Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
01:07:26 (945664): wrapper (7.7.26015): starting
01:07:26 (945664): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 01:07:26] Arguments: --nthreads 12
[2025-11-26 01:07:26] Threads: 12
[2025-11-26 01:07:26] Checking for CVMFS
[2025-11-26 01:07:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:07:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:07:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:07:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:07:27] 2.13.0.0 557766 2074 85984 153302 0 81 4443916 6144001 0 130560 0 1304041 99.984 79658 867 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 01:07:27] CVMFS is ok
[2025-11-26 01:07:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 01:07:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 01:07:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 01:07:27] Further information can be found at the LHC@home message board.
[2025-11-26 01:07:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:07:27] Checking for apptainer binary...
[2025-11-26 01:07:27] apptainer is not installed, using version from CVMFS
[2025-11-26 01:07:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:07:27] Debian-bookworm-latest-amd64-base
[2025-11-26 01:07:27] apptainer works
[2025-11-26 01:07:27] Set ATHENA_PROC_NUMBER=12
[2025-11-26 01:07:27] Set ATHENA_CORE_NUMBER=12
[2025-11-26 01:07:27] Starting ATLAS job with PandaID=6895559657
[2025-11-26 01:07:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:31:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:31:55] 2025-11-26 03:30:54,162 | INFO     | time since job start (12202s) is within the limit (172800.0s)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,623 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 04:31:55] 2025-11-26 03:30:54,624 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3814.4475625000005
[2025-11-26 04:31:55] 2025-11-26 03:30:54,626 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895559657/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,626 | INFO     | extracted standard info from prmon json
[2025-11-26 04:31:55] 2025-11-26 03:30:54,626 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:31:55] 2025-11-26 03:30:54,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:31:55] 2025-11-26 03:30:54,627 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | sum of square deviations: 2480549045.5000052
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | sum of deviations: 133626519414.74995
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | mean x: 1764121740.55
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | mean y: 3578188.275
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | intersect: -95029192254.71786
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | chi2: 3.5653637188455156
[2025-11-26 04:31:55] 2025-11-26 03:30:54,628 | INFO     | sum of square deviations: 2299116135.4871664
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | sum of deviations: 182265257908.2307
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | mean x: 1764121588.0512822
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | mean y: 3618672.476923077
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | intersect: -139849288827.3492
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | chi2: 1.8455827951466175
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | current chi2=1.8455827951466175 (change=48.23577787053301 %)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,629 | INFO     | sum of square deviations: 2126753162.9736893
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | sum of deviations: 172935171146.07907
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | mean x: 1764121435.5526316
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | mean y: 3610416.142105263
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | intersect: -143444462303.86786
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | chi2: 1.8432111764546801
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | current chi2=1.8432111764546801 (change=0.12850242742693932 %)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | right removable region: 189
[2025-11-26 04:31:55] 2025-11-26 03:30:54,630 | INFO     | sum of square deviations: 2299110035.4871664
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | sum of deviations: 76056884513.12817
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | mean x: 1764121893.0512822
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | mean y: 3626177.487179487
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | intersect: -58355309678.51325
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | chi2: 1.7908268618719818
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | current chi2=1.7908268618719818 (change=49.77155199044149 %)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | sum of square deviations: 2126740962.9736893
[2025-11-26 04:31:55] 2025-11-26 03:30:54,631 | INFO     | sum of deviations: 64657011246.05262
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | mean x: 1764122045.5526316
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | mean y: 3636262.694736842
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | intersect: -53629063217.17932
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | chi2: 1.7823654865786367
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | current chi2=1.7823654865786367 (change=0.4724842738007794 %)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | left removable region: 20
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | sum of square deviations: 1496641965.7869768
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | sum of deviations: 81243333316.99413
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | mean x: 1764122015.035503
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | mean y: 3696776.834319527
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | intersect: -95759455771.1522
[2025-11-26 04:31:55] 2025-11-26 03:30:54,632 | INFO     | chi2: 0.013431908014660073
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | current memory leak: 54.28 B/s (using 169 data points, chi2=0.01)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | could have reported an average CPU frequency of 3921 MHz (10 samples)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | ..............................
