Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:29 (7728): wrapper (7.7.26015): starting
03:58:29 (7728): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 03:58:29] Arguments: --nthreads 12
[2025-11-25 03:58:29] Threads: 12
[2025-11-25 03:58:29] Checking for CVMFS
[2025-11-25 03:58:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:58:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:58:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:58:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:58:30] 2.11.2.0 3035 285986 96604 153276 2 81 16547979 20275200 1 130560 3 128365404 99.968 17044549 14247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:58:30] CVMFS is ok
[2025-11-25 03:58:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:58:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:58:30] Further information can be found at the LHC@home message board.
[2025-11-25 03:58:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:58:30] Checking for apptainer binary...
[2025-11-25 03:58:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:58:30] Running /usr/bin/apptainer --version
[2025-11-25 03:58:30] apptainer version 1.3.2-1.el7
[2025-11-25 03:58:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:58:31] c-205-31.aglt2.org
[2025-11-25 03:58:31] apptainer works
[2025-11-25 03:58:31] Set ATHENA_PROC_NUMBER=12
[2025-11-25 03:58:31] Set ATHENA_CORE_NUMBER=12
[2025-11-25 03:58:31] Starting ATLAS job with PandaID=6896243536
[2025-11-25 03:58:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:11:50]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:11:50] 2025-11-25 16:11:15,076 | INFO     | time since job start (25949s) is within the limit (172800.0s)
[2025-11-25 11:11:50] 2025-11-25 16:11:17,015 | INFO     | monitor loop #1942: job 0:6896243536 is in state 'finished'
[2025-11-25 11:11:50] 2025-11-25 16:11:17,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:11:50] 2025-11-25 16:11:17,081 | INFO     | time since job start (25951s) is within the limit (172800.0s)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,423 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 11:11:50] 2025-11-25 16:11:18,426 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-11-25 11:11:50] 2025-11-25 16:11:18,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896243536/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,429 | INFO     | extracted standard info from prmon json
[2025-11-25 11:11:50] 2025-11-25 16:11:18,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:11:50] 2025-11-25 16:11:18,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:11:50] 2025-11-25 16:11:18,436 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:11:50] 2025-11-25 16:11:18,437 | INFO     | sum of square deviations: 23803895992.941124
[2025-11-25 11:11:50] 2025-11-25 16:11:18,441 | INFO     | sum of deviations: 413356774151.65894
[2025-11-25 11:11:50] 2025-11-25 16:11:18,441 | INFO     | mean x: 1764074087.2117648
[2025-11-25 11:11:50] 2025-11-25 16:11:18,441 | INFO     | mean y: 3435698.548235294
[2025-11-25 11:11:50] 2025-11-25 16:11:18,441 | INFO     | intersect: -30629867953.53561
[2025-11-25 11:11:50] 2025-11-25 16:11:18,442 | INFO     | chi2: 5.131709297586612
[2025-11-25 11:11:50] 2025-11-25 16:11:18,442 | INFO     | sum of square deviations: 22973638107.714336
[2025-11-25 11:11:50] 2025-11-25 16:11:18,446 | INFO     | sum of deviations: 557109245645.5713
[2025-11-25 11:11:50] 2025-11-25 16:11:18,446 | INFO     | mean x: 1764073934.7142856
[2025-11-25 11:11:50] 2025-11-25 16:11:18,446 | INFO     | mean y: 3462060.8214285714
[2025-11-25 11:11:50] 2025-11-25 16:11:18,446 | INFO     | intersect: -42775217329.1739
[2025-11-25 11:11:50] 2025-11-25 16:11:18,447 | INFO     | chi2: 2.637613055776906
[2025-11-25 11:11:50] 2025-11-25 16:11:18,447 | INFO     | current chi2=2.637613055776906 (change=48.60166656327654 %)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,447 | INFO     | sum of square deviations: 22162890095.913246
[2025-11-25 11:11:50] 2025-11-25 16:11:18,451 | INFO     | sum of deviations: 588094481727.7681
[2025-11-25 11:11:50] 2025-11-25 16:11:18,451 | INFO     | mean x: 1764073782.2144578
[2025-11-25 11:11:50] 2025-11-25 16:11:18,451 | INFO     | mean y: 3467855.238554217
[2025-11-25 11:11:50] 2025-11-25 16:11:18,451 | INFO     | intersect: -46806404512.09568
[2025-11-25 11:11:50] 2025-11-25 16:11:18,452 | INFO     | chi2: 2.357961965446977
[2025-11-25 11:11:50] 2025-11-25 16:11:18,452 | INFO     | current chi2=2.357961965446977 (change=10.602430470892488 %)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,452 | INFO     | right removable region: 414
[2025-11-25 11:11:50] 2025-11-25 16:11:18,453 | INFO     | sum of square deviations: 22973583207.714344
[2025-11-25 11:11:50] 2025-11-25 16:11:18,456 | INFO     | sum of deviations: 280855539485.2859
[2025-11-25 11:11:50] 2025-11-25 16:11:18,457 | INFO     | mean x: 1764074239.7142856
[2025-11-25 11:11:50] 2025-11-25 16:11:18,457 | INFO     | mean y: 3459948.4023809526
[2025-11-25 11:11:50] 2025-11-25 16:11:18,457 | INFO     | intersect: -21562615217.47262
[2025-11-25 11:11:50] 2025-11-25 16:11:18,457 | INFO     | chi2: 2.918185828905208
