Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:29 (118714): wrapper (7.7.26015): starting
11:19:29 (118714): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 11:19:29] Arguments: --nthreads 3
[2025-11-25 11:19:29] Threads: 3
[2025-11-25 11:19:29] Checking for CVMFS
[2025-11-25 11:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:19:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:19:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:19:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:19:29] 2.9.2.0 4187037 34 58316 153279 2 16 35150957 36864001 0 130560 0 375664 99.996 4040 20824 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 11:19:29] CVMFS is ok
[2025-11-25 11:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:19:29] Further information can be found at the LHC@home message board.
[2025-11-25 11:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:19:29] Checking for apptainer binary...
[2025-11-25 11:19:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:19:29] Running /usr/bin/apptainer --version
[2025-11-25 11:19:29] apptainer version 1.4.1-1.1
[2025-11-25 11:19:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:19:30] thA335
[2025-11-25 11:19:30] apptainer works
[2025-11-25 11:19:30] Set ATHENA_PROC_NUMBER=3
[2025-11-25 11:19:30] Set ATHENA_CORE_NUMBER=3
[2025-11-25 11:19:30] Starting ATLAS job with PandaID=6895559482
[2025-11-25 11:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:23:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:23:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:23:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:23:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:23:47] 
[2025-11-25 11:23:47] 2025-11-25 10:22:54,361 | INFO     | ***************************************
[2025-11-25 11:23:47] 2025-11-25 10:22:54,865 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | INFO     | sufficient remaining disk space (826880819200 B)
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | INFO     | update_server=False
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:23:47] 2025-11-25 10:22:54,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:23:47] 2025-11-25 10:22:54,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:23:47] 2025-11-25 10:22:54,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:23:47] 2025-11-25 10:22:55,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:23:47] 2025-11-25 10:22:55,169 | INFO     | aborting loop
[2025-11-25 11:23:47] 2025-11-25 10:22:55,667 | INFO     | all payload control threads have been joined
[2025-11-25 11:23:47] 2025-11-25 10:22:55,764 | INFO     | all data control threads have been joined
[2025-11-25 11:23:47] 2025-11-25 10:22:55,884 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:55,885 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:55,991 | INFO     | all job control threads have been joined
[2025-11-25 11:23:47] 2025-11-25 10:22:56,174 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,196 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,479 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,648 | INFO     | [job] validate thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,673 | INFO     | [payload] control thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,748 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,770 | INFO     | [data] control thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,789 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,885 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,931 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,967 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:56,996 | INFO     | [job] control thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:57,307 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:22:58,885 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:23:47] 2025-11-25 10:23:24,449 | INFO     | PID=122450 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:23:47] 2025-11-25 10:23:24,449 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:23:47] 2025-11-25 10:23:24,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:23:47] 2025-11-25 10:23:24,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:23:47] 2025-11-25 10:23:41,450 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:23:47] 2025-11-25 10:23:42,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267118700352)>', '<ExcThread(monitor, started 140266602206976)>']
[2025-11-25 11:23:47] 2025-11-25 10:23:42,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:23:47] 2025-11-25 10:23:42,540 | INFO     | [monitor] control thread has ended
[2025-11-25 11:23:47] 2025-11-25 10:23:47,482 | INFO     | all workflow threads have been joined
[2025-11-25 11:23:47] 2025-11-25 10:23:47,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:23:47] 2025-11-25 10:23:47,483 | INFO     | traces error code: 0