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . Timing measurements:
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . get job = 0 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . initial setup = 1 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . payload setup = 2 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . stage-in = 0 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . payload execution = 12172 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . stage-out = 1 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | . log creation = 0 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,633 | INFO     | ..............................
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | 
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | job summary report
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | --------------------------------------------------
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | PanDA job id: 6895559657
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | task id: 47556149
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | errors: (none)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:31:55] 2025-11-26 03:30:54,685 | INFO     | pilot state: finished 
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | transexitcode: 0
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | exeerrorcode: 0
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | exeerrordiag: 
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | exitcode: 0
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | exitmsg: OK
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | cpuconsumptiontime: 140472 s
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | nevents: 1000
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | neventsw: 0
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | pid: 956265
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | pgrp: 956265
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | corecount: 12
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | event service: False
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | sizes: {0: 2283487, 1: 2284350, 3: 2284612, 12: 2284640, 12179: 2315517, 12182: 2324525, 12186: 2324709, 12189: 2324955}
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | --------------------------------------------------
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | 
[2025-11-26 04:31:55] 2025-11-26 03:30:54,686 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | job 6895559657 has completed (purged errors)
[2025-11-26 04:31:55] 2025-11-26 03:30:54,699 | INFO     | overall cleanup function is called
[2025-11-26 04:31:55] 2025-11-26 03:30:55,711 | INFO     | --- collectZombieJob: --- 10, [956265]
[2025-11-26 04:31:55] 2025-11-26 03:30:55,712 | INFO     | zombie collector waiting for pid 956265
[2025-11-26 04:31:55] 2025-11-26 03:30:55,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:31:55] 2025-11-26 03:30:55,712 | INFO     | collected zombie processes
[2025-11-26 04:31:55] 2025-11-26 03:30:55,712 | INFO     | will attempt to kill all subprocesses of pid=956265
[2025-11-26 04:31:55] 2025-11-26 03:30:55,769 | INFO     | process IDs to be killed: [956265] (in reverse order)
[2025-11-26 04:31:55] 2025-11-26 03:30:55,793 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:31:55] 2025-11-26 03:30:55,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:31:55] 2025-11-26 03:30:55,794 | INFO     | did not find any defunct processes belonging to 956265
[2025-11-26 04:31:55] 2025-11-26 03:30:55,796 | INFO     | did not find any defunct processes belonging to 956265
[2025-11-26 04:31:55] 2025-11-26 03:30:55,797 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:31:55] 2025-11-26 03:30:55,797 | INFO     | ready for new job
[2025-11-26 04:31:55] 2025-11-26 03:30:55,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:31:55] 2025-11-26 03:30:55,799 | INFO     | ***************************************
[2025-11-26 04:31:55] 2025-11-26 03:30:55,799 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:31:55] 2025-11-26 03:30:55,799 | INFO     | ***************************************
[2025-11-26 04:31:55] 2025-11-26 03:30:55,799 | INFO     | 
[2025-11-26 04:31:55] 2025-11-26 03:30:55,800 | INFO     | architecture information:
[2025-11-26 04:31:55] 2025-11-26 03:30:55,800 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:31:55] 2025-11-26 03:30:55,811 | INFO     | cat /etc/os-release:
[2025-11-26 04:31:55] NAME="CentOS Linux"
[2025-11-26 04:31:55] VERSION="7 (Core)"
