28 20:20:26] 2025-11-28 19:19:47,946 | INFO     | right removable region: 1334
[2025-11-28 20:20:26] 2025-11-28 19:19:47,948 | INFO     | sum of square deviations: 737771728255.3485
[2025-11-28 20:20:26] 2025-11-28 19:19:48,017 | INFO     | sum of deviations: 2358612259344.541
[2025-11-28 20:20:26] 2025-11-28 19:19:48,018 | INFO     | mean x: 1764316739.1011236
[2025-11-28 20:20:26] 2025-11-28 19:19:48,018 | INFO     | mean y: 2857618.3737827716
[2025-11-28 20:20:26] 2025-11-28 19:19:48,018 | INFO     | intersect: -5637557879.8606825
[2025-11-28 20:20:26] 2025-11-28 19:19:48,019 | INFO     | chi2: 15.268285587903918
[2025-11-28 20:20:26] 2025-11-28 19:19:48,020 | INFO     | current chi2=15.268285587903918 (change=24.12415363795743 %)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,020 | INFO     | left removable region: 10
[2025-11-28 20:20:26] 2025-11-28 19:19:48,021 | INFO     | sum of square deviations: 719684613666.9011
[2025-11-28 20:20:26] 2025-11-28 19:19:48,072 | INFO     | sum of deviations: 2443023173291.7646
[2025-11-28 20:20:26] 2025-11-28 19:19:48,073 | INFO     | mean x: 1764316708.610272
[2025-11-28 20:20:26] 2025-11-28 19:19:48,073 | INFO     | mean y: 2877059.590634441
[2025-11-28 20:20:26] 2025-11-28 19:19:48,073 | INFO     | intersect: -5986227782.04172
[2025-11-28 20:20:26] 2025-11-28 19:19:48,074 | INFO     | chi2: 7.614266227516797
[2025-11-28 20:20:26] 2025-11-28 19:19:48,075 | INFO     | current memory leak: 3.39 B/s (using 1324 data points, chi2=7.61)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | ..............................
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . Timing measurements:
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . get job = 0 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . initial setup = 6 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . payload setup = 133 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . stage-in = 0 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . payload execution = 81897 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . stage-out = 5 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,076 | INFO     | . log creation = 2 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,077 | INFO     | ..............................
[2025-11-28 20:20:26] 2025-11-28 19:19:48,182 | INFO     | 
[2025-11-28 20:20:26] 2025-11-28 19:19:48,182 | INFO     | job summary report
[2025-11-28 20:20:26] 2025-11-28 19:19:48,182 | INFO     | --------------------------------------------------
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | PanDA job id: 6895374399
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | task id: 47556137
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | errors: (none)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | pilot state: finished 
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | transexitcode: 0
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | exeerrorcode: 0
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | exeerrordiag: 
[2025-11-28 20:20:26] 2025-11-28 19:19:48,183 | INFO     | exitcode: 0
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | exitmsg: OK
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | cpuconsumptiontime: 310233 s
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | nevents: 1000
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | neventsw: 0
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | pid: 19859
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | pgrp: 19859
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | corecount: 8
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | event service: False
[2025-11-28 20:20:26] 2025-11-28 19:19:48,184 | INFO     | sizes: {0: 2284145, 1: 2284344, 2: 2284344, 12: 2284372, 23: 2284400, 34: 2284428, 45: 2284584, 55: 2284612, 66: 2284640, 77: 2284668, 87: 2284724, 98: 2285032, 10
[2025-11-28 20:20:26] 2025-11-28 19:19:48,185 | INFO     | --------------------------------------------------
[2025-11-28 20:20:26] 2025-11-28 19:19:48,185 | INFO     | 
[2025-11-28 20:20:26] 2025-11-28 19:19:48,185 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-28 20:20:26] 2025-11-28 19:19:48,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | job 6895374399 has completed (purged errors)
[2025-11-28 20:20:26] 2025-11-28 19:19:48,331 | INFO     | overall cleanup function is called
[2025-11-28 20:20:26] 2025-11-28 19:19:49,353 | INFO     | --- collectZombieJob: --- 10, [19859]
[2025-11-28 20:20:26] 2025-11-28 19:19:49,353 | INFO     | zombie collector waiting for pid 19859
[2025-11-28 20:20:26] 2025-11-28 19:19:49,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 20:20:26] 2025-11-28 19:19:49,354 | INFO     | collected zombie processes
[2025-11-28 20:20:26] 2025-11-28 19:19:49,354 | INFO     | will attempt to kill all subprocesses of pid=19859
[2025-11-28 20:20:26] 2025-11-28 19:19:49,493 | INFO     | process IDs to be killed: [19859] (in reverse order)
[2025-11-28 20:20:26] 2025-11-28 19:19:50,206 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 20:20:26] 2025-11-28 19:19:50,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 20:20:26] 2025-11-28 19:19:50,209 | INFO     | did not find any defunct processes belonging to 19859
[2025-11-28 20:20:26] 2025-11-28 19:19:50,212 | INFO     | did not find any defunct processes belonging to 19859