[2025-11-25 11:23:47] 2025-11-25 10:23:47,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:23:47] 2025-11-25 10:23:47,527 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:23:47] 2025-11-25 10:23:47,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:23:47] 2025-11-25 10:23:47,533 [wrapper] pilotpid: 122450
[2025-11-25 11:23:47] 2025-11-25 10:23:47,535 [wrapper] Pilot exit status: 0
[2025-11-25 11:23:47] 2025-11-25 10:23:47,542 [wrapper] pandaids: 6895559482
[2025-11-25 11:23:47] 2025-11-25 10:23:47,558 [wrapper] cleanup supervisor_pilot  122456 122451
[2025-11-25 11:23:47] 2025-11-25 10:23:47,560 [wrapper] Test setup, not cleaning
[2025-11-25 11:23:47] 2025-11-25 10:23:47,563 [wrapper] apfmon messages muted
[2025-11-25 11:23:47] 2025-11-25 10:23:47,565 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:23:47] 2025-11-25 10:23:47,568 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:23:47]  *** Error codes and diagnostics ***
[2025-11-25 11:23:47]     "exeErrorCode": 65,
[2025-11-25 11:23:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:23:47]     "pilotErrorCode": 1305,
[2025-11-25 11:23:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:23:47]  *** Listing of results directory ***
[2025-11-25 11:23:47] total 405004
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc    576529 Nov 24 11:13 pilot3.tar.gz
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      5112 Nov 24 11:42 queuedata.json
[2025-11-25 11:23:47] -rwx------ 1 boinc boinc     36292 Nov 24 11:45 runpilot2-wrapper.sh
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc       100 Nov 25 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:23:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 11:19 run_atlas
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc       105 Nov 25 11:19 job.xml
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc 410532111 Nov 25 11:19 EVNT.47483658._002034.pool.root.1
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc    590107 Nov 25 11:19 input.tar.gz
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:19 start_atlas.sh
[2025-11-25 11:23:47] drwxrwx--x 2 boinc boinc      4096 Nov 25 11:19 shared
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:19 boinc_setup_complete
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      6196 Nov 25 11:19 init_data.xml
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:19 boinc_lockfile
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      2784 Nov 25 11:19 pandaJob.out
[2025-11-25 11:23:47] -rw------- 1 boinc boinc    991894 Nov 25 11:19 agis_schedconf.cvmfs.json
[2025-11-25 11:23:47] -rw------- 1 boinc boinc   1516240 Nov 25 11:19 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:23:47] drwx------ 5 boinc boinc      4096 Nov 25 11:19 pilot3
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc       523 Nov 25 11:20 boinc_task_state.xml
[2025-11-25 11:23:47] -rw------- 1 boinc boinc       939 Nov 25 11:20 memory_monitor_summary.json
[2025-11-25 11:23:47] -rw------- 1 boinc boinc     55580 Nov 25 11:20 log.47556161._000176.job.log.tgz.1
[2025-11-25 11:23:47] -rw------- 1 boinc boinc        95 Nov 25 11:22 pilot_heartbeat.json
[2025-11-25 11:23:47] -rw------- 1 boinc boinc      8402 Nov 25 11:22 heartbeat.json
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:23 boinc_mmap_file
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc        23 Nov 25 11:23 wrapper_checkpoint.txt
[2025-11-25 11:23:47] -rw------- 1 boinc boinc      4751 Nov 25 11:23 pilotlog.txt
[2025-11-25 11:23:47] -rw------- 1 boinc boinc     93108 Nov 25 11:23 log.47556161._000176.job.log.1
[2025-11-25 11:23:47] -rw------- 1 boinc boinc       186 Nov 25 11:23 output.list
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:23 runtime_log
[2025-11-25 11:23:47] -rw------- 1 boinc boinc    163840 Nov 25 11:23 result.tar.gz
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      8744 Nov 25 11:23 runtime_log.err
[2025-11-25 11:23:47] -rw------- 1 boinc boinc       649 Nov 25 11:23 jBGODm6Fjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9bLKDmMGdtGm.diag
[2025-11-25 11:23:47] -rw-r--r-- 1 boinc boinc      8522 Nov 25 11:23 stderr.txt
[2025-11-25 11:23:47] No HITS result produced
[2025-11-25 11:23:47]  *** Contents of shared directory: ***
[2025-11-25 11:23:47] total 401672
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc 410532111 Nov 25 11:19 ATLAS.root_0
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc    590107 Nov 25 11:19 input.tar.gz
[2025-11-25 11:23:47] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:19 start_atlas.sh
[2025-11-25 11:23:47] -rw------- 1 boinc boinc    163840 Nov 25 11:23 result.tar.gz
11:23:49 (118714): run_atlas exited; CPU time 31.882205
11:23:49 (118714): called boinc_finish(0)

</stderr_txt>
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