[2025-11-26 04:31:55] ID="centos"
[2025-11-26 04:31:55] ID_LIKE="rhel fedora"
[2025-11-26 04:31:55] VERSION_ID="7"
[2025-11-26 04:31:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:31:55] ANSI_COLOR="0;31"
[2025-11-26 04:31:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:31:55] HOME_URL="https://www.centos.org/"
[2025-11-26 04:31:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:31:55] 
[2025-11-26 04:31:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:31:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:31:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:31:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:31:55] 
[2025-11-26 04:31:55] 2025-11-26 03:30:55,811 | INFO     | ***************************************
[2025-11-26 04:31:55] 2025-11-26 03:30:56,314 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | INFO     | sufficient remaining disk space (756909342720 B)
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | INFO     | update_server=False
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:31:55] 2025-11-26 03:30:56,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:31:55] 2025-11-26 03:30:56,486 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 04:31:55] 2025-11-26 03:30:56,486 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 04:31:55] 2025-11-26 03:30:56,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:31:55] 2025-11-26 03:30:56,486 | INFO     | will abort loop
[2025-11-26 04:31:55] 2025-11-26 03:30:57,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:31:55] 2025-11-26 03:30:57,335 | INFO     | all job control threads have been joined
[2025-11-26 04:31:55] 2025-11-26 03:30:57,336 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:57,336 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:57,403 | INFO     | all data control threads have been joined
[2025-11-26 04:31:55] 2025-11-26 03:30:57,492 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:57,548 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:57,622 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:57,708 | INFO     | all payload control threads have been joined
[2025-11-26 04:31:55] 2025-11-26 03:30:57,778 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,002 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,034 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,056 | INFO     | [job] validate thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,336 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,340 | INFO     | [job] control thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,408 | INFO     | [data] control thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,505 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:30:58,714 | INFO     | [payload] control thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:31:01,122 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:31:07,317 | INFO     | job.realtimelogging is not enabled
[2025-11-26 04:31:55] 2025-11-26 03:31:08,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:31:55] 2025-11-26 03:31:27,329 | INFO     | PID=949507 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 04:31:55] 2025-11-26 03:31:27,329 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:31:55] 2025-11-26 03:31:27,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:31:55] 2025-11-26 03:31:27,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:31:55] 2025-11-26 03:31:50,362 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:31:55] 2025-11-26 03:31:50,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359545493312)>', '<ExcThread(monitor, started 140359145330432)>']
[2025-11-26 04:31:55] 2025-11-26 03:31:51,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:31:55] 2025-11-26 03:31:51,451 | INFO     | [monitor] control thread has ended
[2025-11-26 04:31:55] 2025-11-26 03:31:55,779 | INFO     | all workflow threads have been joined
[2025-11-26 04:31:55] 2025-11-26 03:31:55,779 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:31:55] 2025-11-26 03:31:55,780 | INFO     | traces error code: 0
[2025-11-26 04:31:55] 2025-11-26 03:31:55,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:31:55] 2025-11-26 03:31:55,846 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:31:55] 2025-11-26 03:31:55,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:31:55] 2025-11-26 03:31:55,851 [wrapper] pilotpid: 949507
[2025-11-26 04:31:55] 2025-11-26 03:31:55,853 [wrapper] Pilot exit status: 0
[2025-11-26 04:31:55] 2025-11-26 03:31:55,860 [wrapper] pandaids: 6895559657