[2025-11-28 20:20:26] 2025-11-28 19:19:50,280 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 20:20:26] 2025-11-28 19:19:50,281 | INFO     | ready for new job
[2025-11-28 20:20:26] 2025-11-28 19:19:50,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 20:20:26] 2025-11-28 19:19:50,286 | INFO     | ***************************************
[2025-11-28 20:20:26] 2025-11-28 19:19:50,286 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 20:20:26] 2025-11-28 19:19:50,286 | INFO     | ***************************************
[2025-11-28 20:20:26] 2025-11-28 19:19:50,287 | INFO     | 
[2025-11-28 20:20:26] 2025-11-28 19:19:50,287 | INFO     | pilot is running in a VM
[2025-11-28 20:20:26] 2025-11-28 19:19:50,287 | INFO     | architecture information:
[2025-11-28 20:20:26] 2025-11-28 19:19:50,294 | INFO     | executing command: cat /etc/os-release
[2025-11-28 20:20:26] 2025-11-28 19:19:50,483 | INFO     | cat /etc/os-release:
[2025-11-28 20:20:26] NAME="CentOS Linux"
[2025-11-28 20:20:26] VERSION="7 (Core)"
[2025-11-28 20:20:26] ID="centos"
[2025-11-28 20:20:26] ID_LIKE="rhel fedora"
[2025-11-28 20:20:26] VERSION_ID="7"
[2025-11-28 20:20:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 20:20:26] ANSI_COLOR="0;31"
[2025-11-28 20:20:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 20:20:26] HOME_URL="https://www.centos.org/"
[2025-11-28 20:20:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 20:20:26] 
[2025-11-28 20:20:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 20:20:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 20:20:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 20:20:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 20:20:26] 
[2025-11-28 20:20:26] 2025-11-28 19:19:50,483 | INFO     | ***************************************
[2025-11-28 20:20:26] 2025-11-28 19:19:50,986 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-28 20:20:26] 2025-11-28 19:19:51,163 | INFO     | sufficient remaining disk space (492922994688 B)
[2025-11-28 20:20:26] 2025-11-28 19:19:51,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 20:20:26] 2025-11-28 19:19:51,163 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 20:20:26] 2025-11-28 19:19:51,163 | INFO     | update_server=False
[2025-11-28 20:20:26] 2025-11-28 19:19:51,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 20:20:26] 2025-11-28 19:19:51,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 20:20:26] 2025-11-28 19:19:51,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 20:20:26] 2025-11-28 19:19:51,292 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 20:20:26] 2025-11-28 19:19:51,292 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 20:20:26] 2025-11-28 19:19:51,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:20:26] 2025-11-28 19:19:51,293 | INFO     | will abort loop
[2025-11-28 20:20:26] 2025-11-28 19:19:51,886 | INFO     | all data control threads have been joined
[2025-11-28 20:20:26] 2025-11-28 19:19:51,904 | INFO     | all payload control threads have been joined
[2025-11-28 20:20:26] 2025-11-28 19:19:52,169 | INFO     | [job] retrieve thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,295 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,298 | INFO     | [job] job monitor thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,368 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,786 | INFO     | all job control threads have been joined
[2025-11-28 20:20:26] 2025-11-28 19:19:52,865 | INFO     | [payload] failed_post thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,892 | INFO     | [data] control thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:52,910 | INFO     | [payload] control thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,009 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,033 | INFO     | [data] copytool_in thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,171 | INFO     | [data] copytool_out thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 20:20:26] 2025-11-28 19:19:53,202 | INFO     | [job] validate thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,487 | INFO     | [payload] validate_post thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:53,792 | INFO     | [job] control thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:54,204 | INFO     | [job] queue monitor thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:19:55,176 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:20:00,501 | INFO     | [monitor] cgroup control has ended
[2025-11-28 20:20:26] 2025-11-28 19:20:01,963 | INFO     | job.realtimelogging is not enabled
[2025-11-28 20:20:26] 2025-11-28 19:20:02,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 20:20:26] 2025-11-28 19:20:04,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627169085248)>', '<ExcThread(monitor, started 140626708371200)>']
[2025-11-28 20:20:26] 2025-11-28 19:20:09,576 | INFO     | all workflow threads have been joined
[2025-11-28 20:20:26] 2025-11-28 19:20:09,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 20:20:26] 2025-11-28 19:20:09,577 | INFO     | traces error code: 0
[2025-11-28 20:20:26] 2025-11-28 19:20:09,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 20:20:26] 2025-11-28 19:20:21,026 | INFO     | PID=13281 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | INFO     | .. there are 9 such processes running