[2025-11-25 11:11:50] 2025-11-25 16:11:18,457 | INFO     | current chi2=2.918185828905208 (change=43.13423345555448 %)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,458 | INFO     | sum of square deviations: 22162831413.913246
[2025-11-25 11:11:50] 2025-11-25 16:11:18,461 | INFO     | sum of deviations: 248769242435.39023
[2025-11-25 11:11:50] 2025-11-25 16:11:18,462 | INFO     | mean x: 1764074392.2144578
[2025-11-25 11:11:50] 2025-11-25 16:11:18,462 | INFO     | mean y: 3465976.534939759
[2025-11-25 11:11:50] 2025-11-25 16:11:18,462 | INFO     | intersect: -19797589310.803715
[2025-11-25 11:11:50] 2025-11-25 16:11:18,462 | INFO     | chi2: 2.871088454135
[2025-11-25 11:11:50] 2025-11-25 16:11:18,462 | INFO     | current chi2=2.871088454135 (change=1.6139265122768705 %)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,463 | INFO     | left removable region: 20
[2025-11-25 11:11:50] 2025-11-25 16:11:18,463 | INFO     | sum of square deviations: 18965762942.162464
[2025-11-25 11:11:50] 2025-11-25 16:11:18,466 | INFO     | sum of deviations: 379798468029.5334
[2025-11-25 11:11:50] 2025-11-25 16:11:18,467 | INFO     | mean x: 1764074361.7157362
[2025-11-25 11:11:50] 2025-11-25 16:11:18,467 | INFO     | mean y: 3507679.3172588833
[2025-11-25 11:11:50] 2025-11-25 16:11:18,467 | INFO     | intersect: -35322924593.03621
[2025-11-25 11:11:50] 2025-11-25 16:11:18,467 | INFO     | chi2: 0.05858759942242745
[2025-11-25 11:11:50] 2025-11-25 16:11:18,467 | INFO     | current memory leak: 20.03 B/s (using 394 data points, chi2=0.06)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | could have reported an average CPU frequency of 2400 MHz (18 samples)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | ..............................
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | . Timing measurements:
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | . get job = 0 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | . initial setup = 2 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | . payload setup = 7 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,468 | INFO     | . stage-in = 0 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,469 | INFO     | . payload execution = 25917 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,469 | INFO     | . stage-out = 3 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,469 | INFO     | . log creation = 0 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,469 | INFO     | ..............................
[2025-11-25 11:11:50] 2025-11-25 16:11:18,553 | INFO     | 
[2025-11-25 11:11:50] 2025-11-25 16:11:18,553 | INFO     | job summary report
[2025-11-25 11:11:50] 2025-11-25 16:11:18,553 | INFO     | --------------------------------------------------
[2025-11-25 11:11:50] 2025-11-25 16:11:18,553 | INFO     | PanDA job id: 6896243536
[2025-11-25 11:11:50] 2025-11-25 16:11:18,553 | INFO     | task id: 47556161
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | errors: (none)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | pilot state: finished 
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | transexitcode: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | exeerrorcode: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:18,554 | INFO     | exeerrordiag: 
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | exitcode: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | exitmsg: OK
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | cpuconsumptiontime: 297740 s
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | nevents: 1000
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | neventsw: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | pid: 17830
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | pgrp: 17830
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | corecount: 12
[2025-11-25 11:11:50] 2025-11-25 16:11:18,555 | INFO     | event service: False
[2025-11-25 11:11:50] 2025-11-25 16:11:18,556 | INFO     | sizes: {0: 2284262, 5: 2284524, 11: 2284580, 25924: 2321872, 25928: 2330866, 25930: 2330950, 25936: 2331324}
[2025-11-25 11:11:50] 2025-11-25 16:11:18,556 | INFO     | --------------------------------------------------
[2025-11-25 11:11:50] 2025-11-25 16:11:18,556 | INFO     | 
[2025-11-25 11:11:50] 2025-11-25 16:11:18,556 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 11:11:50] 2025-11-25 16:11:18,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,580 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:11:50] 2025-11-25 16:11:18,583 | INFO     | job 6896243536 has completed (purged errors)
[2025-11-25 11:11:50] 2025-11-25 16:11:18,583 | INFO     | overall cleanup function is called
[2025-11-25 11:11:50] 2025-11-25 16:11:19,599 | INFO     | --- collectZombieJob: --- 10, [17830]
[2025-11-25 11:11:50] 2025-11-25 16:11:19,599 | INFO     | zombie collector waiting for pid 17830
[2025-11-25 11:11:50] 2025-11-25 16:11:19,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:11:50] 2025-11-25 16:11:19,600 | INFO     | collected zombie processes
[2025-11-25 11:11:50] 2025-11-25 16:11:19,600 | INFO     | will attempt to kill all subprocesses of pid=17830
