Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:54:42 (2369821): wrapper (7.7.26015): starting
00:54:42 (2369821): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:54:43] Arguments: --nthreads 8
[2025-11-25 00:54:43] Threads: 8
[2025-11-25 00:54:43] Checking for CVMFS
[2025-11-25 00:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:54:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:54:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:54:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:54:44] 2.11.3.0 476926 26733 199556 153276 0 187 42626541 45568001 14031 130560 0 178345794 99.793 116728771 20357 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-25 00:54:44] CVMFS is ok
[2025-11-25 00:54:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:54:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:54:44] Further information can be found at the LHC@home message board.
[2025-11-25 00:54:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:54:44] Checking for apptainer binary...
[2025-11-25 00:54:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:54:44] Running /usr/bin/apptainer --version
[2025-11-25 00:54:44] apptainer version 1.4.1-1.el9
[2025-11-25 00:54:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:54:44] wns0002.triumf.lcg
[2025-11-25 00:54:44] apptainer works
[2025-11-25 00:54:44] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:54:44] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:54:44] Starting ATLAS job with PandaID=6896243362
[2025-11-25 00:54:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:00:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:00:23] 2025-11-25 08:59:51,561 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . Timing measurements:
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . get job = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . initial setup = 4 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload setup = 13 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-in = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload execution = 122 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-out = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . log creation = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896243362/pilotlog.txt
[2025-11-25 01:00:23] 2025-11-25 08:59:51,597 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 01:00:23] - Log from pilotlog.txt -
[2025-11-25 01:00:23] 2025-11-25 08:59:51,559 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896243362/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | INFO     | extracted standard info from prmon json
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 01:00:23] 2025-11-25 08:59:51,561 | WARNING  | wrong length of table data, x=[1764060954.0, 1764061015.0], y=[1772.0, 877594.0] (must be same and length>=4)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,561 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . Timing measurements:
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . get job = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . initial setup = 4 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload setup = 13 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-in = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload execution = 122 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-out = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . log creation = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896243362/pilotlog.txt
[2025-11-25 01:00:23] 2025-11-25 08:59:51,598 | WARNING  | 
[2025-11-25 01:00:23] [begin log extracts]
[2025-11-25 01:00:23] - Log from pilotlog.txt -
[2025-11-25 01:00:23] 2025-11-25 08:59:51,559 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896243362/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | INFO     | extracted standard info from prmon json
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 01:00:23] 2025-11-25 08:59:51,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 01:00:23] 2025-11-25 08:59:51,561 | WARNING  | wrong length of table data, x=[1764060954.0, 1764061015.0], y=[1772.0, 877594.0] (must be same and length>=4)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,561 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . Timing measurements:
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . get job = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . initial setup = 4 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload setup = 13 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-in = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . payload execution = 122 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . stage-out = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | . log creation = 0 s
[2025-11-25 01:00:23] 2025-11-25 08:59:51,562 | INFO     | ..............................
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 01:00:23] 2025-11-25 08:59:51,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896243362/pilotlog.txt
[2025-11-25 01:00:23] [end log extracts]
[2025-11-25 01:00:23] 2025-11-25 08:59:51,598 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 01:00:23] 2025-11-25 08:59:51,599 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 01:00:23] 2025-11-25 08:59:52,005 | INFO     | 
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | job summary report
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | --------------------------------------------------
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | PanDA job id: 6896243362
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | task id: 47556149
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 00:57:38,757 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 01:00:23] 2025-11-25 08:59:52,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | pilot state: failed 
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | transexitcode: 65
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | exeerrorcode: 65