[2025-11-26 04:31:55] 2025-11-26 03:31:55,875 [wrapper] cleanup supervisor_pilot  981947 949508
[2025-11-26 04:31:55] 2025-11-26 03:31:55,876 [wrapper] Test setup, not cleaning
[2025-11-26 04:31:55] 2025-11-26 03:31:55,878 [wrapper] apfmon messages muted
[2025-11-26 04:31:55] 2025-11-26 03:31:55,879 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:31:55] 2025-11-26 03:31:55,881 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:31:55]  *** Error codes and diagnostics ***
[2025-11-26 04:31:55]     "exeErrorCode": 0,
[2025-11-26 04:31:55]     "exeErrorDiag": "",
[2025-11-26 04:31:55]     "pilotErrorCode": 0,
[2025-11-26 04:31:55]     "pilotErrorDiag": "",
[2025-11-26 04:31:55]  *** Listing of results directory ***
[2025-11-26 04:31:55] total 1321620
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc    576529 Nov 24 11:13 pilot3.tar.gz
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc      5112 Nov 24 11:51 queuedata.json
[2025-11-26 04:31:55] -rwx------ 1 boinc boinc     36292 Nov 24 11:51 runpilot2-wrapper.sh
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc       100 Nov 26 01:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:31:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 01:07 run_atlas
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc       105 Nov 26 01:07 job.xml
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:07 start_atlas.sh
[2025-11-26 04:31:55] drwxrwx--x 2 boinc boinc      4096 Nov 26 01:07 shared
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:07 input.tar.gz
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc      6729 Nov 26 01:07 init_data.xml
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc 409280678 Nov 26 01:07 EVNT.47483658._001311.pool.root.1
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 01:07 boinc_lockfile
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc      2786 Nov 26 01:07 pandaJob.out
[2025-11-26 04:31:55] -rw------- 1 boinc boinc    991877 Nov 26 01:07 agis_schedconf.cvmfs.json
[2025-11-26 04:31:55] drwx------ 5 boinc boinc      4096 Nov 26 01:07 pilot3
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc       532 Nov 26 04:26 boinc_task_state.xml
[2025-11-26 04:31:55] -rw------- 1 boinc boinc 932766714 Nov 26 04:30 HITS.47556149._002974.pool.root.1
[2025-11-26 04:31:55] -rw------- 1 boinc boinc      1026 Nov 26 04:30 memory_monitor_summary.json
[2025-11-26 04:31:55] -rw------- 1 boinc boinc        95 Nov 26 04:30 pilot_heartbeat.json
[2025-11-26 04:31:55] -rw------- 1 boinc boinc   1516240 Nov 26 04:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:31:55] -rw------- 1 boinc boinc   1933957 Nov 26 04:30 log.47556149._002974.job.log.tgz.1
[2025-11-26 04:31:55] -rw------- 1 boinc boinc      8606 Nov 26 04:30 heartbeat.json
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc      8192 Nov 26 04:31 boinc_mmap_file
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc        29 Nov 26 04:31 wrapper_checkpoint.txt
[2025-11-26 04:31:55] -rw------- 1 boinc boinc      5013 Nov 26 04:31 pilotlog.txt
[2025-11-26 04:31:55] -rw------- 1 boinc boinc   1751587 Nov 26 04:31 log.47556149._002974.job.log.1
[2025-11-26 04:31:55] -rw------- 1 boinc boinc       353 Nov 26 04:31 output.list
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc       620 Nov 26 04:31 runtime_log
[2025-11-26 04:31:55] -rw------- 1 boinc boinc   3706880 Nov 26 04:31 result.tar.gz
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc      9133 Nov 26 04:31 runtime_log.err
[2025-11-26 04:31:55] -rw------- 1 boinc boinc       713 Nov 26 04:31 h9LKDmvLjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma1IKDm7Q5iIm.diag
[2025-11-26 04:31:55] -rw-r--r-- 1 boinc boinc     21410 Nov 26 04:31 stderr.txt
[2025-11-26 04:31:55] HITS file was successfully produced:
[2025-11-26 04:31:55] -rw------- 1 boinc boinc 932766714 Nov 26 04:30 shared/HITS.pool.root.1
[2025-11-26 04:31:55]  *** Contents of shared directory: ***
[2025-11-26 04:31:55] total 1314820
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 01:07 start_atlas.sh
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc    590106 Nov 26 01:07 input.tar.gz
[2025-11-26 04:31:55] -rw-r--r-- 2 boinc boinc 409280678 Nov 26 01:07 ATLAS.root_0
[2025-11-26 04:31:55] -rw------- 1 boinc boinc 932766714 Nov 26 04:30 HITS.pool.root.1
[2025-11-26 04:31:55] -rw------- 1 boinc boinc   3706880 Nov 26 04:31 result.tar.gz
04:31:57 (945664): run_atlas exited; CPU time 140309.934482
04:31:57 (945664): called boinc_finish(0)

</stderr_txt>
]]>

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