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 20:20:26] 2025-11-28 19:20:21,027 | INFO     | [monitor] control thread has ended
[2025-11-28 20:20:26] 2025-11-28 19:20:21,348 [wrapper] ==== pilot stdout END ====
[2025-11-28 20:20:26] 2025-11-28 19:20:21,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 20:20:26] 2025-11-28 19:20:21,519 [wrapper] pilotpid: 13281
[2025-11-28 20:20:26] 2025-11-28 19:20:21,574 [wrapper] Pilot exit status: 0
[2025-11-28 20:20:26] 2025-11-28 19:20:22,001 [wrapper] pandaids: 6895374399
[2025-11-28 20:20:26] 2025-11-28 19:20:22,801 [wrapper] cleanup supervisor_pilot 26163 13282
[2025-11-28 20:20:26] 2025-11-28 19:20:22,883 [wrapper] Test setup, not cleaning
[2025-11-28 20:20:26] 2025-11-28 19:20:22,978 [wrapper] apfmon messages muted
[2025-11-28 20:20:26] 2025-11-28 19:20:23,080 [wrapper] ==== wrapper stdout END ====
[2025-11-28 20:20:26] 2025-11-28 19:20:23,162 [wrapper] ==== wrapper stderr END ====
[2025-11-28 20:20:26]  *** Error codes and diagnostics ***
[2025-11-28 20:20:26]     "exeErrorCode": 0,
[2025-11-28 20:20:26]     "exeErrorDiag": "",
[2025-11-28 20:20:26]     "pilotErrorCode": 0,
[2025-11-28 20:20:26]     "pilotErrorDiag": "",
[2025-11-28 20:20:26]  *** Listing of results directory ***
[2025-11-28 20:20:26] total 1326816
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc    576529 Nov 24 00:11 pilot3.tar.gz
[2025-11-28 20:20:26] -rwx------. 1 boinc boinc     36292 Nov 24 00:17 runpilot2-wrapper.sh
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc      5112 Nov 24 00:17 queuedata.json
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc       100 Nov 27 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 20:20:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 21:23 run_atlas
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc       105 Nov 27 21:23 job.xml
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc      6392 Nov 27 21:23 init_data.xml
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc 408293933 Nov 27 21:23 EVNT.47483658._000941.pool.root.1
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:23 start_atlas.sh
[2025-11-28 20:20:26] drwxrwx--x. 2 boinc boinc        68 Nov 27 21:23 shared
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc    590095 Nov 27 21:23 input.tar.gz
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc         0 Nov 27 21:23 boinc_lockfile
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc      2786 Nov 27 21:23 pandaJob.out
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc    991500 Nov 27 21:27 agis_schedconf.cvmfs.json
[2025-11-28 20:20:26] drwx------. 5 boinc boinc      4096 Nov 27 21:27 pilot3
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc       533 Nov 28 19:56 boinc_task_state.xml
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc 919607166 Nov 28 20:16 HITS.47556137._009272.pool.root.1
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc      1032 Nov 28 20:17 memory_monitor_summary.json
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc   1516240 Nov 28 20:18 agis_ddmendpoints.agis.ALL.json
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc   2437460 Nov 28 20:18 log.47556137._009272.job.log.tgz.1
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc        95 Nov 28 20:19 pilot_heartbeat.json
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc      8628 Nov 28 20:19 heartbeat.json
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc        29 Nov 28 20:20 wrapper_checkpoint.txt
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc      8192 Nov 28 20:20 boinc_mmap_file
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc       820 Nov 28 20:20 pilotlog.txt
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc  10987457 Nov 28 20:20 log.47556137._009272.job.log.1
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc       353 Nov 28 20:20 output.list
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc       620 Nov 28 20:20 runtime_log
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc  13445120 Nov 28 20:20 result.tar.gz
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc       662 Nov 28 20:20 YIGMDm6VYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCpIKDm4BH4ln.diag
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc      8833 Nov 28 20:20 runtime_log.err
[2025-11-28 20:20:26] -rw-r--r--. 1 boinc boinc     21385 Nov 28 20:20 stderr.txt
[2025-11-28 20:20:26] HITS file was successfully produced:
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc 919607166 Nov 28 20:16 shared/HITS.pool.root.1
[2025-11-28 20:20:26]  *** Contents of shared directory: ***
[2025-11-28 20:20:26] total 1310512
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc 408293933 Nov 27 21:23 ATLAS.root_0
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc     15847 Nov 27 21:23 start_atlas.sh
[2025-11-28 20:20:26] -rw-r--r--. 2 boinc boinc    590095 Nov 27 21:23 input.tar.gz
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc 919607166 Nov 28 20:16 HITS.pool.root.1
[2025-11-28 20:20:26] -rw-------. 1 boinc boinc  13445120 Nov 28 20:20 result.tar.gz
20:20:28 (9505): run_atlas exited; CPU time 310768.773433
20:20:28 (9505): called boinc_finish(0)

</stderr_txt>
]]>

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