Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:05:06 (30378): wrapper (7.7.26015): starting
04:05:06 (30378): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:05:06] Arguments: --nthreads 8
[2025-11-25 04:05:06] Threads: 8
[2025-11-25 04:05:06] Checking for CVMFS
[2025-11-25 04:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:05:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:05:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:05:06] 2.11.2.0 2466 116026 134040 153276 3 81 11465276 18432000 1885 130560 0 82050086 99.973 5012268 28213 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 04:05:06] CVMFS is ok
[2025-11-25 04:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:05:06] Further information can be found at the LHC@home message board.
[2025-11-25 04:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:05:06] Checking for apptainer binary...
[2025-11-25 04:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:05:06] Running /usr/bin/apptainer --version
[2025-11-25 04:05:06] apptainer version 1.3.2-1.el7
[2025-11-25 04:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:05:07] c-206-20.aglt2.org
[2025-11-25 04:05:07] apptainer works
[2025-11-25 04:05:07] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:05:07] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:05:07] Starting ATLAS job with PandaID=6894238196
[2025-11-25 04:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:33:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:33:20] 2025-11-26 04:32:55,643 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 23:33:20] 2025-11-26 04:32:55,647 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.5
[2025-11-25 23:33:20] 2025-11-26 04:32:55,650 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894238196/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,650 | INFO     | extracted standard info from prmon json
[2025-11-25 23:33:20] 2025-11-26 04:32:55,651 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:33:20] 2025-11-26 04:32:55,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:33:20] 2025-11-26 04:32:55,666 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:33:20] 2025-11-26 04:32:55,667 | INFO     | sum of square deviations: 469142364139.82196
[2025-11-25 23:33:20] 2025-11-26 04:32:55,706 | INFO     | sum of deviations: 2265175279575.1406
[2025-11-25 23:33:20] 2025-11-26 04:32:55,706 | INFO     | mean x: 1764096529.107143
[2025-11-25 23:33:20] 2025-11-26 04:32:55,707 | INFO     | mean y: 2863980.299651568
[2025-11-25 23:33:20] 2025-11-26 04:32:55,707 | INFO     | intersect: -8514780457.6408415
[2025-11-25 23:33:20] 2025-11-26 04:32:55,708 | INFO     | chi2: 5.466189939370758
[2025-11-25 23:33:20] 2025-11-26 04:32:55,710 | INFO     | sum of square deviations: 463039336707.9701
[2025-11-25 23:33:20] 2025-11-26 04:32:55,754 | INFO     | sum of deviations: 2581204808224.2544
[2025-11-25 23:33:20] 2025-11-26 04:32:55,754 | INFO     | mean x: 1764096376.6097987
[2025-11-25 23:33:20] 2025-11-26 04:32:55,754 | INFO     | mean y: 2871873.7987751532
[2025-11-25 23:33:20] 2025-11-26 04:32:55,754 | INFO     | intersect: -9831052997.141504
[2025-11-25 23:33:20] 2025-11-26 04:32:55,756 | INFO     | chi2: 3.2156470286350762
[2025-11-25 23:33:20] 2025-11-26 04:32:55,756 | INFO     | current chi2=3.2156470286350762 (change=41.17205833858663 %)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,758 | INFO     | sum of square deviations: 456989473063.60284
[2025-11-25 23:33:20] 2025-11-26 04:32:55,803 | INFO     | sum of deviations: 2753335153647.477
[2025-11-25 23:33:20] 2025-11-26 04:32:55,804 | INFO     | mean x: 1764096224.112478
[2025-11-25 23:33:20] 2025-11-26 04:32:55,804 | INFO     | mean y: 2876210.9806678384
[2025-11-25 23:33:20] 2025-11-26 04:32:55,804 | INFO     | intersect: -10625701545.316263
[2025-11-25 23:33:20] 2025-11-26 04:32:55,806 | INFO     | chi2: 2.4462902397864412
[2025-11-25 23:33:20] 2025-11-26 04:32:55,806 | INFO     | current chi2=2.4462902397864412 (change=23.925411651141285 %)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,806 | INFO     | right removable region: 1137
[2025-11-25 23:33:20] 2025-11-26 04:32:55,808 | INFO     | sum of square deviations: 463038911537.97034
[2025-11-25 23:33:20] 2025-11-26 04:32:55,839 | INFO     | time since job start (70056s) is within the limit (172800.0s)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,853 | INFO     | sum of deviations: 1973347419271.6824
[2025-11-25 23:33:20] 2025-11-26 04:32:55,854 | INFO     | mean x: 1764096681.6097987
[2025-11-25 23:33:20] 2025-11-26 04:32:55,854 | INFO     | mean y: 2871263.600174978
[2025-11-25 23:33:20] 2025-11-26 04:32:55,854 | INFO     | intersect: -7515234768.650573
[2025-11-25 23:33:20] 2025-11-26 04:32:55,856 | INFO     | chi2: 3.4993829018110154
[2025-11-25 23:33:20] 2025-11-26 04:32:55,856 | INFO     | current chi2=3.4993829018110154 (change=35.98131531057174 %)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,857 | INFO     | sum of square deviations: 456988971339.705
[2025-11-25 23:33:20] 2025-11-26 04:32:55,902 | INFO     | sum of deviations: 1898665650873.8079
