Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:54 (323313): wrapper (7.7.26015): starting
21:52:54 (323313): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 21:52:54] Arguments: --nthreads 3
[2025-11-27 21:52:54] Threads: 3
[2025-11-27 21:52:54] Checking for CVMFS
[2025-11-27 21:52:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:52:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:52:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:52:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:52:54] 2.9.2.0 2771396 13044 100424 153384 0 81 19422553 36864000 0 130560 1 4825786 99.938 646858 838 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 21:52:54] CVMFS is ok
[2025-11-27 21:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 21:52:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 21:52:54] Further information can be found at the LHC@home message board.
[2025-11-27 21:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:52:54] Checking for apptainer binary...
[2025-11-27 21:52:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:52:54] Running /usr/bin/apptainer --version
[2025-11-27 21:52:54] apptainer version 1.4.1-1.1
[2025-11-27 21:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:52:54] atlasA217a
[2025-11-27 21:52:54] apptainer works
[2025-11-27 21:52:54] Set ATHENA_PROC_NUMBER=3
[2025-11-27 21:52:54] Set ATHENA_CORE_NUMBER=3
[2025-11-27 21:52:54] Starting ATLAS job with PandaID=6895559450
[2025-11-27 21:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:11:41]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:11:41] 2025-11-28 05:11:21,620 | INFO     | time since job start (29901s) is within the limit (172800.0s)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,435 | INFO     | monitor loop #2278: job 0:6895559450 is in state 'finished'
[2025-11-28 06:11:41] 2025-11-28 05:11:23,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 06:11:41] 2025-11-28 05:11:23,591 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3639.713416666667
[2025-11-28 06:11:41] 2025-11-28 05:11:23,592 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895559450/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,592 | INFO     | extracted standard info from prmon json
[2025-11-28 06:11:41] 2025-11-28 05:11:23,592 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 06:11:41] 2025-11-28 05:11:23,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 06:11:41] 2025-11-28 05:11:23,595 | INFO     | fitting pss+swap vs Time
[2025-11-28 06:11:41] 2025-11-28 05:11:23,595 | INFO     | sum of square deviations: 36480842142.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | sum of deviations: 243515138968.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | mean x: 1764291713.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | mean y: 2211447.6428571427
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | intersect: -11774702586.186605
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | chi2: 3.297347841064319
[2025-11-28 06:11:41] 2025-11-28 05:11:23,597 | INFO     | sum of square deviations: 35375435370.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,599 | INFO     | sum of deviations: 289806535104.9999
[2025-11-28 06:11:41] 2025-11-28 05:11:23,599 | INFO     | mean x: 1764291561.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,599 | INFO     | mean y: 2217800.0082474225
[2025-11-28 06:11:41] 2025-11-28 05:11:23,599 | INFO     | intersect: -14451405706.262724
[2025-11-28 06:11:41] 2025-11-28 05:11:23,600 | INFO     | chi2: 2.410769460874791
[2025-11-28 06:11:41] 2025-11-28 05:11:23,600 | INFO     | current chi2=2.410769460874791 (change=26.887620685579776 %)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,600 | INFO     | sum of square deviations: 34292587160.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | sum of deviations: 285070885779.49994
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | mean x: 1764291408.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | mean y: 2217133.064583333
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | intersect: -14664162870.509827
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | chi2: 2.4095167778641713
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | current chi2=2.4095167778641713 (change=0.05196195782922727 %)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | right removable region: 479
[2025-11-28 06:11:41] 2025-11-28 05:11:23,602 | INFO     | sum of square deviations: 35375435370.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,604 | INFO     | sum of deviations: 140757077757.9995
[2025-11-28 06:11:41] 2025-11-28 05:11:23,604 | INFO     | mean x: 1764291866.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,604 | INFO     | mean y: 2225603.2453608247
[2025-11-28 06:11:41] 2025-11-28 05:11:23,604 | INFO     | intersect: -7017802977.970884
[2025-11-28 06:11:41] 2025-11-28 05:11:23,605 | INFO     | chi2: 1.2147457245888373
[2025-11-28 06:11:41] 2025-11-28 05:11:23,605 | INFO     | current chi2=1.2147457245888373 (change=63.1599156916141 %)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,605 | INFO     | sum of square deviations: 34292587160.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | sum of deviations: 114354662813.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | mean x: 1764292018.5
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | mean y: 2229305.46875
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | intersect: -5881112710.658003
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | chi2: 0.9898533067214434
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | current chi2=0.9898533067214434 (change=18.513538538570668 %)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | left removable region: 20
[2025-11-28 06:11:41] 2025-11-28 05:11:23,607 | INFO     | sum of square deviations: 29985715710.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | sum of deviations: 139895566339.99997
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | mean x: 1764291988.0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | mean y: 2238009.4531590412
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | intersect: -8228902085.297791
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | chi2: 0.09159139997318064
[2025-11-28 06:11:41] 2025-11-28 05:11:23,609 | INFO     | current memory leak: 4.67 B/s (using 459 data points, chi2=0.09)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | could have reported an average CPU frequency of 3850 MHz (20 samples)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | ..............................
