Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:45 (8545): wrapper (7.7.26015): starting
03:38:45 (8545): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:38:45] Arguments: --nthreads 8
[2025-11-25 03:38:45] Threads: 8
[2025-11-25 03:38:45] Checking for CVMFS
[2025-11-25 03:38:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:38:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:38:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:38:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:38:45] 2.11.2.0 4697 115995 133392 153276 2 81 15965343 18432001 1885 130560 0 82693962 99.974 4933799 32170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:38:45] CVMFS is ok
[2025-11-25 03:38:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:38:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:38:45] Further information can be found at the LHC@home message board.
[2025-11-25 03:38:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:38:45] Checking for apptainer binary...
[2025-11-25 03:38:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:38:45] Running /usr/bin/apptainer --version
[2025-11-25 03:38:45] apptainer version 1.3.2-1.el7
[2025-11-25 03:38:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:38:46] c-206-21.aglt2.org
[2025-11-25 03:38:46] apptainer works
[2025-11-25 03:38:46] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:38:46] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:38:46] Starting ATLAS job with PandaID=6895373989
[2025-11-25 03:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:15:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:15:01] 2025-11-26 04:14:09,617 | INFO     | monitor loop #5016: job 0:6895373989 is in state 'finished'
[2025-11-25 23:15:01] 2025-11-26 04:14:09,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,142 | INFO     | time since job start (70513s) is within the limit (172800.0s)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,713 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 23:15:01] 2025-11-26 04:14:10,720 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2511.125
[2025-11-25 23:15:01] 2025-11-26 04:14:10,724 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895373989/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,725 | INFO     | extracted standard info from prmon json
[2025-11-25 23:15:01] 2025-11-26 04:14:10,726 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:15:01] 2025-11-26 04:14:10,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:15:01] 2025-11-26 04:14:10,757 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:15:01] 2025-11-26 04:14:10,759 | INFO     | sum of square deviations: 479019227322.01654
[2025-11-25 23:15:01] 2025-11-26 04:14:10,784 | INFO     | sum of deviations: 2157115150509.8171
[2025-11-25 23:15:01] 2025-11-26 04:14:10,784 | INFO     | mean x: 1764095191.1410034
[2025-11-25 23:15:01] 2025-11-26 04:14:10,784 | INFO     | mean y: 2872319.847750865
[2025-11-25 23:15:01] 2025-11-26 04:14:10,784 | INFO     | intersect: -7941185552.371337
[2025-11-25 23:15:01] 2025-11-26 04:14:10,785 | INFO     | chi2: 5.668099962447303
[2025-11-25 23:15:01] 2025-11-26 04:14:10,786 | INFO     | sum of square deviations: 472830667519.9532
[2025-11-25 23:15:01] 2025-11-26 04:14:10,810 | INFO     | sum of deviations: 2524092937485.018
[2025-11-25 23:15:01] 2025-11-26 04:14:10,810 | INFO     | mean x: 1764095038.643788
[2025-11-25 23:15:01] 2025-11-26 04:14:10,810 | INFO     | mean y: 2881359.317115552
[2025-11-25 23:15:01] 2025-11-26 04:14:10,811 | INFO     | intersect: -9414316242.201069
[2025-11-25 23:15:01] 2025-11-26 04:14:10,811 | INFO     | chi2: 2.7251772935241005
[2025-11-25 23:15:01] 2025-11-26 04:14:10,812 | INFO     | current chi2=2.7251772935241005 (change=51.92079688821407 %)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,813 | INFO     | sum of square deviations: 466695643605.3712
[2025-11-25 23:15:01] 2025-11-26 04:14:10,853 | INFO     | sum of deviations: 2639780482339.0137
[2025-11-25 23:15:01] 2025-11-26 04:14:10,854 | INFO     | mean x: 1764094886.146597
[2025-11-25 23:15:01] 2025-11-26 04:14:10,854 | INFO     | mean y: 2884232.964223386
[2025-11-25 23:15:01] 2025-11-26 04:14:10,854 | INFO     | intersect: -9975403143.940392
[2025-11-25 23:15:01] 2025-11-26 04:14:10,855 | INFO     | chi2: 2.322948687250022
[2025-11-25 23:15:01] 2025-11-26 04:14:10,856 | INFO     | current chi2=2.322948687250022 (change=14.759722504290027 %)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,856 | INFO     | right removable region: 1145
[2025-11-25 23:15:01] 2025-11-26 04:14:10,857 | INFO     | sum of square deviations: 472830285782.2395
[2025-11-25 23:15:01] 2025-11-26 04:14:10,904 | INFO     | sum of deviations: 1860502576228.1814
[2025-11-25 23:15:01] 2025-11-26 04:14:10,904 | INFO     | mean x: 1764095343.6429193
[2025-11-25 23:15:01] 2025-11-26 04:14:10,905 | INFO     | mean y: 2879620.397046047
[2025-11-25 23:15:01] 2025-11-26 04:14:10,905 | INFO     | intersect: -6938519926.651751
[2025-11-25 23:15:01] 2025-11-26 04:14:10,906 | INFO     | chi2: 3.6786135599008194
[2025-11-25 23:15:01] 2025-11-26 04:14:10,907 | INFO     | current chi2=3.6786135599008194 (change=35.099705646113684 %)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,908 | INFO     | sum of square deviations: 466694950341.24316
