Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:39 (4061406): wrapper (7.7.26015): starting
09:55:39 (4061406): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 09:55:39] Arguments: --nthreads 3
[2025-11-25 09:55:39] Threads: 3
[2025-11-25 09:55:39] Checking for CVMFS
[2025-11-25 09:55:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:55:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:55:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:55:40] 2.9.2.0 4019415 8 49504 153276 3 88 35135862 36864000 0 130560 0 125229 100.000 1 1 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 09:55:40] CVMFS is ok
[2025-11-25 09:55:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:55:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:55:40] Further information can be found at the LHC@home message board.
[2025-11-25 09:55:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:55:40] Checking for apptainer binary...
[2025-11-25 09:55:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:55:40] Running /usr/bin/apptainer --version
[2025-11-25 09:55:40] apptainer version 1.4.1-1.1
[2025-11-25 09:55:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:55:40] thA335
[2025-11-25 09:55:40] apptainer works
[2025-11-25 09:55:40] Set ATHENA_PROC_NUMBER=3
[2025-11-25 09:55:40] Set ATHENA_CORE_NUMBER=3
[2025-11-25 09:55:40] Starting ATLAS job with PandaID=6896243453
[2025-11-25 09:55:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:59:57]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:59:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:59:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:59:57] 
[2025-11-25 09:59:57] 2025-11-25 08:59:05,546 | INFO     | ***************************************
[2025-11-25 09:59:57] 2025-11-25 08:59:06,049 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | INFO     | sufficient remaining disk space (826900742144 B)
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | INFO     | update_server=False
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:59:57] 2025-11-25 08:59:06,064 | INFO     | aborting loop
[2025-11-25 09:59:57] 2025-11-25 08:59:06,094 | INFO     | all data control threads have been joined
[2025-11-25 09:59:57] 2025-11-25 08:59:06,377 | INFO     | all job control threads have been joined
[2025-11-25 09:59:57] 2025-11-25 08:59:07,070 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,071 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,100 | INFO     | [data] control thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:59:57] 2025-11-25 08:59:07,118 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,383 | INFO     | [job] control thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,403 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:07,509 | INFO     | all payload control threads have been joined
[2025-11-25 09:59:57] 2025-11-25 08:59:08,017 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,101 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,478 | INFO     | [job] validate thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,515 | INFO     | [payload] control thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,540 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,565 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:08,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:59:57] 2025-11-25 08:59:09,119 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:09,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:59:57] 2025-11-25 08:59:10,004 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:13,162 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:59:57] 2025-11-25 08:59:36,638 | INFO     | PID=4065139 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 09:59:57] 2025-11-25 08:59:36,638 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:59:57] 2025-11-25 08:59:36,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:59:57] 2025-11-25 08:59:36,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:59:57] 2025-11-25 08:59:51,766 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:59:57] 2025-11-25 08:59:52,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228426479424)>', '<ExcThread(monitor, started 140227620349696)>']
[2025-11-25 09:59:57] 2025-11-25 08:59:53,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:59:57] 2025-11-25 08:59:53,730 | INFO     | [monitor] control thread has ended
[2025-11-25 09:59:57] 2025-11-25 08:59:57,865 | INFO     | all workflow threads have been joined
[2025-11-25 09:59:57] 2025-11-25 08:59:57,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:59:57] 2025-11-25 08:59:57,866 | INFO     | traces error code: 0