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | exitcode: 65
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | cpuconsumptiontime: 53 s
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | nevents: 0
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | neventsw: 0
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | pid: 2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | pgrp: 2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | corecount: 8
[2025-11-25 01:00:23] 2025-11-25 08:59:52,007 | INFO     | event service: False
[2025-11-25 01:00:23] 2025-11-25 08:59:52,008 | INFO     | sizes: {0: 2284134, 1: 2284333, 8: 2284595, 11: 2284623, 139: 2310244, 140: 2310220, 142: 2314694, 264: 2314832}
[2025-11-25 01:00:23] 2025-11-25 08:59:52,008 | INFO     | --------------------------------------------------
[2025-11-25 01:00:23] 2025-11-25 08:59:52,008 | INFO     | 
[2025-11-25 01:00:23] 2025-11-25 08:59:52,008 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:00:23] 2025-11-25 08:59:52,030 | INFO     | job 6896243362 has completed (purged errors)
[2025-11-25 01:00:23] 2025-11-25 08:59:52,030 | INFO     | overall cleanup function is called
[2025-11-25 01:00:23] 2025-11-25 08:59:53,038 | INFO     | --- collectZombieJob: --- 10, [2381148]
[2025-11-25 01:00:23] 2025-11-25 08:59:53,038 | INFO     | zombie collector waiting for pid 2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:53,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:00:23] 2025-11-25 08:59:53,038 | INFO     | collected zombie processes
[2025-11-25 01:00:23] 2025-11-25 08:59:53,038 | INFO     | will attempt to kill all subprocesses of pid=2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:53,379 | INFO     | process IDs to be killed: [2381148] (in reverse order)
[2025-11-25 01:00:23] 2025-11-25 08:59:53,435 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:00:23] 2025-11-25 08:59:53,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:00:23] 2025-11-25 08:59:53,441 | INFO     | did not find any defunct processes belonging to 2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:53,448 | INFO     | did not find any defunct processes belonging to 2381148
[2025-11-25 01:00:23] 2025-11-25 08:59:53,449 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:00:23] 2025-11-25 08:59:53,449 | INFO     | ready for new job
[2025-11-25 01:00:23] 2025-11-25 08:59:53,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:00:23] 2025-11-25 08:59:53,451 | INFO     | ***************************************
[2025-11-25 01:00:23] 2025-11-25 08:59:53,451 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:00:23] 2025-11-25 08:59:53,451 | INFO     | ***************************************
[2025-11-25 01:00:23] 2025-11-25 08:59:53,451 | INFO     | 
[2025-11-25 01:00:23] 2025-11-25 08:59:53,452 | INFO     | architecture information:
[2025-11-25 01:00:23] 2025-11-25 08:59:53,453 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:00:23] 2025-11-25 08:59:53,480 | INFO     | cat /etc/os-release:
[2025-11-25 01:00:23] NAME="CentOS Linux"
[2025-11-25 01:00:23] VERSION="7 (Core)"
[2025-11-25 01:00:23] ID="centos"
[2025-11-25 01:00:23] ID_LIKE="rhel fedora"
[2025-11-25 01:00:23] VERSION_ID="7"
[2025-11-25 01:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:00:23] ANSI_COLOR="0;31"
[2025-11-25 01:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:00:23] HOME_URL="https://www.centos.org/"
[2025-11-25 01:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:00:23] 
[2025-11-25 01:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:00:23] 
[2025-11-25 01:00:23] 2025-11-25 08:59:53,481 | INFO     | ***************************************
[2025-11-25 01:00:23] 2025-11-25 08:59:53,984 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 01:00:23] 2025-11-25 08:59:54,000 | INFO     | sufficient remaining disk space (1052731506688 B)
[2025-11-25 01:00:23] 2025-11-25 08:59:54,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:00:23] 2025-11-25 08:59:54,000 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:00:23] 2025-11-25 08:59:54,000 | INFO     | update_server=False
[2025-11-25 01:00:23] 2025-11-25 08:59:54,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:00:23] 2025-11-25 08:59:54,154 | INFO     | all data control threads have been joined
[2025-11-25 01:00:23] 2025-11-25 08:59:54,483 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 01:00:23] 2025-11-25 08:59:54,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 01:00:23] 2025-11-25 08:59:54,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:00:23] 2025-11-25 08:59:54,483 | INFO     | will abort loop
[2025-11-25 01:00:23] 2025-11-25 08:59:54,603 | INFO     | all payload control threads have been joined
[2025-11-25 01:00:23] 2025-11-25 08:59:54,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:00:23] 2025-11-25 08:59:55,005 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,026 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,160 | INFO     | [data] control thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,366 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,489 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,526 | INFO     | all job control threads have been joined
[2025-11-25 01:00:23] 2025-11-25 08:59:55,609 | INFO     | [payload] control thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:55,686 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,007 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,122 | INFO     | [job] validate thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,218 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,531 | INFO     | [job] control thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:56,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:00:23] 2025-11-25 08:59:56,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:00:23] 2025-11-25 08:59:56,877 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:00:23] 2025-11-25 08:59:57,693 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:00:23] 2025-11-25 09:00:00,792 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:00:23] 2025-11-25 09:00:04,212 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:00:23] 2025-11-25 09:00:04,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036677736256)>', '<ExcThread(monitor, started 140035814823680)>']