[2025-11-25 23:15:01] 2025-11-26 04:14:10,954 | INFO     | sum of deviations: 1784882122189.938
[2025-11-25 23:15:01] 2025-11-26 04:14:10,954 | INFO     | mean x: 1764095496.143979
[2025-11-25 23:15:01] 2025-11-26 04:14:10,954 | INFO     | mean y: 2881499.715532286
[2025-11-25 23:15:01] 2025-11-26 04:14:10,955 | INFO     | intersect: -6743929260.934168
[2025-11-25 23:15:01] 2025-11-26 04:14:10,956 | INFO     | chi2: 3.626795070679763
[2025-11-25 23:15:01] 2025-11-26 04:14:10,956 | INFO     | current chi2=3.626795070679763 (change=1.408641825983308 %)
[2025-11-25 23:15:01] 2025-11-26 04:14:10,957 | INFO     | left removable region: 20
[2025-11-25 23:15:01] 2025-11-26 04:14:10,958 | INFO     | sum of square deviations: 441506725383.7116
[2025-11-25 23:15:01] 2025-11-26 04:14:11,002 | INFO     | sum of deviations: 2187017366155.5076
[2025-11-25 23:15:01] 2025-11-26 04:14:11,003 | INFO     | mean x: 1764095465.6506667
[2025-11-25 23:15:01] 2025-11-26 04:14:11,003 | INFO     | mean y: 2896386.4542222223
[2025-11-25 23:15:01] 2025-11-26 04:14:11,003 | INFO     | intersect: -8735605650.136795
[2025-11-25 23:15:01] 2025-11-26 04:14:11,005 | INFO     | chi2: 0.2164460729797958
[2025-11-25 23:15:01] 2025-11-26 04:14:11,005 | INFO     | current memory leak: 4.95 B/s (using 1125 data points, chi2=0.22)
[2025-11-25 23:15:01] 2025-11-26 04:14:11,006 | INFO     | could have reported an average CPU frequency of 2628 MHz (42 samples)
[2025-11-25 23:15:01] 2025-11-26 04:14:11,006 | INFO     | ..............................
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . Timing measurements:
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . get job = 0 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . initial setup = 2 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . payload setup = 5 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . stage-in = 0 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,007 | INFO     | . payload execution = 70479 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,008 | INFO     | . stage-out = 4 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,008 | INFO     | . log creation = 0 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,008 | INFO     | ..............................
[2025-11-25 23:15:01] 2025-11-26 04:14:11,214 | INFO     | 
[2025-11-25 23:15:01] 2025-11-26 04:14:11,214 | INFO     | job summary report
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | --------------------------------------------------
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | PanDA job id: 6895373989
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | task id: 47556137
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | errors: (none)
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:15:01] 2025-11-26 04:14:11,215 | INFO     | pilot state: finished 
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | transexitcode: 0
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | exeerrorcode: 0
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | exeerrordiag: 
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | exitcode: 0
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | exitmsg: OK
[2025-11-25 23:15:01] 2025-11-26 04:14:11,216 | INFO     | cpuconsumptiontime: 542418 s
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | nevents: 1000
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | neventsw: 0
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | pid: 23848
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | pgrp: 23848
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | corecount: 8
[2025-11-25 23:15:01] 2025-11-26 04:14:11,217 | INFO     | event service: False
[2025-11-25 23:15:01] 2025-11-26 04:14:11,218 | INFO     | sizes: {0: 2284314, 1: 2284314, 4: 2284604, 11: 2284632, 70488: 2341291, 70489: 2341290, 70494: 2350524, 70498: 2350714}
[2025-11-25 23:15:01] 2025-11-26 04:14:11,218 | INFO     | --------------------------------------------------
[2025-11-25 23:15:01] 2025-11-26 04:14:11,218 | INFO     | 
[2025-11-25 23:15:01] 2025-11-26 04:14:11,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 23:15:01] 2025-11-26 04:14:11,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,242 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:15:01] 2025-11-26 04:14:11,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,242 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:15:01] 2025-11-26 04:14:11,242 | INFO     | job 6895373989 has completed (purged errors)
[2025-11-25 23:15:01] 2025-11-26 04:14:11,242 | INFO     | overall cleanup function is called
[2025-11-25 23:15:01] 2025-11-26 04:14:12,258 | INFO     | --- collectZombieJob: --- 10, [23848]
[2025-11-25 23:15:01] 2025-11-26 04:14:12,259 | INFO     | zombie collector waiting for pid 23848
[2025-11-25 23:15:01] 2025-11-26 04:14:12,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:15:01] 2025-11-26 04:14:12,259 | INFO     | collected zombie processes
[2025-11-25 23:15:01] 2025-11-26 04:14:12,259 | INFO     | will attempt to kill all subprocesses of pid=23848
[2025-11-25 23:15:01] 2025-11-26 04:14:12,429 | INFO     | process IDs to be killed: [23848] (in reverse order)