[2025-11-25 23:33:20] 2025-11-26 04:32:55,902 | INFO     | mean x: 1764096834.1080844
[2025-11-25 23:33:20] 2025-11-26 04:32:55,903 | INFO     | mean y: 2873145.7495606327
[2025-11-25 23:33:20] 2025-11-26 04:32:55,903 | INFO     | intersect: -7326472361.029496
[2025-11-25 23:33:20] 2025-11-26 04:32:55,904 | INFO     | chi2: 3.4509947941632206
[2025-11-25 23:33:20] 2025-11-26 04:32:55,905 | INFO     | current chi2=3.4509947941632206 (change=1.3827611611965285 %)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,905 | INFO     | left removable region: 20
[2025-11-25 23:33:20] 2025-11-26 04:32:55,906 | INFO     | sum of square deviations: 432154542967.1497
[2025-11-25 23:33:20] 2025-11-26 04:32:55,949 | INFO     | sum of deviations: 2264289877567.0225
[2025-11-25 23:33:20] 2025-11-26 04:32:55,950 | INFO     | mean x: 1764096803.6123545
[2025-11-25 23:33:20] 2025-11-26 04:32:55,950 | INFO     | mean y: 2889808.824529991
[2025-11-25 23:33:20] 2025-11-26 04:32:55,950 | INFO     | intersect: -9240161318.307623
[2025-11-25 23:33:20] 2025-11-26 04:32:55,952 | INFO     | chi2: 0.2842540203076575
[2025-11-25 23:33:20] 2025-11-26 04:32:55,952 | INFO     | current memory leak: 5.24 B/s (using 1117 data points, chi2=0.28)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,953 | INFO     | could have reported an average CPU frequency of 2630 MHz (42 samples)
[2025-11-25 23:33:20] 2025-11-26 04:32:55,953 | INFO     | ..............................
[2025-11-25 23:33:20] 2025-11-26 04:32:55,953 | INFO     | . Timing measurements:
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . get job = 0 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . initial setup = 2 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . payload setup = 5 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . stage-in = 0 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . payload execution = 70021 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,954 | INFO     | . stage-out = 4 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,955 | INFO     | . log creation = 0 s
[2025-11-25 23:33:20] 2025-11-26 04:32:55,955 | INFO     | ..............................
[2025-11-25 23:33:20] 2025-11-26 04:32:56,081 | INFO     | 
[2025-11-25 23:33:20] 2025-11-26 04:32:56,081 | INFO     | job summary report
[2025-11-25 23:33:20] 2025-11-26 04:32:56,081 | INFO     | --------------------------------------------------
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | PanDA job id: 6894238196
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | task id: 47533962
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | errors: (none)
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | pilot state: finished 
[2025-11-25 23:33:20] 2025-11-26 04:32:56,082 | INFO     | transexitcode: 0
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | exeerrorcode: 0
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | exeerrordiag: 
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | exitcode: 0
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | exitmsg: OK
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | cpuconsumptiontime: 542007 s
[2025-11-25 23:33:20] 2025-11-26 04:32:56,083 | INFO     | nevents: 1000
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | neventsw: 0
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | pid: 10554
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | pgrp: 10554
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | corecount: 8
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | event service: False
[2025-11-25 23:33:20] 2025-11-26 04:32:56,084 | INFO     | sizes: {0: 2284139, 1: 2284338, 2: 2284338, 5: 2284628, 12: 2284684, 70030: 2341412, 70034: 2350406, 70037: 2350462, 70041: 2350708}
[2025-11-25 23:33:20] 2025-11-26 04:32:56,085 | INFO     | --------------------------------------------------
[2025-11-25 23:33:20] 2025-11-26 04:32:56,085 | INFO     | 
[2025-11-25 23:33:20] 2025-11-26 04:32:56,085 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 23:33:20] 2025-11-26 04:32:56,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:33:20] 2025-11-26 04:32:56,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:33:20] 2025-11-26 04:32:56,109 | INFO     | job 6894238196 has completed (purged errors)
[2025-11-25 23:33:20] 2025-11-26 04:32:56,110 | INFO     | overall cleanup function is called
[2025-11-25 23:33:20] 2025-11-26 04:32:57,052 | INFO     | PID=2443 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:33:20] 2025-11-26 04:32:57,053 | INFO     | .. there are 3 such processes running
[2025-11-25 23:33:20] 2025-11-26 04:32:57,126 | INFO     | --- collectZombieJob: --- 10, [10554]
[2025-11-25 23:33:20] 2025-11-26 04:32:57,127 | INFO     | zombie collector waiting for pid 10554
[2025-11-25 23:33:20] 2025-11-26 04:32:57,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:33:20] 2025-11-26 04:32:57,127 | INFO     | collected zombie processes
[2025-11-25 23:33:20] 2025-11-26 04:32:57,127 | INFO     | will attempt to kill all subprocesses of pid=10554
[2025-11-25 23:33:20] 2025-11-26 04:32:57,299 | INFO     | process IDs to be killed: [10554] (in reverse order)