[2025-11-25 01:00:23] 2025-11-25 09:00:09,414 | INFO     | all workflow threads have been joined
[2025-11-25 01:00:23] 2025-11-25 09:00:09,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:00:23] 2025-11-25 09:00:09,415 | INFO     | traces error code: 0
[2025-11-25 01:00:23] 2025-11-25 09:00:09,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:00:23] 2025-11-25 09:00:23,480 | INFO     | PID=2373488 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 01:00:23] 2025-11-25 09:00:23,480 | INFO     | .. there are 19 such processes running
[2025-11-25 01:00:23] 2025-11-25 09:00:23,481 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:00:23] 2025-11-25 09:00:23,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:00:23] 2025-11-25 09:00:23,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:00:23] 2025-11-25 09:00:23,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:00:23] 2025-11-25 09:00:23,481 | INFO     | [monitor] control thread has ended
[2025-11-25 01:00:23] 2025-11-25 09:00:23,666 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:00:23] 2025-11-25 09:00:23,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:00:23] 2025-11-25 09:00:23,671 [wrapper] pilotpid: 2373488
[2025-11-25 01:00:23] 2025-11-25 09:00:23,673 [wrapper] Pilot exit status: 0
[2025-11-25 01:00:23] 2025-11-25 09:00:23,684 [wrapper] pandaids: 6896243362
[2025-11-25 01:00:23] 2025-11-25 09:00:23,719 [wrapper] cleanup supervisor_pilot 2373494 2373489
[2025-11-25 01:00:23] 2025-11-25 09:00:23,721 [wrapper] Test setup, not cleaning
[2025-11-25 01:00:23] 2025-11-25 09:00:23,724 [wrapper] apfmon messages muted
[2025-11-25 01:00:23] 2025-11-25 09:00:23,727 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:00:23] 2025-11-25 09:00:23,729 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:00:23]  *** Error codes and diagnostics ***
[2025-11-25 01:00:23]     "exeErrorCode": 65,
[2025-11-25 01:00:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 01:00:23]     "pilotErrorCode": 1305,
[2025-11-25 01:00:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 01:00:23]  *** Listing of results directory ***
[2025-11-25 01:00:23] total 403464
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc    576529 Nov 24 13:08 pilot3.tar.gz
[2025-11-25 01:00:23] -rwx------. 1 boinc boinc     36292 Nov 24 13:46 runpilot2-wrapper.sh
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc      5112 Nov 24 13:46 queuedata.json
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:00:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:54 run_atlas
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:54 job.xml
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc      6444 Nov 25 00:54 init_data.xml
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc 408924840 Nov 25 00:54 EVNT.47483658._001419.pool.root.1
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:54 start_atlas.sh
[2025-11-25 01:00:23] drwxrwx--x. 2 boinc boinc      4096 Nov 25 00:54 shared
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:54 input.tar.gz
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:54 boinc_lockfile
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc      2782 Nov 25 00:54 pandaJob.out
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc    991858 Nov 25 00:55 agis_schedconf.cvmfs.json
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc   1516240 Nov 25 00:55 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:00:23] drwx------. 5 boinc boinc      4096 Nov 25 00:55 pilot3
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc       524 Nov 25 00:57 boinc_task_state.xml
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc       984 Nov 25 00:57 memory_monitor_summary.json
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc     49678 Nov 25 00:57 log.47556149._004051.job.log.tgz.1
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc     10328 Nov 25 00:59 heartbeat.json
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc      8192 Nov 25 01:00 boinc_mmap_file
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc        23 Nov 25 01:00 wrapper_checkpoint.txt
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc       823 Nov 25 01:00 pilotlog.txt
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc        95 Nov 25 01:00 pilot_heartbeat.json
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc    104373 Nov 25 01:00 log.47556149._004051.job.log.1
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc       186 Nov 25 01:00 output.list
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc       620 Nov 25 01:00 runtime_log
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc    174080 Nov 25 01:00 result.tar.gz
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc      8634 Nov 25 01:00 runtime_log.err
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc       644 Nov 25 01:00 qEkKDm3Yth8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBwLKDmcfCeMm.diag
[2025-11-25 01:00:23] -rw-r--r--. 1 boinc boinc     22440 Nov 25 01:00 stderr.txt
[2025-11-25 01:00:23] No HITS result produced
[2025-11-25 01:00:23]  *** Contents of shared directory: ***
[2025-11-25 01:00:23] total 400116
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc 408924840 Nov 25 00:54 ATLAS.root_0
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:54 start_atlas.sh
[2025-11-25 01:00:23] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:54 input.tar.gz
[2025-11-25 01:00:23] -rw-------. 1 boinc boinc    174080 Nov 25 01:00 result.tar.gz
01:00:25 (2369821): run_atlas exited; CPU time 55.554252
01:00:25 (2369821): called boinc_finish(0)

</stderr_txt>
]]>

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