[2025-11-25 11:11:50] 2025-11-25 16:11:19,691 | INFO     | process IDs to be killed: [17830] (in reverse order)
[2025-11-25 11:11:50] 2025-11-25 16:11:19,746 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:11:50] 2025-11-25 16:11:19,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:11:50] 2025-11-25 16:11:19,750 | INFO     | did not find any defunct processes belonging to 17830
[2025-11-25 11:11:50] 2025-11-25 16:11:19,754 | INFO     | did not find any defunct processes belonging to 17830
[2025-11-25 11:11:50] 2025-11-25 16:11:19,756 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:11:50] 2025-11-25 16:11:19,756 | INFO     | ready for new job
[2025-11-25 11:11:50] 2025-11-25 16:11:19,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:11:50] 2025-11-25 16:11:19,758 | INFO     | ***************************************
[2025-11-25 11:11:50] 2025-11-25 16:11:19,758 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:11:50] 2025-11-25 16:11:19,759 | INFO     | ***************************************
[2025-11-25 11:11:50] 2025-11-25 16:11:19,759 | INFO     | 
[2025-11-25 11:11:50] 2025-11-25 16:11:19,759 | INFO     | architecture information:
[2025-11-25 11:11:50] 2025-11-25 16:11:19,760 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:11:50] 2025-11-25 16:11:19,775 | INFO     | cat /etc/os-release:
[2025-11-25 11:11:50] NAME="CentOS Linux"
[2025-11-25 11:11:50] VERSION="7 (Core)"
[2025-11-25 11:11:50] ID="centos"
[2025-11-25 11:11:50] ID_LIKE="rhel fedora"
[2025-11-25 11:11:50] VERSION_ID="7"
[2025-11-25 11:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:11:50] ANSI_COLOR="0;31"
[2025-11-25 11:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:11:50] HOME_URL="https://www.centos.org/"
[2025-11-25 11:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:11:50] 
[2025-11-25 11:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:11:50] 
[2025-11-25 11:11:50] 2025-11-25 16:11:19,775 | INFO     | ***************************************
[2025-11-25 11:11:50] 2025-11-25 16:11:20,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 11:11:50] 2025-11-25 16:11:20,295 | INFO     | sufficient remaining disk space (28239200256 B)
[2025-11-25 11:11:50] 2025-11-25 16:11:20,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:11:50] 2025-11-25 16:11:20,296 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:11:50] 2025-11-25 16:11:20,296 | INFO     | update_server=False
[2025-11-25 11:11:50] 2025-11-25 16:11:20,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:11:50] 2025-11-25 16:11:20,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:11:50] 2025-11-25 16:11:20,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:11:50] 2025-11-25 16:11:20,408 | INFO     | all data control threads have been joined
[2025-11-25 11:11:50] 2025-11-25 16:11:20,488 | INFO     | all job control threads have been joined
[2025-11-25 11:11:50] 2025-11-25 16:11:20,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:11:50] 2025-11-25 16:11:20,523 | INFO     | aborting loop
[2025-11-25 11:11:50] 2025-11-25 16:11:21,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:11:50] 2025-11-25 16:11:21,291 | INFO     | all payload control threads have been joined
[2025-11-25 11:11:50] 2025-11-25 16:11:21,302 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,303 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,414 | INFO     | [data] control thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,494 | INFO     | [job] control thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,529 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,730 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,756 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:21,757 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,297 | INFO     | [payload] control thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,388 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,404 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,759 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:22,791 | INFO     | [job] validate thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:23,214 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:24,303 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:11:50] 2025-11-25 16:11:28,576 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:11:50] 2025-11-25 16:11:29,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515986892608)>', '<ExcThread(monitor, started 140514854680320)>']
[2025-11-25 11:11:50] 2025-11-25 16:11:34,457 | INFO     | all workflow threads have been joined
[2025-11-25 11:11:50] 2025-11-25 16:11:34,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:11:50] 2025-11-25 16:11:34,458 | INFO     | traces error code: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:34,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:11:50] 2025-11-25 16:11:50,286 | INFO     | PID=11413 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 11:11:50] 2025-11-25 16:11:50,287 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:11:50] 2025-11-25 16:11:50,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:11:50] 2025-11-25 16:11:50,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:11:50] 2025-11-25 16:11:50,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:11:50] 2025-11-25 16:11:50,287 | INFO     | [monitor] control thread has ended
