Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
21:45:48 (905822): wrapper (7.7.26015): starting
21:45:48 (905822): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 21:45:48] Arguments: --nthreads 12
[2025-11-25 21:45:48] Threads: 12
[2025-11-25 21:45:48] Checking for CVMFS
[2025-11-25 21:45:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:45:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:45:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:45:49] 2.13.0.0 557766 1872 91860 153297 2 81 4406895 6144001 0 130560 0 1166424 99.984 72957 840 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 21:45:49] CVMFS is ok
[2025-11-25 21:45:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:45:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 21:45:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 21:45:49] Further information can be found at the LHC@home message board.
[2025-11-25 21:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:45:49] Checking for apptainer binary...
[2025-11-25 21:45:49] apptainer is not installed, using version from CVMFS
[2025-11-25 21:45:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:45:49] Debian-bookworm-latest-amd64-base
[2025-11-25 21:45:49] apptainer works
[2025-11-25 21:45:49] Set ATHENA_PROC_NUMBER=12
[2025-11-25 21:45:49] Set ATHENA_CORE_NUMBER=12
[2025-11-25 21:45:49] Starting ATLAS job with PandaID=6895559280
[2025-11-25 21:45:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:07:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:07:18] 2025-11-26 00:06:10,805 | INFO     | monitor loop #916: job 0:6895559280 is in state 'finished'
[2025-11-26 01:07:18] 2025-11-26 00:06:10,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 01:07:18] 2025-11-26 00:06:11,902 | INFO     | time since job start (12017s) is within the limit (172800.0s)
[2025-11-26 01:07:18] 2025-11-26 00:06:12,943 | INFO     | PID=909688 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 01:07:18] 2025-11-26 00:06:12,994 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 01:07:18] 2025-11-26 00:06:12,995 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3631.4083750000004
[2025-11-26 01:07:18] 2025-11-26 00:06:12,997 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895559280/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 01:07:18] 2025-11-26 00:06:12,997 | INFO     | extracted standard info from prmon json
[2025-11-26 01:07:18] 2025-11-26 00:06:12,997 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:07:18] 2025-11-26 00:06:12,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | sum of square deviations: 2370653252.873102
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | sum of deviations: 115984576507.84262
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | mean x: 1764109552.0253806
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | mean y: 3580766.431472081
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | intersect: -86305751506.06691
[2025-11-26 01:07:18] 2025-11-26 00:06:12,999 | INFO     | chi2: 3.375454700868341
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | sum of square deviations: 2194688687.869779
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | sum of deviations: 158281989294.86972
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | mean x: 1764109399.5260417
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | mean y: 3616974.5260416665
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | intersect: -127224789784.96957
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | chi2: 1.849050878450306
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | current chi2=1.849050878450306 (change=45.2206875128665 %)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,000 | INFO     | sum of square deviations: 2027654522.8663137
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | sum of deviations: 149142035597.26733
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | mean x: 1764109247.026738
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | mean y: 3608629.946524064
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | intersect: -129753626219.70888
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | chi2: 1.8498561881150182
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | current chi2=1.8498561881150182 (change=-0.043552596312936155 %)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | right removable region: 186
[2025-11-26 01:07:18] 2025-11-26 00:06:13,001 | INFO     | sum of square deviations: 2194685637.869779
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | sum of deviations: 59744112272.52601
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | mean x: 1764109704.5260417
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | mean y: 3629090.9947916665
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | intersect: -48019270603.44888
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | chi2: 1.5843680985254323
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | current chi2=1.5843680985254323 (change=53.062083809987115 %)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,002 | INFO     | sum of square deviations: 2027648422.8663137
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | sum of deviations: 49965143977.3743
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | mean x: 1764109857.026738
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | mean y: 3637998.92513369
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | intersect: -43467410534.05698
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | chi2: 1.5771417350778818
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | current chi2=1.5771417350778818 (change=0.45610382172400554 %)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | left removable region: 20
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | sum of square deviations: 1418370327.3493905
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | sum of deviations: 70726084023.68674
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | mean x: 1764109826.5301204
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | mean y: 3683481.1626506024
[2025-11-26 01:07:18] 2025-11-26 00:06:13,003 | INFO     | intersect: -87962468526.08122
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | chi2: 0.01324604956635988
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | current memory leak: 49.86 B/s (using 166 data points, chi2=0.01)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | could have reported an average CPU frequency of 3922 MHz (10 samples)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | ..............................
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . Timing measurements:
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . get job = 0 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . initial setup = 1 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . payload setup = 3 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . stage-in = 0 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . payload execution = 11987 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . stage-out = 1 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | . log creation = 0 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,004 | INFO     | ..............................