[2025-11-25 23:15:01] 2025-11-26 04:14:12,489 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:15:01] 2025-11-26 04:14:12,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:15:01] 2025-11-26 04:14:12,495 | INFO     | did not find any defunct processes belonging to 23848
[2025-11-25 23:15:01] 2025-11-26 04:14:12,500 | INFO     | did not find any defunct processes belonging to 23848
[2025-11-25 23:15:01] 2025-11-26 04:14:12,502 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:15:01] 2025-11-26 04:14:12,502 | INFO     | ready for new job
[2025-11-25 23:15:01] 2025-11-26 04:14:12,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:15:01] 2025-11-26 04:14:12,507 | INFO     | ***************************************
[2025-11-25 23:15:01] 2025-11-26 04:14:12,507 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:15:01] 2025-11-26 04:14:12,508 | INFO     | ***************************************
[2025-11-25 23:15:01] 2025-11-26 04:14:12,508 | INFO     | 
[2025-11-25 23:15:01] 2025-11-26 04:14:12,509 | INFO     | architecture information:
[2025-11-25 23:15:01] 2025-11-26 04:14:12,510 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:15:01] 2025-11-26 04:14:12,523 | INFO     | cat /etc/os-release:
[2025-11-25 23:15:01] NAME="CentOS Linux"
[2025-11-25 23:15:01] VERSION="7 (Core)"
[2025-11-25 23:15:01] ID="centos"
[2025-11-25 23:15:01] ID_LIKE="rhel fedora"
[2025-11-25 23:15:01] VERSION_ID="7"
[2025-11-25 23:15:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:15:01] ANSI_COLOR="0;31"
[2025-11-25 23:15:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:15:01] HOME_URL="https://www.centos.org/"
[2025-11-25 23:15:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:15:01] 
[2025-11-25 23:15:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:15:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:15:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:15:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:15:01] 
[2025-11-25 23:15:01] 2025-11-26 04:14:12,523 | INFO     | ***************************************
[2025-11-25 23:15:01] 2025-11-26 04:14:13,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 23:15:01] 2025-11-26 04:14:13,044 | INFO     | sufficient remaining disk space (24771559424 B)
[2025-11-25 23:15:01] 2025-11-26 04:14:13,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:15:01] 2025-11-26 04:14:13,045 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:15:01] 2025-11-26 04:14:13,045 | INFO     | update_server=False
[2025-11-25 23:15:01] 2025-11-26 04:14:13,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:15:01] 2025-11-26 04:14:13,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:15:01] 2025-11-26 04:14:13,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:15:01] 2025-11-26 04:14:13,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:15:01] 2025-11-26 04:14:13,126 | INFO     | aborting loop
[2025-11-25 23:15:01] 2025-11-26 04:14:13,600 | INFO     | all job control threads have been joined
[2025-11-25 23:15:01] 2025-11-26 04:14:13,874 | INFO     | all payload control threads have been joined
[2025-11-25 23:15:01] 2025-11-26 04:14:14,034 | INFO     | all data control threads have been joined
[2025-11-25 23:15:01] 2025-11-26 04:14:14,053 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,053 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,131 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,160 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,169 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,353 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:15:01] 2025-11-26 04:14:14,607 | INFO     | [job] control thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,726 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,763 | INFO     | [job] validate thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,765 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:14,881 | INFO     | [payload] control thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:15,040 | INFO     | [data] control thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:15,418 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:16,529 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:17,050 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:15:01] 2025-11-26 04:14:43,356 | INFO     | PID=12229 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:15:01] 2025-11-26 04:14:43,357 | INFO     | .. there are 3 such processes running
[2025-11-25 23:15:01] 2025-11-26 04:14:43,358 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:15:01] 2025-11-26 04:14:43,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:15:01] 2025-11-26 04:14:43,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:15:01] 2025-11-26 04:14:54,337 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:15:01] 2025-11-26 04:14:55,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067167446848)>', '<ExcThread(monitor, started 140066601039616)>']
[2025-11-25 23:15:01] 2025-11-26 04:14:56,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:15:01] 2025-11-26 04:14:56,428 | INFO     | [monitor] control thread has ended
[2025-11-25 23:15:01] 2025-11-26 04:15:00,949 | INFO     | all workflow threads have been joined