[2025-11-25 11:11:50] 2025-11-25 16:11:50,379 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:11:50] 2025-11-25 16:11:50,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:11:50] 2025-11-25 16:11:50,387 [wrapper] pilotpid: 11413
[2025-11-25 11:11:50] 2025-11-25 16:11:50,391 [wrapper] Pilot exit status: 0
[2025-11-25 11:11:50] 2025-11-25 16:11:50,405 [wrapper] pandaids: 6896243536
[2025-11-25 11:11:50] 2025-11-25 16:11:50,446 [wrapper] cleanup supervisor_pilot  7305 11414
[2025-11-25 11:11:50] 2025-11-25 16:11:50,449 [wrapper] Test setup, not cleaning
[2025-11-25 11:11:50] 2025-11-25 16:11:50,453 [wrapper] apfmon messages muted
[2025-11-25 11:11:50] 2025-11-25 16:11:50,457 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:11:50] 2025-11-25 16:11:50,461 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:11:50]  *** Error codes and diagnostics ***
[2025-11-25 11:11:50]     "exeErrorCode": 0,
[2025-11-25 11:11:50]     "exeErrorDiag": "",
[2025-11-25 11:11:50]     "pilotErrorCode": 0,
[2025-11-25 11:11:50]     "pilotErrorDiag": "",
[2025-11-25 11:11:50]  *** Listing of results directory ***
[2025-11-25 11:11:50] total 1322580
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 16:08 pilot3.tar.gz
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 16:56 queuedata.json
[2025-11-25 11:11:50] -rwx------ 1 boincer umatlas     36292 Nov 24 16:58 runpilot2-wrapper.sh
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas       100 Nov 25 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:11:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 03:58 run_atlas
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas       105 Nov 25 03:58 job.xml
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas 409318488 Nov 25 03:58 EVNT.47483658._002064.pool.root.1
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:58 start_atlas.sh
[2025-11-25 11:11:50] drwxrwx--x 2 boincer umatlas      4096 Nov 25 03:58 shared
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 03:58 input.tar.gz
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas         0 Nov 25 03:58 boinc_lockfile
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 03:58 pandaJob.out
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas        57 Nov 25 03:58 setup.sh.local
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas    991858 Nov 25 03:58 agis_schedconf.cvmfs.json
[2025-11-25 11:11:50] drwx------ 5 boincer umatlas      4096 Nov 25 03:58 pilot3
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 11:00 init_data.xml
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas       532 Nov 25 11:01 boinc_task_state.xml
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas 929472547 Nov 25 11:10 HITS.47556161._000475.pool.root.1
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas        95 Nov 25 11:10 pilot_heartbeat.json
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas      1062 Nov 25 11:11 memory_monitor_summary.json
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas   1516240 Nov 25 11:11 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas   2172961 Nov 25 11:11 log.47556161._000475.job.log.tgz.1
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas      8660 Nov 25 11:11 heartbeat.json
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas        29 Nov 25 11:11 wrapper_checkpoint.txt
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 11:11 boinc_mmap_file
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas       745 Nov 25 11:11 pilotlog.txt
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas   3632113 Nov 25 11:11 log.47556161._000475.job.log.1
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas       353 Nov 25 11:11 output.list
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas       620 Nov 25 11:11 runtime_log
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas   5826560 Nov 25 11:11 result.tar.gz
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas       670 Nov 25 11:11 ZQbNDm7kth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmowLKDmazp6Do.diag
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 11:11 runtime_log.err
[2025-11-25 11:11:50] -rw-r--r-- 1 boincer umatlas     21314 Nov 25 11:11 stderr.txt
[2025-11-25 11:11:50] HITS file was successfully produced:
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas 929472547 Nov 25 11:10 shared/HITS.pool.root.1
[2025-11-25 11:11:50]  *** Contents of shared directory: ***
[2025-11-25 11:11:50] total 1313712
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas 409318488 Nov 25 03:58 ATLAS.root_0
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:58 start_atlas.sh
[2025-11-25 11:11:50] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 03:58 input.tar.gz
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas 929472547 Nov 25 11:10 HITS.pool.root.1
[2025-11-25 11:11:50] -rw------- 1 boincer umatlas   5826560 Nov 25 11:11 result.tar.gz
11:11:51 (7728): run_atlas exited; CPU time 290921.262806
11:11:51 (7728): called boinc_finish(0)

</stderr_txt>
]]>

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