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . Timing measurements:
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . get job = 0 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . initial setup = 1 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . payload setup = 2 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . stage-in = 0 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . payload execution = 29877 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . stage-out = 1 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | . log creation = 0 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,610 | INFO     | ..............................
[2025-11-28 06:11:41] 2025-11-28 05:11:23,630 | INFO     | time since job start (29903s) is within the limit (172800.0s)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,639 | INFO     | 
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | job summary report
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | --------------------------------------------------
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | PanDA job id: 6895559450
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | task id: 47556149
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | errors: (none)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | pilot state: finished 
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | transexitcode: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | exeerrorcode: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | exeerrordiag: 
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | exitcode: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | exitmsg: OK
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | cpuconsumptiontime: 88312 s
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | nevents: 1000
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | neventsw: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | pid: 333480
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | pgrp: 333480
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | corecount: 3
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | event service: False
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | sizes: {0: 2284317, 3: 2284579, 11: 2284607, 29883: 2323907, 29885: 2332963, 29891: 2333153}
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | --------------------------------------------------
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | 
[2025-11-28 06:11:41] 2025-11-28 05:11:23,640 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | job 6895559450 has completed (purged errors)
[2025-11-28 06:11:41] 2025-11-28 05:11:23,653 | INFO     | overall cleanup function is called
[2025-11-28 06:11:41] 2025-11-28 05:11:24,661 | INFO     | --- collectZombieJob: --- 10, [333480]
[2025-11-28 06:11:41] 2025-11-28 05:11:24,661 | INFO     | zombie collector waiting for pid 333480
[2025-11-28 06:11:41] 2025-11-28 05:11:24,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:11:41] 2025-11-28 05:11:24,662 | INFO     | collected zombie processes
[2025-11-28 06:11:41] 2025-11-28 05:11:24,662 | INFO     | will attempt to kill all subprocesses of pid=333480
[2025-11-28 06:11:41] 2025-11-28 05:11:24,704 | INFO     | process IDs to be killed: [333480] (in reverse order)
[2025-11-28 06:11:41] 2025-11-28 05:11:24,728 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:11:41] 2025-11-28 05:11:24,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:11:41] 2025-11-28 05:11:24,729 | INFO     | did not find any defunct processes belonging to 333480
[2025-11-28 06:11:41] 2025-11-28 05:11:24,730 | INFO     | did not find any defunct processes belonging to 333480
[2025-11-28 06:11:41] 2025-11-28 05:11:24,730 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:11:41] 2025-11-28 05:11:24,730 | INFO     | ready for new job
[2025-11-28 06:11:41] 2025-11-28 05:11:24,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | ***************************************
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | ***************************************
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | 
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | architecture information:
[2025-11-28 06:11:41] 2025-11-28 05:11:24,732 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:11:41] 2025-11-28 05:11:24,741 | INFO     | cat /etc/os-release:
[2025-11-28 06:11:41] NAME="CentOS Linux"
[2025-11-28 06:11:41] VERSION="7 (Core)"
[2025-11-28 06:11:41] ID="centos"
[2025-11-28 06:11:41] ID_LIKE="rhel fedora"
[2025-11-28 06:11:41] VERSION_ID="7"
[2025-11-28 06:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:11:41] ANSI_COLOR="0;31"
[2025-11-28 06:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:11:41] HOME_URL="https://www.centos.org/"
[2025-11-28 06:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:11:41] 
[2025-11-28 06:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:11:41] 
[2025-11-28 06:11:41] 2025-11-28 05:11:24,741 | INFO     | ***************************************
[2025-11-28 06:11:41] 2025-11-28 05:11:25,244 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 06:11:41] 2025-11-28 05:11:25,258 | INFO     | sufficient remaining disk space (337917247488 B)
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | INFO     | update_server=False
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | INFO     | aborting loop
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:11:41] 2025-11-28 05:11:25,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:11:41] 2025-11-28 05:11:25,484 | INFO     | all payload control threads have been joined
[2025-11-28 06:11:41] 2025-11-28 05:11:25,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:11:41] 2025-11-28 05:11:25,658 | INFO     | all job control threads have been joined
[2025-11-28 06:11:41] 2025-11-28 05:11:25,959 | INFO     | all data control threads have been joined
[2025-11-28 06:11:41] 2025-11-28 05:11:26,263 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,265 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,265 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,305 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,434 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,490 | INFO     | [payload] control thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,664 | INFO     | [job] control thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,729 | INFO     | [job] validate thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,743 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:26,964 | INFO     | [data] control thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:27,066 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:27,067 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:27,180 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:27,608 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:27,668 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:28,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:11:41] 2025-11-28 05:11:32,140 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:11:41] 2025-11-28 05:11:34,974 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:11:41] 2025-11-28 05:11:36,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341660702528)>', '<ExcThread(monitor, started 140341302765312)>']
[2025-11-28 06:11:41] 2025-11-28 05:11:37,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:11:41] 2025-11-28 05:11:37,319 | INFO     | [monitor] control thread has ended
[2025-11-28 06:11:41] 2025-11-28 05:11:41,376 | INFO     | all workflow threads have been joined
[2025-11-28 06:11:41] 2025-11-28 05:11:41,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:11:41] 2025-11-28 05:11:41,377 | INFO     | traces error code: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:41,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:11:41] 2025-11-28 05:11:41,426 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:11:41] 2025-11-28 05:11:41,429 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:11:41] 2025-11-28 05:11:41,431 [wrapper] pilotpid: 327037
[2025-11-28 06:11:41] 2025-11-28 05:11:41,434 [wrapper] Pilot exit status: 0
[2025-11-28 06:11:41] 2025-11-28 05:11:41,441 [wrapper] pandaids: 6895559450
[2025-11-28 06:11:41] 2025-11-28 05:11:41,456 [wrapper] cleanup supervisor_pilot  389116 327038
[2025-11-28 06:11:41] 2025-11-28 05:11:41,458 [wrapper] Test setup, not cleaning
[2025-11-28 06:11:41] 2025-11-28 05:11:41,461 [wrapper] apfmon messages muted
[2025-11-28 06:11:41] 2025-11-28 05:11:41,463 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:11:41] 2025-11-28 05:11:41,466 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:11:41]  *** Error codes and diagnostics ***
