Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:00:37 (3903189): wrapper (7.7.26015): starting
04:00:37 (3903189): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:00:37] Arguments: --nthreads 8
[2025-11-25 04:00:37] Threads: 8
[2025-11-25 04:00:37] Checking for CVMFS
[2025-11-25 04:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:00:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:00:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:00:39] 2.13.3.0 22787 28352 242664 153276 3 622 20604645 40960001 50322 16776704 0 414905525 99.756 240961163 48050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 04:00:39] CVMFS is ok
[2025-11-25 04:00:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:00:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:00:39] Further information can be found at the LHC@home message board.
[2025-11-25 04:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:00:39] Checking for apptainer binary...
[2025-11-25 04:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:00:39] Running /usr/bin/apptainer --version
[2025-11-25 04:00:39] apptainer version 1.4.4-1.el9
[2025-11-25 04:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:00:40] c8-6-11.aglt2.org
[2025-11-25 04:00:40] apptainer works
[2025-11-25 04:00:40] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:00:40] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:00:40] Starting ATLAS job with PandaID=6895372976
[2025-11-25 04:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:10:52]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:10:52] 2025-11-25 16:10:12,624 | INFO     | mean x: 1764074062.0603864
[2025-11-25 11:10:52] 2025-11-25 16:10:12,624 | INFO     | mean y: 2829475.086956522
[2025-11-25 11:10:52] 2025-11-25 16:10:12,624 | INFO     | intersect: -19814596707.35555
[2025-11-25 11:10:52] 2025-11-25 16:10:12,624 | INFO     | chi2: 10.325779006615225
[2025-11-25 11:10:52] 2025-11-25 16:10:12,624 | INFO     | current chi2=10.325779006615225 (change=26.846588205465594 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,625 | INFO     | sum of square deviations: 21214735728.401024
[2025-11-25 11:10:52] 2025-11-25 16:10:12,633 | INFO     | sum of deviations: 395010822131.70404
[2025-11-25 11:10:52] 2025-11-25 16:10:12,633 | INFO     | mean x: 1764073909.5672371
[2025-11-25 11:10:52] 2025-11-25 16:10:12,633 | INFO     | mean y: 2858118.4107579463
[2025-11-25 11:10:52] 2025-11-25 16:10:12,633 | INFO     | intersect: -32843569677.829544
[2025-11-25 11:10:52] 2025-11-25 16:10:12,634 | INFO     | chi2: 6.589510434019322
[2025-11-25 11:10:52] 2025-11-25 16:10:12,634 | INFO     | current chi2=6.589510434019322 (change=36.1838905345762 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,634 | INFO     | sum of square deviations: 20446215331.77243
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | sum of deviations: 486085668898.5196
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | mean x: 1764073757.0742574
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | mean y: 2876101.4826732674
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | intersect: -41935984380.988396
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | chi2: 4.499258009693583
[2025-11-25 11:10:52] 2025-11-25 16:10:12,636 | INFO     | current chi2=4.499258009693583 (change=31.72090620775864 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,640 | INFO     | sum of square deviations: 19696412297.568977
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | sum of deviations: 475868125416.44916
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | mean x: 1764073604.5739348
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | mean y: 2874023.4085213034
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | intersect: -42617395425.80724
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | chi2: 4.497806378057969
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | current chi2=4.497806378057969 (change=0.032263800664172386 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,642 | INFO     | right removable region: 398
[2025-11-25 11:10:52] 2025-11-25 16:10:12,643 | INFO     | sum of square deviations: 22002138217.490383
[2025-11-25 11:10:52] 2025-11-25 16:10:12,649 | INFO     | sum of deviations: -56000163633.7249
[2025-11-25 11:10:52] 2025-11-25 16:10:12,649 | INFO     | mean x: 1764074367.0603864
[2025-11-25 11:10:52] 2025-11-25 16:10:12,649 | INFO     | mean y: 2832229.0289855073
[2025-11-25 11:10:52] 2025-11-25 16:10:12,649 | INFO     | intersect: 4492780080.502367
[2025-11-25 11:10:52] 2025-11-25 16:10:12,650 | INFO     | chi2: 10.29225469394371
[2025-11-25 11:10:52] 2025-11-25 16:10:12,650 | INFO     | current chi2=10.29225469394371 (change=27.084092596022174 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,650 | INFO     | sum of square deviations: 21214503074.660156
[2025-11-25 11:10:52] 2025-11-25 16:10:12,656 | INFO     | sum of deviations: -95565535583.81424
[2025-11-25 11:10:52] 2025-11-25 16:10:12,656 | INFO     | mean x: 1764074519.5623472
[2025-11-25 11:10:52] 2025-11-25 16:10:12,656 | INFO     | mean y: 2839857.9731051344
[2025-11-25 11:10:52] 2025-11-25 16:10:12,656 | INFO     | intersect: 7949513210.558157
[2025-11-25 11:10:52] 2025-11-25 16:10:12,657 | INFO     | chi2: 9.974647106568892
[2025-11-25 11:10:52] 2025-11-25 16:10:12,657 | INFO     | current chi2=9.974647106568892 (change=3.0858893101596903 %)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,657 | INFO     | left removable region: 20
[2025-11-25 11:10:52] 2025-11-25 16:10:12,657 | INFO     | sum of square deviations: 16747080193.29101
[2025-11-25 11:10:52] 2025-11-25 16:10:12,662 | INFO     | sum of deviations: 239434757146.27512
[2025-11-25 11:10:52] 2025-11-25 16:10:12,662 | INFO     | mean x: 1764074184.084656
[2025-11-25 11:10:52] 2025-11-25 16:10:12,662 | INFO     | mean y: 2923427.1164021166
[2025-11-25 11:10:52] 2025-11-25 16:10:12,662 | INFO     | intersect: -25218229692.07219
[2025-11-25 11:10:52] 2025-11-25 16:10:12,662 | INFO     | chi2: 0.05962083255565964
[2025-11-25 11:10:52] 2025-11-25 16:10:12,663 | INFO     | current memory leak: 14.30 B/s (using 378 data points, chi2=0.06)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | could have reported an average CPU frequency of 3799 MHz (17 samples)
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | ..............................
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . Timing measurements:
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . get job = 0 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . initial setup = 7 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . payload setup = 44 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . stage-in = 0 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . payload execution = 25536 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . stage-out = 5 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | . log creation = 1 s
[2025-11-25 11:10:52] 2025-11-25 16:10:12,667 | INFO     | ..............................
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | 
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | job summary report
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | --------------------------------------------------
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | PanDA job id: 6895372976
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | task id: 47556149
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | errors: (none)
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | pilot state: finished 
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | transexitcode: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | exeerrorcode: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | exeerrordiag: 
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | exitcode: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | exitmsg: OK
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | cpuconsumptiontime: 133855 s
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | nevents: 1000
[2025-11-25 11:10:52] 2025-11-25 16:10:13,074 | INFO     | neventsw: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | pid: 3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | pgrp: 3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | corecount: 8
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | event service: False
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | sizes: {0: 2284143, 1: 2284171, 2: 2284342, 13: 2284370, 24: 2284426, 33: 2284716, 34: 2284900, 25585: 2321742, 25591: 2330736, 25592: 2330792, 25626: 2331102}
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | --------------------------------------------------
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | 
[2025-11-25 11:10:52] 2025-11-25 16:10:13,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | job 6895372976 has completed (purged errors)
[2025-11-25 11:10:52] 2025-11-25 16:10:13,340 | INFO     | overall cleanup function is called
[2025-11-25 11:10:52] 2025-11-25 16:10:14,334 | INFO     | PID=3920095 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:10:52] 2025-11-25 16:10:14,338 | INFO     | .. there are 69 such processes running
[2025-11-25 11:10:52] 2025-11-25 16:10:14,410 | INFO     | --- collectZombieJob: --- 10, [3951329]
[2025-11-25 11:10:52] 2025-11-25 16:10:14,410 | INFO     | zombie collector waiting for pid 3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:14,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:10:52] 2025-11-25 16:10:14,410 | INFO     | collected zombie processes
[2025-11-25 11:10:52] 2025-11-25 16:10:14,410 | INFO     | will attempt to kill all subprocesses of pid=3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:15,434 | INFO     | process IDs to be killed: [3951329] (in reverse order)
[2025-11-25 11:10:52] 2025-11-25 16:10:15,778 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:10:52] 2025-11-25 16:10:15,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:10:52] 2025-11-25 16:10:15,847 | INFO     | did not find any defunct processes belonging to 3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:15,929 | INFO     | did not find any defunct processes belonging to 3951329
[2025-11-25 11:10:52] 2025-11-25 16:10:15,932 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:10:52] 2025-11-25 16:10:15,932 | INFO     | ready for new job
[2025-11-25 11:10:52] 2025-11-25 16:10:15,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:10:52] 2025-11-25 16:10:15,934 | INFO     | ***************************************
[2025-11-25 11:10:52] 2025-11-25 16:10:15,934 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:10:52] 2025-11-25 16:10:15,934 | INFO     | ***************************************
[2025-11-25 11:10:52] 2025-11-25 16:10:15,934 | INFO     | 
[2025-11-25 11:10:52] 2025-11-25 16:10:15,941 | INFO     | architecture information:
[2025-11-25 11:10:52] 2025-11-25 16:10:15,954 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:10:52] 2025-11-25 16:10:16,017 | INFO     | cat /etc/os-release:
[2025-11-25 11:10:52] NAME="CentOS Linux"
[2025-11-25 11:10:52] VERSION="7 (Core)"
[2025-11-25 11:10:52] ID="centos"
[2025-11-25 11:10:52] ID_LIKE="rhel fedora"
[2025-11-25 11:10:52] VERSION_ID="7"
[2025-11-25 11:10:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:10:52] ANSI_COLOR="0;31"
[2025-11-25 11:10:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:10:52] HOME_URL="https://www.centos.org/"
[2025-11-25 11:10:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:10:52] 
[2025-11-25 11:10:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:10:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:10:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:10:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:10:52] 
[2025-11-25 11:10:52] 2025-11-25 16:10:16,017 | INFO     | ***************************************
[2025-11-25 11:10:52] 2025-11-25 16:10:16,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 11:10:52] 2025-11-25 16:10:16,535 | INFO     | sufficient remaining disk space (156341633024 B)
[2025-11-25 11:10:52] 2025-11-25 16:10:16,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:10:52] 2025-11-25 16:10:16,536 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:10:52] 2025-11-25 16:10:16,536 | INFO     | update_server=False
[2025-11-25 11:10:52] 2025-11-25 16:10:16,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:10:52] 2025-11-25 16:10:16,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:10:52] 2025-11-25 16:10:16,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:10:52] 2025-11-25 16:10:16,725 | INFO     | all data control threads have been joined
[2025-11-25 11:10:52] 2025-11-25 16:10:16,744 | INFO     | all job control threads have been joined
[2025-11-25 11:10:52] 2025-11-25 16:10:16,990 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 11:10:52] 2025-11-25 16:10:16,990 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 11:10:52] 2025-11-25 16:10:16,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:10:52] 2025-11-25 16:10:16,990 | INFO     | will abort loop
[2025-11-25 11:10:52] 2025-11-25 16:10:17,553 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:17,600 | INFO     | all payload control threads have been joined
[2025-11-25 11:10:52] 2025-11-25 16:10:17,677 | INFO     | [job] validate thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:17,732 | INFO     | [data] control thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:17,771 | INFO     | [job] control thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:17,789 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:17,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:10:52] 2025-11-25 16:10:17,996 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,096 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,096 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,162 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,471 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,549 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,606 | INFO     | [payload] control thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,804 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,817 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:18,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:20,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:10:52] 2025-11-25 16:10:44,316 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:10:52] 2025-11-25 16:10:46,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896029058880)>', '<ExcThread(monitor, started 139895389542144)>']
[2025-11-25 11:10:52] 2025-11-25 16:10:47,434 | INFO     | PID=3920095 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:10:52] 2025-11-25 16:10:47,435 | INFO     | .. there are 70 such processes running
[2025-11-25 11:10:52] 2025-11-25 16:10:47,435 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:10:52] 2025-11-25 16:10:47,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:10:52] 2025-11-25 16:10:47,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:10:52] 2025-11-25 16:10:47,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:10:52] 2025-11-25 16:10:47,436 | INFO     | [monitor] control thread has ended
[2025-11-25 11:10:52] 2025-11-25 16:10:51,222 | INFO     | all workflow threads have been joined
[2025-11-25 11:10:52] 2025-11-25 16:10:51,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:10:52] 2025-11-25 16:10:51,222 | INFO     | traces error code: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:51,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:10:52] 2025-11-25 16:10:51,399 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:10:52] 2025-11-25 16:10:51,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:10:52] 2025-11-25 16:10:51,432 [wrapper] pilotpid: 3920095
[2025-11-25 11:10:52] 2025-11-25 16:10:51,462 [wrapper] Pilot exit status: 0
[2025-11-25 11:10:52] 2025-11-25 16:10:51,555 [wrapper] pandaids: 6895372976
[2025-11-25 11:10:52] 2025-11-25 16:10:51,771 [wrapper] cleanup supervisor_pilot 1265772 3920096
[2025-11-25 11:10:52] 2025-11-25 16:10:51,794 [wrapper] Test setup, not cleaning
[2025-11-25 11:10:52] 2025-11-25 16:10:51,821 [wrapper] apfmon messages muted
[2025-11-25 11:10:52] 2025-11-25 16:10:51,841 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:10:52] 2025-11-25 16:10:51,844 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:10:52]  *** Error codes and diagnostics ***
[2025-11-25 11:10:52]     "exeErrorCode": 0,
[2025-11-25 11:10:52]     "exeErrorDiag": "",
[2025-11-25 11:10:52]     "pilotErrorCode": 0,
[2025-11-25 11:10:52]     "pilotErrorDiag": "",
[2025-11-25 11:10:52]  *** Listing of results directory ***
[2025-11-25 11:10:52] total 1309020
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:10 pilot3.tar.gz
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:26 queuedata.json
[2025-11-25 11:10:52] -rwx------. 1 boincer umatlas     36292 Nov 23 17:26 runpilot2-wrapper.sh
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas       100 Nov 25 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:10:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 04:00 run_atlas
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas       105 Nov 25 04:00 job.xml
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas 408829156 Nov 25 04:00 EVNT.47483658._001198.pool.root.1
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 04:00 start_atlas.sh
[2025-11-25 11:10:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 04:00 shared
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 04:00 input.tar.gz
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas         0 Nov 25 04:00 boinc_lockfile
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 04:00 pandaJob.out
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas        57 Nov 25 04:00 setup.sh.local
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas    991858 Nov 25 04:01 agis_schedconf.cvmfs.json
[2025-11-25 11:10:52] drwx------. 5 boincer umatlas      4096 Nov 25 04:02 pilot3
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas       532 Nov 25 10:54 boinc_task_state.xml
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas      7174 Nov 25 11:03 init_data.xml
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas 917689162 Nov 25 11:08 HITS.47556149._001848.pool.root.1
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas      1050 Nov 25 11:09 memory_monitor_summary.json
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas   1516240 Nov 25 11:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas   1693469 Nov 25 11:09 log.47556149._001848.job.log.tgz.1
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas      8580 Nov 25 11:10 heartbeat.json
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas        95 Nov 25 11:10 pilot_heartbeat.json
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas        29 Nov 25 11:10 wrapper_checkpoint.txt
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 11:10 boinc_mmap_file
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas      5011 Nov 25 11:10 pilotlog.txt
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas   3303251 Nov 25 11:10 log.47556149._001848.job.log.1
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas       353 Nov 25 11:10 output.list
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas       620 Nov 25 11:10 runtime_log
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas   5017600 Nov 25 11:10 result.tar.gz
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas      9338 Nov 25 11:10 runtime_log.err
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas       660 Nov 25 11:10 BDNNDmOiXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQELKDmwewRpm.diag
[2025-11-25 11:10:52] -rw-r--r--. 1 boincer umatlas     21357 Nov 25 11:10 stderr.txt
[2025-11-25 11:10:52] HITS file was successfully produced:
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas 917689162 Nov 25 11:08 shared/HITS.pool.root.1
[2025-11-25 11:10:52]  *** Contents of shared directory: ***
[2025-11-25 11:10:52] total 1300936
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas 408829156 Nov 25 04:00 ATLAS.root_0
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 04:00 start_atlas.sh
[2025-11-25 11:10:52] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 04:00 input.tar.gz
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas 917689162 Nov 25 11:08 HITS.pool.root.1
[2025-11-25 11:10:52] -rw-------. 1 boincer umatlas   5017600 Nov 25 11:10 result.tar.gz
11:10:53 (3903189): run_atlas exited; CPU time 134403.209586
11:10:53 (3903189): called boinc_finish(0)

</stderr_txt>
]]>

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