[2025-11-25 23:33:20] 2025-11-26 04:32:57,361 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:33:20] 2025-11-26 04:32:57,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:33:20] 2025-11-26 04:32:57,367 | INFO     | did not find any defunct processes belonging to 10554
[2025-11-25 23:33:20] 2025-11-26 04:32:57,372 | INFO     | did not find any defunct processes belonging to 10554
[2025-11-25 23:33:20] 2025-11-26 04:32:57,373 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:33:20] 2025-11-26 04:32:57,374 | INFO     | ready for new job
[2025-11-25 23:33:20] 2025-11-26 04:32:57,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:33:20] 2025-11-26 04:32:57,379 | INFO     | ***************************************
[2025-11-25 23:33:20] 2025-11-26 04:32:57,379 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:33:20] 2025-11-26 04:32:57,379 | INFO     | ***************************************
[2025-11-25 23:33:20] 2025-11-26 04:32:57,379 | INFO     | 
[2025-11-25 23:33:20] 2025-11-26 04:32:57,381 | INFO     | architecture information:
[2025-11-25 23:33:20] 2025-11-26 04:32:57,381 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:33:20] 2025-11-26 04:32:57,395 | INFO     | cat /etc/os-release:
[2025-11-25 23:33:20] NAME="CentOS Linux"
[2025-11-25 23:33:20] VERSION="7 (Core)"
[2025-11-25 23:33:20] ID="centos"
[2025-11-25 23:33:20] ID_LIKE="rhel fedora"
[2025-11-25 23:33:20] VERSION_ID="7"
[2025-11-25 23:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:33:20] ANSI_COLOR="0;31"
[2025-11-25 23:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:33:20] HOME_URL="https://www.centos.org/"
[2025-11-25 23:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:33:20] 
[2025-11-25 23:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:33:20] 
[2025-11-25 23:33:20] 2025-11-26 04:32:57,396 | INFO     | ***************************************
[2025-11-25 23:33:20] 2025-11-26 04:32:57,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 23:33:20] 2025-11-26 04:32:57,913 | INFO     | sufficient remaining disk space (24772608000 B)
[2025-11-25 23:33:20] 2025-11-26 04:32:57,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:33:20] 2025-11-26 04:32:57,914 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:33:20] 2025-11-26 04:32:57,914 | INFO     | update_server=False
[2025-11-25 23:33:20] 2025-11-26 04:32:57,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:33:20] 2025-11-26 04:32:57,914 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 23:33:20] 2025-11-26 04:32:57,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:33:20] 2025-11-26 04:32:57,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:33:20] 2025-11-26 04:32:57,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:33:20] 2025-11-26 04:32:57,915 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:33:20] 2025-11-26 04:32:57,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:33:20] 2025-11-26 04:32:57,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:33:20] 2025-11-26 04:32:57,916 | INFO     | aborting loop
[2025-11-25 23:33:20] 2025-11-26 04:32:58,054 | INFO     | all data control threads have been joined
[2025-11-25 23:33:20] 2025-11-26 04:32:58,240 | INFO     | all payload control threads have been joined
[2025-11-25 23:33:20] 2025-11-26 04:32:58,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:33:20] 2025-11-26 04:32:58,916 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:58,919 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:58,922 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,059 | INFO     | [data] control thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,193 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,218 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,245 | INFO     | [payload] control thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,421 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,529 | INFO     | all job control threads have been joined
[2025-11-25 23:33:20] 2025-11-26 04:32:59,571 | INFO     | [job] validate thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:32:59,922 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:00,261 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:00,385 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:00,410 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:00,534 | INFO     | [job] control thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:02,282 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:08,650 | INFO     | job.realtimelogging is not enabled
[2025-11-25 23:33:20] 2025-11-26 04:33:09,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:33:20] 2025-11-26 04:33:14,844 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:33:20] 2025-11-26 04:33:15,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413574354752)>', '<ExcThread(monitor, started 140412991817472)>']
[2025-11-25 23:33:20] 2025-11-26 04:33:16,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:33:20] 2025-11-26 04:33:16,010 | INFO     | [monitor] control thread has ended
[2025-11-25 23:33:20] 2025-11-26 04:33:20,138 | INFO     | all workflow threads have been joined
