Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:46:47 (4019290): wrapper (7.7.26015): starting
09:46:47 (4019290): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 09:46:47] Arguments: --nthreads 3
[2025-11-25 09:46:47] Threads: 3
[2025-11-25 09:46:47] Checking for CVMFS
[2025-11-25 09:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:46:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:46:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:46:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:46:49] 2.9.2.0 4019415 0 29984 153276 3 1 35135862 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 09:46:49] CVMFS is ok
[2025-11-25 09:46:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:46:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 09:46:49] Further information can be found at the LHC@home message board.
[2025-11-25 09:46:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:46:49] Checking for apptainer binary...
[2025-11-25 09:46:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:46:49] Running /usr/bin/apptainer --version
[2025-11-25 09:46:49] apptainer version 1.4.1-1.1
[2025-11-25 09:46:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:46:49] thA335
[2025-11-25 09:46:49] apptainer works
[2025-11-25 09:46:49] Set ATHENA_PROC_NUMBER=3
[2025-11-25 09:46:49] Set ATHENA_CORE_NUMBER=3
[2025-11-25 09:46:49] Starting ATLAS job with PandaID=6891583705
[2025-11-25 09:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:51:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:51:10] 
[2025-11-25 09:51:10] 2025-11-25 08:50:18,162 | INFO     | ***************************************
[2025-11-25 09:51:10] 2025-11-25 08:50:18,665 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 09:51:10] 2025-11-25 08:50:18,678 | INFO     | sufficient remaining disk space (827300249600 B)
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | INFO     | update_server=False
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | INFO     | aborting loop
[2025-11-25 09:51:10] 2025-11-25 08:50:18,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:51:10] 2025-11-25 08:50:19,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:51:10] 2025-11-25 08:50:19,334 | INFO     | all data control threads have been joined
[2025-11-25 09:51:10] 2025-11-25 08:50:19,636 | INFO     | all payload control threads have been joined
[2025-11-25 09:51:10] 2025-11-25 08:50:19,685 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:19,686 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:19,686 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,244 | INFO     | all job control threads have been joined
[2025-11-25 09:51:10] 2025-11-25 08:50:20,266 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,340 | INFO     | [data] control thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,479 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,642 | INFO     | [payload] control thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,642 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,649 | INFO     | [job] validate thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,734 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:20,782 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:21,110 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:21,218 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:21,250 | INFO     | [job] control thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:21,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:51:10] 2025-11-25 08:50:25,361 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:51:10] 2025-11-25 08:50:48,814 | INFO     | PID=4023496 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 09:51:10] 2025-11-25 08:50:48,814 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:51:10] 2025-11-25 08:50:48,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:51:10] 2025-11-25 08:50:48,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:51:10] 2025-11-25 08:51:04,016 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:51:10] 2025-11-25 08:51:05,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962440095552)>', '<ExcThread(monitor, started 139961927964416)>']
[2025-11-25 09:51:10] 2025-11-25 08:51:05,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:51:10] 2025-11-25 08:51:05,903 | INFO     | [monitor] control thread has ended
[2025-11-25 09:51:10] 2025-11-25 08:51:10,232 | INFO     | all workflow threads have been joined
[2025-11-25 09:51:10] 2025-11-25 08:51:10,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:51:10] 2025-11-25 08:51:10,233 | INFO     | traces error code: 0
[2025-11-25 09:51:10] 2025-11-25 08:51:10,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:51:10] 2025-11-25 08:51:10,281 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:51:10] 2025-11-25 08:51:10,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:51:10] 2025-11-25 08:51:10,287 [wrapper] pilotpid: 4023496
[2025-11-25 09:51:10] 2025-11-25 08:51:10,290 [wrapper] Pilot exit status: 0
[2025-11-25 09:51:10] 2025-11-25 08:51:10,297 [wrapper] pandaids: 6891583705
[2025-11-25 09:51:10] 2025-11-25 08:51:10,314 [wrapper] cleanup supervisor_pilot 4023502 4023497
[2025-11-25 09:51:10] 2025-11-25 08:51:10,317 [wrapper] Test setup, not cleaning
[2025-11-25 09:51:10] 2025-11-25 08:51:10,320 [wrapper] apfmon messages muted
[2025-11-25 09:51:10] 2025-11-25 08:51:10,323 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:51:10] 2025-11-25 08:51:10,325 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:51:10]  *** Error codes and diagnostics ***
[2025-11-25 09:51:10]     "exeErrorCode": 65,
[2025-11-25 09:51:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 09:51:10]     "pilotErrorCode": 1305,
[2025-11-25 09:51:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 09:51:10]  *** Listing of results directory ***
[2025-11-25 09:51:10] total 407412
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:05 queuedata.json
[2025-11-25 09:51:10] -rwx------ 1 boinc boinc     36292 Nov 18 18:06 runpilot2-wrapper.sh
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc       100 Nov 25 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:51:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 09:46 run_atlas
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc       105 Nov 25 09:46 job.xml
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc 412999535 Nov 25 09:46 EVNT.47493065._000437.pool.root.1
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc    590099 Nov 25 09:46 input.tar.gz
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc     15120 Nov 25 09:46 start_atlas.sh
[2025-11-25 09:51:10] drwxrwx--x 2 boinc boinc      4096 Nov 25 09:46 shared
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc         0 Nov 25 09:46 boinc_setup_complete
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      6196 Nov 25 09:46 init_data.xml
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc         0 Nov 25 09:46 boinc_lockfile
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      2772 Nov 25 09:46 pandaJob.out
[2025-11-25 09:51:10] -rw------- 1 boinc boinc    991858 Nov 25 09:47 agis_schedconf.cvmfs.json
[2025-11-25 09:51:10] -rw------- 1 boinc boinc   1516240 Nov 25 09:47 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:51:10] drwx------ 5 boinc boinc      4096 Nov 25 09:47 pilot3
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc       522 Nov 25 09:47 boinc_task_state.xml
[2025-11-25 09:51:10] -rw------- 1 boinc boinc       939 Nov 25 09:48 memory_monitor_summary.json
[2025-11-25 09:51:10] -rw------- 1 boinc boinc     56197 Nov 25 09:48 log.47493068._004366.job.log.tgz.1
[2025-11-25 09:51:10] -rw------- 1 boinc boinc        95 Nov 25 09:50 pilot_heartbeat.json
[2025-11-25 09:51:10] -rw------- 1 boinc boinc      8413 Nov 25 09:50 heartbeat.json
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      8192 Nov 25 09:50 boinc_mmap_file
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc        22 Nov 25 09:50 wrapper_checkpoint.txt
[2025-11-25 09:51:10] -rw------- 1 boinc boinc      4752 Nov 25 09:51 pilotlog.txt
[2025-11-25 09:51:10] -rw------- 1 boinc boinc     93108 Nov 25 09:51 log.47493068._004366.job.log.1
[2025-11-25 09:51:10] -rw------- 1 boinc boinc       186 Nov 25 09:51 output.list
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc       620 Nov 25 09:51 runtime_log
[2025-11-25 09:51:10] -rw------- 1 boinc boinc    163840 Nov 25 09:51 result.tar.gz
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      8624 Nov 25 09:51 runtime_log.err
[2025-11-25 09:51:10] -rw------- 1 boinc boinc       649 Nov 25 09:51 8tYMDmYLef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoxFKDml5qvem.diag
[2025-11-25 09:51:10] -rw-r--r-- 1 boinc boinc      8513 Nov 25 09:51 stderr.txt
[2025-11-25 09:51:10] No HITS result produced
[2025-11-25 09:51:10]  *** Contents of shared directory: ***
[2025-11-25 09:51:10] total 404080
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc 412999535 Nov 25 09:46 ATLAS.root_0
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc    590099 Nov 25 09:46 input.tar.gz
[2025-11-25 09:51:10] -rw-r--r-- 2 boinc boinc     15120 Nov 25 09:46 start_atlas.sh
[2025-11-25 09:51:10] -rw------- 1 boinc boinc    163840 Nov 25 09:51 result.tar.gz
09:51:12 (4019290): run_atlas exited; CPU time 31.757910
09:51:12 (4019290): called boinc_finish(0)

</stderr_txt>
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