[2025-11-25 23:15:01] 2025-11-26 04:15:00,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:15:01] 2025-11-26 04:15:00,950 | INFO     | traces error code: 0
[2025-11-25 23:15:01] 2025-11-26 04:15:00,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:15:01] 2025-11-26 04:15:01,084 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:15:01] 2025-11-26 04:15:01,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:15:01] 2025-11-26 04:15:01,090 [wrapper] pilotpid: 12229
[2025-11-25 23:15:01] 2025-11-26 04:15:01,092 [wrapper] Pilot exit status: 0
[2025-11-25 23:15:01] 2025-11-26 04:15:01,102 [wrapper] pandaids: 6895373989
[2025-11-25 23:15:01] 2025-11-26 04:15:01,141 [wrapper] cleanup supervisor_pilot  9790 12230
[2025-11-25 23:15:01] 2025-11-26 04:15:01,143 [wrapper] Test setup, not cleaning
[2025-11-25 23:15:01] 2025-11-26 04:15:01,145 [wrapper] apfmon messages muted
[2025-11-25 23:15:01] 2025-11-26 04:15:01,147 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:15:01] 2025-11-26 04:15:01,149 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:15:01]  *** Error codes and diagnostics ***
[2025-11-25 23:15:01]     "exeErrorCode": 0,
[2025-11-25 23:15:01]     "exeErrorDiag": "",
[2025-11-25 23:15:01]     "pilotErrorCode": 0,
[2025-11-25 23:15:01]     "pilotErrorDiag": "",
[2025-11-25 23:15:01]  *** Listing of results directory ***
[2025-11-25 23:15:01] total 1330756
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:35 queuedata.json
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-25 23:15:01] -rwx------ 1 boincer umatlas     36292 Nov 23 17:37 runpilot2-wrapper.sh
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas       100 Nov 25 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:15:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 03:38 run_atlas
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas       105 Nov 25 03:38 job.xml
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas 411758003 Nov 25 03:38 EVNT.47483658._000928.pool.root.1
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:38 start_atlas.sh
[2025-11-25 23:15:01] drwxrwx--x 2 boincer umatlas      4096 Nov 25 03:38 shared
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 03:38 input.tar.gz
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas         0 Nov 25 03:38 boinc_lockfile
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 03:38 pandaJob.out
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas        57 Nov 25 03:38 setup.sh.local
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas    991858 Nov 25 03:38 agis_schedconf.cvmfs.json
[2025-11-25 23:15:01] drwx------ 5 boincer umatlas      4096 Nov 25 03:38 pilot3
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas       533 Nov 25 23:01 boinc_task_state.xml
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 23:11 init_data.xml
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas 922909551 Nov 25 23:13 HITS.47556137._009147.pool.root.1
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas      1065 Nov 25 23:13 memory_monitor_summary.json
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas   1516240 Nov 25 23:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas   2319484 Nov 25 23:14 log.47556137._009147.job.log.tgz.1
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas      8665 Nov 25 23:14 heartbeat.json
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:14 boinc_mmap_file
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:14 wrapper_checkpoint.txt
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas        95 Nov 25 23:14 pilot_heartbeat.json
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas      4821 Nov 25 23:15 pilotlog.txt
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas   9731231 Nov 25 23:15 log.47556137._009147.job.log.1
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas       353 Nov 25 23:15 output.list
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:15 runtime_log
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas  12072960 Nov 25 23:15 result.tar.gz
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas       668 Nov 25 23:15 u45LDmbtXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmFLKDmYMqSMn.diag
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 23:15 runtime_log.err
[2025-11-25 23:15:01] -rw-r--r-- 1 boincer umatlas     21293 Nov 25 23:15 stderr.txt
[2025-11-25 23:15:01] HITS file was successfully produced:
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas 922909551 Nov 25 23:13 shared/HITS.pool.root.1
[2025-11-25 23:15:01]  *** Contents of shared directory: ***
[2025-11-25 23:15:01] total 1315784
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas 411758003 Nov 25 03:38 ATLAS.root_0
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:38 start_atlas.sh
[2025-11-25 23:15:01] -rw-r--r-- 2 boincer umatlas    590102 Nov 25 03:38 input.tar.gz
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas 922909551 Nov 25 23:13 HITS.pool.root.1
[2025-11-25 23:15:01] -rw------- 1 boincer umatlas  12072960 Nov 25 23:15 result.tar.gz
23:15:02 (8545): run_atlas exited; CPU time 541082.534053
23:15:02 (8545): called boinc_finish(0)

</stderr_txt>
]]>

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