[2025-11-25 09:59:57] 2025-11-25 08:59:57,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:59:57] 2025-11-25 08:59:57,911 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:59:57] 2025-11-25 08:59:57,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:59:57] 2025-11-25 08:59:57,917 [wrapper] pilotpid: 4065139
[2025-11-25 09:59:57] 2025-11-25 08:59:57,920 [wrapper] Pilot exit status: 0
[2025-11-25 09:59:57] 2025-11-25 08:59:57,927 [wrapper] pandaids: 6896243453
[2025-11-25 09:59:57] 2025-11-25 08:59:57,943 [wrapper] cleanup supervisor_pilot 4065145 4065140
[2025-11-25 09:59:57] 2025-11-25 08:59:57,946 [wrapper] Test setup, not cleaning
[2025-11-25 09:59:57] 2025-11-25 08:59:57,948 [wrapper] apfmon messages muted
[2025-11-25 09:59:57] 2025-11-25 08:59:57,951 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:59:57] 2025-11-25 08:59:57,953 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:59:57]  *** Error codes and diagnostics ***
[2025-11-25 09:59:57]     "exeErrorCode": 65,
[2025-11-25 09:59:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 09:59:57]     "pilotErrorCode": 1305,
[2025-11-25 09:59:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 09:59:57]  *** Listing of results directory ***
[2025-11-25 09:59:58] total 402984
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc    576529 Nov 24 22:08 pilot3.tar.gz
[2025-11-25 09:59:58] -rwx------ 1 boinc boinc     36292 Nov 24 22:51 runpilot2-wrapper.sh
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      5112 Nov 24 22:51 queuedata.json
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc       100 Nov 25 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:59:58] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 09:55 run_atlas
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc       105 Nov 25 09:55 job.xml
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc 408468477 Nov 25 09:55 EVNT.47483658._001422.pool.root.1
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc    590097 Nov 25 09:55 input.tar.gz
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc     15847 Nov 25 09:55 start_atlas.sh
[2025-11-25 09:59:58] drwxrwx--x 2 boinc boinc      4096 Nov 25 09:55 shared
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc         0 Nov 25 09:55 boinc_setup_complete
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      6196 Nov 25 09:55 init_data.xml
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc         0 Nov 25 09:55 boinc_lockfile
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      2786 Nov 25 09:55 pandaJob.out
[2025-11-25 09:59:58] -rw------- 1 boinc boinc    991858 Nov 25 09:55 agis_schedconf.cvmfs.json
[2025-11-25 09:59:58] -rw------- 1 boinc boinc   1516240 Nov 25 09:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:59:58] drwx------ 5 boinc boinc      4096 Nov 25 09:55 pilot3
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc       523 Nov 25 09:56 boinc_task_state.xml
[2025-11-25 09:59:58] -rw------- 1 boinc boinc       954 Nov 25 09:56 memory_monitor_summary.json
[2025-11-25 09:59:58] -rw------- 1 boinc boinc     55714 Nov 25 09:57 log.47556149._004089.job.log.tgz.1
[2025-11-25 09:59:58] -rw------- 1 boinc boinc        95 Nov 25 09:58 pilot_heartbeat.json
[2025-11-25 09:59:58] -rw------- 1 boinc boinc      8402 Nov 25 09:59 heartbeat.json
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      8192 Nov 25 09:59 boinc_mmap_file
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc        22 Nov 25 09:59 wrapper_checkpoint.txt
[2025-11-25 09:59:58] -rw------- 1 boinc boinc      4752 Nov 25 09:59 pilotlog.txt
[2025-11-25 09:59:58] -rw------- 1 boinc boinc     93267 Nov 25 09:59 log.47556149._004089.job.log.1
[2025-11-25 09:59:58] -rw------- 1 boinc boinc       186 Nov 25 09:59 output.list
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc       620 Nov 25 09:59 runtime_log
[2025-11-25 09:59:58] -rw------- 1 boinc boinc    163840 Nov 25 09:59 result.tar.gz
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      8744 Nov 25 09:59 runtime_log.err
[2025-11-25 09:59:58] -rw------- 1 boinc boinc       649 Nov 25 09:59 QMuLDmmdth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdwLKDm5QL4rm.diag
[2025-11-25 09:59:58] -rw-r--r-- 1 boinc boinc      8461 Nov 25 09:59 stderr.txt
[2025-11-25 09:59:58] No HITS result produced
[2025-11-25 09:59:58]  *** Contents of shared directory: ***
[2025-11-25 09:59:58] total 399656
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc 408468477 Nov 25 09:55 ATLAS.root_0
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc    590097 Nov 25 09:55 input.tar.gz
[2025-11-25 09:59:58] -rw-r--r-- 2 boinc boinc     15847 Nov 25 09:55 start_atlas.sh
[2025-11-25 09:59:58] -rw------- 1 boinc boinc    163840 Nov 25 09:59 result.tar.gz
09:59:59 (4061406): run_atlas exited; CPU time 31.713282
09:59:59 (4061406): called boinc_finish(0)

</stderr_txt>
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