[2025-11-25 23:33:20] 2025-11-26 04:33:20,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:33:20] 2025-11-26 04:33:20,138 | INFO     | traces error code: 0
[2025-11-25 23:33:20] 2025-11-26 04:33:20,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:33:20] 2025-11-26 04:33:20,267 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:33:20] 2025-11-26 04:33:20,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:33:20] 2025-11-26 04:33:20,272 [wrapper] pilotpid: 2443
[2025-11-25 23:33:20] 2025-11-26 04:33:20,275 [wrapper] Pilot exit status: 0
[2025-11-25 23:33:20] 2025-11-26 04:33:20,285 [wrapper] pandaids: 6894238196
[2025-11-25 23:33:20] 2025-11-26 04:33:20,322 [wrapper] cleanup supervisor_pilot  8539 2444
[2025-11-25 23:33:20] 2025-11-26 04:33:20,325 [wrapper] Test setup, not cleaning
[2025-11-25 23:33:20] 2025-11-26 04:33:20,327 [wrapper] apfmon messages muted
[2025-11-25 23:33:20] 2025-11-26 04:33:20,329 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:33:20] 2025-11-26 04:33:20,331 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:33:20]  *** Error codes and diagnostics ***
[2025-11-25 23:33:20]     "exeErrorCode": 0,
[2025-11-25 23:33:20]     "exeErrorDiag": "",
[2025-11-25 23:33:20]     "pilotErrorCode": 0,
[2025-11-25 23:33:20]     "pilotErrorDiag": "",
[2025-11-25 23:33:20]  *** Listing of results directory ***
[2025-11-25 23:33:20] total 1318104
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 05:21 queuedata.json
[2025-11-25 23:33:20] -rwx------ 1 boincer umatlas     36292 Nov 24 05:22 runpilot2-wrapper.sh
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas       100 Nov 25 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:33:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 04:05 run_atlas
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas       105 Nov 25 04:05 job.xml
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas 409213085 Nov 25 04:05 EVNT.47493127._001006.pool.root.1
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 04:05 start_atlas.sh
[2025-11-25 23:33:20] drwxrwx--x 2 boincer umatlas      4096 Nov 25 04:05 shared
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 04:05 input.tar.gz
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas         0 Nov 25 04:05 boinc_lockfile
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 04:05 pandaJob.out
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas        57 Nov 25 04:05 setup.sh.local
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas    991858 Nov 25 04:05 agis_schedconf.cvmfs.json
[2025-11-25 23:33:20] drwx------ 5 boincer umatlas      4096 Nov 25 04:05 pilot3
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas       533 Nov 25 23:18 boinc_task_state.xml
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 23:30 init_data.xml
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas 912599459 Nov 25 23:32 HITS.47533962._000056.pool.root.1
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas        95 Nov 25 23:32 pilot_heartbeat.json
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas      1068 Nov 25 23:32 memory_monitor_summary.json
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas   1516240 Nov 25 23:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas   2311233 Nov 25 23:32 log.47533962._000056.job.log.tgz.1
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas      8660 Nov 25 23:32 heartbeat.json
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:33 boinc_mmap_file
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:33 wrapper_checkpoint.txt
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas      4624 Nov 25 23:33 pilotlog.txt
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas   9693740 Nov 25 23:33 log.47533962._000056.job.log.1
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas       353 Nov 25 23:33 output.list
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:33 runtime_log
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas  12021760 Nov 25 23:33 result.tar.gz
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas       668 Nov 25 23:33 YBBNDmJtih8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRbLKDmhw8yvm.diag
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 23:33 runtime_log.err
[2025-11-25 23:33:20] -rw-r--r-- 1 boincer umatlas     21294 Nov 25 23:33 stderr.txt
[2025-11-25 23:33:20] HITS file was successfully produced:
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas 912599459 Nov 25 23:32 shared/HITS.pool.root.1
[2025-11-25 23:33:20]  *** Contents of shared directory: ***
[2025-11-25 23:33:20] total 1303176
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas 409213085 Nov 25 04:05 ATLAS.root_0
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 04:05 start_atlas.sh
[2025-11-25 23:33:20] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 04:05 input.tar.gz
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas 912599459 Nov 25 23:32 HITS.pool.root.1
[2025-11-25 23:33:20] -rw------- 1 boincer umatlas  12021760 Nov 25 23:33 result.tar.gz
23:33:21 (30378): run_atlas exited; CPU time 541053.776759
23:33:21 (30378): called boinc_finish(0)

</stderr_txt>
]]>

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