[2025-11-28 06:11:41]     "exeErrorCode": 0,
[2025-11-28 06:11:41]     "exeErrorDiag": "",
[2025-11-28 06:11:41]     "pilotErrorCode": 0,
[2025-11-28 06:11:41]     "pilotErrorDiag": "",
[2025-11-28 06:11:41]  *** Listing of results directory ***
[2025-11-28 06:11:41] total 1315084
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc    576529 Nov 24 11:13 pilot3.tar.gz
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc      5112 Nov 24 11:31 queuedata.json
[2025-11-28 06:11:41] -rwx------ 1 boinc boinc     36292 Nov 24 11:31 runpilot2-wrapper.sh
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc       100 Nov 27 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:11:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 21:52 run_atlas
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc       105 Nov 27 21:52 job.xml
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc 410001939 Nov 27 21:52 EVNT.47483658._001307.pool.root.1
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc    590109 Nov 27 21:52 input.tar.gz
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 21:52 start_atlas.sh
[2025-11-28 06:11:41] drwxrwx--x 2 boinc boinc      4096 Nov 27 21:52 shared
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc         0 Nov 27 21:52 boinc_setup_complete
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc      6445 Nov 27 21:52 init_data.xml
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc         0 Nov 27 21:52 boinc_lockfile
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc      2785 Nov 27 21:52 pandaJob.out
[2025-11-28 06:11:41] -rw------- 1 boinc boinc    991500 Nov 27 21:52 agis_schedconf.cvmfs.json
[2025-11-28 06:11:41] drwx------ 5 boinc boinc      4096 Nov 27 21:53 pilot3
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc       531 Nov 28 06:07 boinc_task_state.xml
[2025-11-28 06:11:41] -rw------- 1 boinc boinc        95 Nov 28 06:10 pilot_heartbeat.json
[2025-11-28 06:11:41] -rw------- 1 boinc boinc 921960636 Nov 28 06:10 HITS.47556149._002937.pool.root.1
[2025-11-28 06:11:41] -rw------- 1 boinc boinc      1041 Nov 28 06:11 memory_monitor_summary.json
[2025-11-28 06:11:41] -rw------- 1 boinc boinc   1516240 Nov 28 06:11 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:11:41] -rw------- 1 boinc boinc   1177979 Nov 28 06:11 log.47556149._002937.job.log.tgz.1
[2025-11-28 06:11:41] -rw------- 1 boinc boinc      8575 Nov 28 06:11 heartbeat.json
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc      8192 Nov 28 06:11 boinc_mmap_file
[2025-11-28 06:11:41] -rw------- 1 boinc boinc      4556 Nov 28 06:11 pilotlog.txt
[2025-11-28 06:11:41] -rw------- 1 boinc boinc   4203089 Nov 28 06:11 log.47556149._002937.job.log.1
[2025-11-28 06:11:41] -rw------- 1 boinc boinc       353 Nov 28 06:11 output.list
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc       620 Nov 28 06:11 runtime_log
[2025-11-28 06:11:41] -rw------- 1 boinc boinc   5396480 Nov 28 06:11 result.tar.gz
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc      8918 Nov 28 06:11 runtime_log.err
[2025-11-28 06:11:41] -rw------- 1 boinc boinc       669 Nov 28 06:11 eogNDm81ih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm10IKDmDTRlDm.diag
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc        28 Nov 28 06:11 wrapper_checkpoint.txt
[2025-11-28 06:11:41] -rw-r--r-- 1 boinc boinc     21159 Nov 28 06:11 stderr.txt
[2025-11-28 06:11:41] HITS file was successfully produced:
[2025-11-28 06:11:41] -rw------- 1 boinc boinc 921960636 Nov 28 06:10 shared/HITS.pool.root.1
[2025-11-28 06:11:41]  *** Contents of shared directory: ***
[2025-11-28 06:11:41] total 1306628
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc 410001939 Nov 27 21:52 ATLAS.root_0
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc    590109 Nov 27 21:52 input.tar.gz
[2025-11-28 06:11:41] -rw-r--r-- 2 boinc boinc     15847 Nov 27 21:52 start_atlas.sh
[2025-11-28 06:11:41] -rw------- 1 boinc boinc 921960636 Nov 28 06:10 HITS.pool.root.1
[2025-11-28 06:11:41] -rw------- 1 boinc boinc   5396480 Nov 28 06:11 result.tar.gz
06:11:43 (323313): run_atlas exited; CPU time 88320.748445
06:11:43 (323313): called boinc_finish(0)

</stderr_txt>
]]>

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