Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:15:05 (97874): wrapper (7.7.26015): starting
11:15:05 (97874): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 11:15:05] Arguments: --nthreads 3
[2025-11-25 11:15:05] Threads: 3
[2025-11-25 11:15:05] Checking for CVMFS
[2025-11-25 11:15:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:15:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:15:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:15:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:15:06] 2.9.2.0 4187037 29 56436 153278 2 16 35147816 36864001 0 130560 0 313075 99.997 2735 16377 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 11:15:06] CVMFS is ok
[2025-11-25 11:15:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:15:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:15:06] Further information can be found at the LHC@home message board.
[2025-11-25 11:15:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:15:06] Checking for apptainer binary...
[2025-11-25 11:15:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:15:06] Running /usr/bin/apptainer --version
[2025-11-25 11:15:06] apptainer version 1.4.1-1.1
[2025-11-25 11:15:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:15:06] thA335
[2025-11-25 11:15:06] apptainer works
[2025-11-25 11:15:06] Set ATHENA_PROC_NUMBER=3
[2025-11-25 11:15:06] Set ATHENA_CORE_NUMBER=3
[2025-11-25 11:15:06] Starting ATLAS job with PandaID=6895559441
[2025-11-25 11:15:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:19:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:19:24] 2025-11-25 10:18:31,194 | INFO     | [payload] control thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:31,252 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:31,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:31,605 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:31,695 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:31,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:19:24] 2025-11-25 10:18:31,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:32,091 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:35,863 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:19:24] 2025-11-25 10:18:59,789 | INFO     | PID=101613 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:19:24] 2025-11-25 10:18:59,789 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:19:24] 2025-11-25 10:18:59,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:19:24] 2025-11-25 10:18:59,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:19:24] 2025-11-25 10:19:18,807 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:19:24] 2025-11-25 10:19:19,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278297904960)>', '<ExcThread(monitor, started 140277566129920)>']
[2025-11-25 11:19:24] 2025-11-25 10:19:19,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:19:24] 2025-11-25 10:19:19,894 | INFO     | [monitor] control thread has ended
[2025-11-25 11:19:24] 2025-11-25 10:19:24,748 | INFO     | all workflow threads have been joined
[2025-11-25 11:19:24] 2025-11-25 10:19:24,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:19:24] 2025-11-25 10:19:24,749 | INFO     | traces error code: 0
[2025-11-25 11:19:24] 2025-11-25 10:19:24,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:19:24] 2025-11-25 10:19:24,801 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:19:24] 2025-11-25 10:19:24,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:19:24] 2025-11-25 10:19:24,807 [wrapper] pilotpid: 101613
[2025-11-25 11:19:24] 2025-11-25 10:19:24,809 [wrapper] Pilot exit status: 0
[2025-11-25 11:19:24] 2025-11-25 10:19:24,816 [wrapper] pandaids: 6895559441
[2025-11-25 11:19:24] 2025-11-25 10:19:24,834 [wrapper] cleanup supervisor_pilot  101619 101614
[2025-11-25 11:19:24] 2025-11-25 10:19:24,837 [wrapper] Test setup, not cleaning
[2025-11-25 11:19:24] 2025-11-25 10:19:24,840 [wrapper] apfmon messages muted
[2025-11-25 11:19:24] 2025-11-25 10:19:24,842 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:19:24] 2025-11-25 10:19:24,845 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:19:24]  *** Error codes and diagnostics ***
[2025-11-25 11:19:24]     "exeErrorCode": 65,
[2025-11-25 11:19:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:19:24]     "pilotErrorCode": 1305,
[2025-11-25 11:19:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 11:19:24]  *** Listing of results directory ***
[2025-11-25 11:19:24] total 403340
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      5112 Nov 24 11:31 queuedata.json
[2025-11-25 11:19:24] -rwx------ 1 boinc boinc     36292 Nov 24 11:33 runpilot2-wrapper.sh
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc       100 Nov 25 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:19:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 11:15 run_atlas
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc       105 Nov 25 11:15 job.xml
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc 408773880 Nov 25 11:15 EVNT.47483658._001306.pool.root.1
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc    611288 Nov 25 11:15 input.tar.gz
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:15 start_atlas.sh
[2025-11-25 11:19:24] drwxrwx--x 2 boinc boinc      4096 Nov 25 11:15 shared
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:15 boinc_setup_complete
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      6196 Nov 25 11:15 init_data.xml
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc         0 Nov 25 11:15 boinc_lockfile
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      2785 Nov 25 11:15 pandaJob.out
[2025-11-25 11:19:24] -rw------- 1 boinc boinc    991894 Nov 25 11:15 agis_schedconf.cvmfs.json
[2025-11-25 11:19:24] -rw------- 1 boinc boinc   1516240 Nov 25 11:15 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:19:24] drwx------ 7 boinc boinc      4096 Nov 25 11:15 pilot3
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc       522 Nov 25 11:16 boinc_task_state.xml
[2025-11-25 11:19:24] -rw------- 1 boinc boinc       982 Nov 25 11:16 memory_monitor_summary.json
[2025-11-25 11:19:24] -rw------- 1 boinc boinc     55817 Nov 25 11:16 log.47556149._002928.job.log.tgz.1
[2025-11-25 11:19:24] -rw------- 1 boinc boinc        95 Nov 25 11:18 pilot_heartbeat.json
[2025-11-25 11:19:24] -rw------- 1 boinc boinc      8387 Nov 25 11:18 heartbeat.json
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:19 boinc_mmap_file
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc        22 Nov 25 11:19 wrapper_checkpoint.txt
[2025-11-25 11:19:24] -rw------- 1 boinc boinc      4751 Nov 25 11:19 pilotlog.txt
[2025-11-25 11:19:24] -rw------- 1 boinc boinc     94854 Nov 25 11:19 log.47556149._002928.job.log.1
[2025-11-25 11:19:24] -rw------- 1 boinc boinc       186 Nov 25 11:19 output.list
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:19 runtime_log
[2025-11-25 11:19:24] -rw------- 1 boinc boinc    174080 Nov 25 11:19 result.tar.gz
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      8744 Nov 25 11:19 runtime_log.err
[2025-11-25 11:19:24] -rw------- 1 boinc boinc       648 Nov 25 11:19 GMcKDm83ih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmB1IKDmVekVdn.diag
[2025-11-25 11:19:24] -rw-r--r-- 1 boinc boinc      6028 Nov 25 11:19 stderr.txt
[2025-11-25 11:19:24] No HITS result produced
[2025-11-25 11:19:24]  *** Contents of shared directory: ***
[2025-11-25 11:19:24] total 399988
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc 408773880 Nov 25 11:15 ATLAS.root_0
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc    611288 Nov 25 11:15 input.tar.gz
[2025-11-25 11:19:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 11:15 start_atlas.sh
[2025-11-25 11:19:24] -rw------- 1 boinc boinc    174080 Nov 25 11:19 result.tar.gz
11:19:26 (97874): run_atlas exited; CPU time 31.012771
11:19:26 (97874): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN