Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:23:04 (963881): wrapper (7.7.26015): starting
00:23:04 (963881): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:23:04] Arguments: --nthreads 12
[2025-11-25 00:23:04] Threads: 12
[2025-11-25 00:23:04] Checking for CVMFS
[2025-11-25 00:23:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:23:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:23:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:23:05] 2.11.5.0 2950530 26569 152692 153276 1 72 35047736 45568000 10967 130560 0 269408454 99.812 152540650 27713 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-25 00:23:05] CVMFS is ok
[2025-11-25 00:23:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:23:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:23:05] Further information can be found at the LHC@home message board.
[2025-11-25 00:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:23:05] Checking for apptainer binary...
[2025-11-25 00:23:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:23:05] Running /usr/bin/apptainer --version
[2025-11-25 00:23:05] apptainer version 1.4.1-1.el9
[2025-11-25 00:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:23:05] wns0081.triumf.lcg
[2025-11-25 00:23:05] apptainer works
[2025-11-25 00:23:05] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:23:05] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:23:05] Starting ATLAS job with PandaID=6896242963
[2025-11-25 00:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:27:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | wrong length of table data, x=[1764059028.0], y=[28520.0] (must be same and length>=4)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . Timing measurements:
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . get job = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . initial setup = 2 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload setup = 8 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-in = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload execution = 63 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-out = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . log creation = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:27:24] 2025-11-25 08:26:51,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242963/pilotlog.txt
[2025-11-25 00:27:24] 2025-11-25 08:26:51,483 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 00:27:24] - Log from pilotlog.txt -
[2025-11-25 00:27:24] 2025-11-25 08:26:51,466 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242963/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | INFO     | extracted standard info from prmon json
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | wrong length of table data, x=[1764059028.0], y=[28520.0] (must be same and length>=4)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . Timing measurements:
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . get job = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . initial setup = 2 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload setup = 8 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-in = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload execution = 63 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-out = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . log creation = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:27:24] 2025-11-25 08:26:51,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242963/pilotlog.txt
[2025-11-25 00:27:24] 2025-11-25 08:26:51,484 | WARNING  | 
[2025-11-25 00:27:24] [begin log extracts]
[2025-11-25 00:27:24] - Log from pilotlog.txt -
[2025-11-25 00:27:24] 2025-11-25 08:26:51,466 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242963/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | INFO     | extracted standard info from prmon json
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:27:24] 2025-11-25 08:26:51,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:27:24] 2025-11-25 08:26:51,468 | WARNING  | wrong length of table data, x=[1764059028.0], y=[28520.0] (must be same and length>=4)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . Timing measurements:
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . get job = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . initial setup = 2 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload setup = 8 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-in = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . payload execution = 63 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . stage-out = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | . log creation = 0 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | ..............................
[2025-11-25 00:27:24] 2025-11-25 08:26:51,470 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:27:24] 2025-11-25 08:26:51,471 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242963/pilotlog.txt
[2025-11-25 00:27:24] [end log extracts]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,484 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,485 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | 
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | job summary report
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | --------------------------------------------------
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | PanDA job id: 6896242963
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | task id: 47556173
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 00:24:40,691 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | pilot state: failed 
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | transexitcode: 65
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | exeerrorcode: 65
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 00:27:24] 2025-11-25 08:26:51,551 | INFO     | exitcode: 65
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | cpuconsumptiontime: 44 s
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | nevents: 0
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | neventsw: 0
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | pid: 974048
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | pgrp: 974048
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | corecount: 12
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | event service: False
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | sizes: {0: 2284304, 1: 2284304, 6: 2284594, 11: 2284622, 75: 2314307, 76: 2314307, 198: 2314629}
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | --------------------------------------------------
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | 
[2025-11-25 00:27:24] 2025-11-25 08:26:51,552 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 00:27:24] 2025-11-25 08:26:51,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:27:24] 2025-11-25 08:26:51,579 | INFO     | job 6896242963 has completed (purged errors)
[2025-11-25 00:27:24] 2025-11-25 08:26:51,579 | INFO     | overall cleanup function is called
[2025-11-25 00:27:24] 2025-11-25 08:26:52,589 | INFO     | --- collectZombieJob: --- 10, [974048]
[2025-11-25 00:27:24] 2025-11-25 08:26:52,589 | INFO     | zombie collector waiting for pid 974048
[2025-11-25 00:27:24] 2025-11-25 08:26:52,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:27:24] 2025-11-25 08:26:52,589 | INFO     | collected zombie processes
[2025-11-25 00:27:24] 2025-11-25 08:26:52,589 | INFO     | will attempt to kill all subprocesses of pid=974048
[2025-11-25 00:27:24] 2025-11-25 08:26:52,755 | INFO     | process IDs to be killed: [974048] (in reverse order)
[2025-11-25 00:27:24] 2025-11-25 08:26:52,822 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:27:24] 2025-11-25 08:26:52,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:27:24] 2025-11-25 08:26:52,830 | INFO     | did not find any defunct processes belonging to 974048
[2025-11-25 00:27:24] 2025-11-25 08:26:52,836 | INFO     | did not find any defunct processes belonging to 974048
[2025-11-25 00:27:24] 2025-11-25 08:26:52,838 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:27:24] 2025-11-25 08:26:52,838 | INFO     | ready for new job
[2025-11-25 00:27:24] 2025-11-25 08:26:52,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:27:24] 2025-11-25 08:26:52,840 | INFO     | ***************************************
[2025-11-25 00:27:24] 2025-11-25 08:26:52,840 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:27:24] 2025-11-25 08:26:52,840 | INFO     | ***************************************
[2025-11-25 00:27:24] 2025-11-25 08:26:52,840 | INFO     | 
[2025-11-25 00:27:24] 2025-11-25 08:26:52,842 | INFO     | architecture information:
[2025-11-25 00:27:24] 2025-11-25 08:26:52,843 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:27:24] 2025-11-25 08:26:52,853 | INFO     | cat /etc/os-release:
[2025-11-25 00:27:24] NAME="CentOS Linux"
[2025-11-25 00:27:24] VERSION="7 (Core)"
[2025-11-25 00:27:24] ID="centos"
[2025-11-25 00:27:24] ID_LIKE="rhel fedora"
[2025-11-25 00:27:24] VERSION_ID="7"
[2025-11-25 00:27:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:27:24] ANSI_COLOR="0;31"
[2025-11-25 00:27:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:27:24] HOME_URL="https://www.centos.org/"
[2025-11-25 00:27:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:27:24] 
[2025-11-25 00:27:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:27:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:27:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:27:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:27:24] 
[2025-11-25 00:27:24] 2025-11-25 08:26:52,854 | INFO     | ***************************************
[2025-11-25 00:27:24] 2025-11-25 08:26:53,371 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 00:27:24] 2025-11-25 08:26:53,400 | INFO     | sufficient remaining disk space (1863374077952 B)
[2025-11-25 00:27:24] 2025-11-25 08:26:53,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:27:24] 2025-11-25 08:26:53,401 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:27:24] 2025-11-25 08:26:53,401 | INFO     | update_server=False
[2025-11-25 00:27:24] 2025-11-25 08:26:53,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:27:24] 2025-11-25 08:26:53,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:27:24] 2025-11-25 08:26:53,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:27:24] 2025-11-25 08:26:54,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:27:24] 2025-11-25 08:26:54,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:27:24] 2025-11-25 08:26:54,303 | INFO     | aborting loop
[2025-11-25 00:27:24] 2025-11-25 08:26:54,357 | INFO     | all data control threads have been joined
[2025-11-25 00:27:24] 2025-11-25 08:26:54,407 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:54,423 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:54,687 | INFO     | all job control threads have been joined
[2025-11-25 00:27:24] 2025-11-25 08:26:54,801 | INFO     | all payload control threads have been joined
[2025-11-25 00:27:24] 2025-11-25 08:26:54,801 | INFO     | [job] validate thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:54,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:54,990 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,171 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,192 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,309 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,363 | INFO     | [data] control thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,669 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,693 | INFO     | [job] control thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,790 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,810 | INFO     | [payload] control thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:55,865 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:56,278 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:26:57,423 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:27:24] 2025-11-25 08:27:16,939 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:27:24] 2025-11-25 08:27:18,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851028690752)>', '<ExcThread(monitor, started 139850460141312)>']
[2025-11-25 00:27:24] 2025-11-25 08:27:23,624 | INFO     | PID=967521 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 00:27:24] 2025-11-25 08:27:23,624 | INFO     | .. there are 14 such processes running
[2025-11-25 00:27:24] 2025-11-25 08:27:23,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:27:24] 2025-11-25 08:27:23,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:27:24] 2025-11-25 08:27:23,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:27:24] 2025-11-25 08:27:23,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:27:24] 2025-11-25 08:27:23,625 | INFO     | [monitor] control thread has ended
[2025-11-25 00:27:24] 2025-11-25 08:27:23,949 | INFO     | all workflow threads have been joined
[2025-11-25 00:27:24] 2025-11-25 08:27:23,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:27:24] 2025-11-25 08:27:23,950 | INFO     | traces error code: 0
[2025-11-25 00:27:24] 2025-11-25 08:27:23,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:27:24] 2025-11-25 08:27:24,113 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:27:24] 2025-11-25 08:27:24,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:27:24] 2025-11-25 08:27:24,150 [wrapper] pilotpid: 967521
[2025-11-25 00:27:24] 2025-11-25 08:27:24,152 [wrapper] Pilot exit status: 0
[2025-11-25 00:27:24] 2025-11-25 08:27:24,163 [wrapper] pandaids: 6896242963
[2025-11-25 00:27:24] 2025-11-25 08:27:24,205 [wrapper] cleanup supervisor_pilot  967527 967522
[2025-11-25 00:27:24] 2025-11-25 08:27:24,208 [wrapper] Test setup, not cleaning
[2025-11-25 00:27:24] 2025-11-25 08:27:24,224 [wrapper] apfmon messages muted
[2025-11-25 00:27:24] 2025-11-25 08:27:24,239 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:27:24] 2025-11-25 08:27:24,241 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:27:24]  *** Error codes and diagnostics ***
[2025-11-25 00:27:24]     "exeErrorCode": 65,
[2025-11-25 00:27:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 00:27:24]     "pilotErrorCode": 1305,
[2025-11-25 00:27:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 00:27:24]  *** Listing of results directory ***
[2025-11-25 00:27:24] total 403732
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc    576529 Nov 24 13:08 pilot3.tar.gz
[2025-11-25 00:27:24] -rwx------. 1 boinc boinc     36292 Nov 24 13:12 runpilot2-wrapper.sh
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc      5112 Nov 24 13:12 queuedata.json
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:27:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:23 run_atlas
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:23 job.xml
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc      6594 Nov 25 00:23 init_data.xml
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc 409220304 Nov 25 00:23 EVNT.47483658._003058.pool.root.1
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:23 start_atlas.sh
[2025-11-25 00:27:24] drwxrwx--x. 2 boinc boinc      4096 Nov 25 00:23 shared
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:23 input.tar.gz
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:23 boinc_lockfile
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc      2784 Nov 25 00:23 pandaJob.out
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc    991858 Nov 25 00:23 agis_schedconf.cvmfs.json
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc   1516227 Nov 25 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:27:24] drwx------. 5 boinc boinc      4096 Nov 25 00:23 pilot3
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc       523 Nov 25 00:24 boinc_task_state.xml
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc      1001 Nov 25 00:24 memory_monitor_summary.json
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc     48777 Nov 25 00:24 log.47556173._000403.job.log.tgz.1
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc     10336 Nov 25 00:26 heartbeat.json
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc        95 Nov 25 00:27 pilot_heartbeat.json
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc      4822 Nov 25 00:27 pilotlog.txt
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc     94749 Nov 25 00:27 log.47556173._000403.job.log.1
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc      8192 Nov 25 00:27 boinc_mmap_file
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc        23 Nov 25 00:27 wrapper_checkpoint.txt
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc       186 Nov 25 00:27 output.list
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc       620 Nov 25 00:27 runtime_log
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc    163840 Nov 25 00:27 result.tar.gz
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc      8636 Nov 25 00:27 runtime_log.err
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc       647 Nov 25 00:27 Q4mNDmp2sh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKvLKDmc2N4Zn.diag
[2025-11-25 00:27:24] -rw-r--r--. 1 boinc boinc     22383 Nov 25 00:27 stderr.txt
[2025-11-25 00:27:24] No HITS result produced
[2025-11-25 00:27:24]  *** Contents of shared directory: ***
[2025-11-25 00:27:24] total 400392
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc 409220304 Nov 25 00:23 ATLAS.root_0
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:23 start_atlas.sh
[2025-11-25 00:27:24] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:23 input.tar.gz
[2025-11-25 00:27:24] -rw-------. 1 boinc boinc    163840 Nov 25 00:27 result.tar.gz
00:27:26 (963881): run_atlas exited; CPU time 42.405872
00:27:26 (963881): called boinc_finish(0)

</stderr_txt>
]]>

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