[2025-11-26 01:07:18] 2025-11-26 00:06:13,056 | INFO     | 
[2025-11-26 01:07:18] 2025-11-26 00:06:13,056 | INFO     | job summary report
[2025-11-26 01:07:18] 2025-11-26 00:06:13,056 | INFO     | --------------------------------------------------
[2025-11-26 01:07:18] 2025-11-26 00:06:13,056 | INFO     | PanDA job id: 6895559280
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | task id: 47556149
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | errors: (none)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | pilot state: finished 
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | transexitcode: 0
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | exeerrorcode: 0
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | exeerrordiag: 
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | exitcode: 0
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | exitmsg: OK
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | cpuconsumptiontime: 138823 s
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | nevents: 1000
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | neventsw: 0
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | pid: 916450
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | pgrp: 916450
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | corecount: 12
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | event service: False
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | sizes: {0: 2284151, 1: 2284350, 3: 2284612, 11: 2284640, 11994: 2315506, 11995: 2315505, 11997: 2324697, 12001: 2324753, 12006: 2324999}
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | --------------------------------------------------
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | 
[2025-11-26 01:07:18] 2025-11-26 00:06:13,057 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 01:07:18] 2025-11-26 00:06:13,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:07:18] 2025-11-26 00:06:13,069 | INFO     | job 6895559280 has completed (purged errors)
[2025-11-26 01:07:18] 2025-11-26 00:06:13,069 | INFO     | overall cleanup function is called
[2025-11-26 01:07:18] 2025-11-26 00:06:14,087 | INFO     | --- collectZombieJob: --- 10, [916450]
[2025-11-26 01:07:18] 2025-11-26 00:06:14,088 | INFO     | zombie collector waiting for pid 916450
[2025-11-26 01:07:18] 2025-11-26 00:06:14,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:07:18] 2025-11-26 00:06:14,088 | INFO     | collected zombie processes
[2025-11-26 01:07:18] 2025-11-26 00:06:14,088 | INFO     | will attempt to kill all subprocesses of pid=916450
[2025-11-26 01:07:18] 2025-11-26 00:06:14,153 | INFO     | process IDs to be killed: [916450] (in reverse order)
[2025-11-26 01:07:18] 2025-11-26 00:06:14,178 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:07:18] 2025-11-26 00:06:14,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:07:18] 2025-11-26 00:06:14,179 | INFO     | did not find any defunct processes belonging to 916450
[2025-11-26 01:07:18] 2025-11-26 00:06:14,181 | INFO     | did not find any defunct processes belonging to 916450
[2025-11-26 01:07:18] 2025-11-26 00:06:14,183 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:07:18] 2025-11-26 00:06:14,183 | INFO     | ready for new job
[2025-11-26 01:07:18] 2025-11-26 00:06:14,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:07:18] 2025-11-26 00:06:14,184 | INFO     | ***************************************
[2025-11-26 01:07:18] 2025-11-26 00:06:14,184 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:07:18] 2025-11-26 00:06:14,184 | INFO     | ***************************************
[2025-11-26 01:07:18] 2025-11-26 00:06:14,184 | INFO     | 
[2025-11-26 01:07:18] 2025-11-26 00:06:14,186 | INFO     | architecture information:
[2025-11-26 01:07:18] 2025-11-26 00:06:14,186 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:07:18] 2025-11-26 00:06:14,197 | INFO     | cat /etc/os-release:
[2025-11-26 01:07:18] NAME="CentOS Linux"
[2025-11-26 01:07:18] VERSION="7 (Core)"
[2025-11-26 01:07:18] ID="centos"
[2025-11-26 01:07:18] ID_LIKE="rhel fedora"
[2025-11-26 01:07:18] VERSION_ID="7"
[2025-11-26 01:07:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:07:18] ANSI_COLOR="0;31"
[2025-11-26 01:07:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:07:18] HOME_URL="https://www.centos.org/"
[2025-11-26 01:07:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:07:18] 
[2025-11-26 01:07:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:07:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:07:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:07:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:07:18] 
[2025-11-26 01:07:18] 2025-11-26 00:06:14,197 | INFO     | ***************************************
[2025-11-26 01:07:18] 2025-11-26 00:06:14,700 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 01:07:18] 2025-11-26 00:06:14,715 | INFO     | sufficient remaining disk space (756575895552 B)
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | INFO     | update_server=False
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:07:18] 2025-11-26 00:06:14,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:07:18] 2025-11-26 00:06:14,717 | INFO     | aborting loop
[2025-11-26 01:07:18] 2025-11-26 00:06:15,099 | INFO     | all data control threads have been joined
[2025-11-26 01:07:18] 2025-11-26 00:06:15,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:07:18] 2025-11-26 00:06:15,367 | INFO     | all job control threads have been joined
[2025-11-26 01:07:18] 2025-11-26 00:06:15,721 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:15,722 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:15,722 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:15,778 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:15,920 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,104 | INFO     | [data] control thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,129 | INFO     | all payload control threads have been joined
[2025-11-26 01:07:18] 2025-11-26 00:06:16,308 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,373 | INFO     | [job] control thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,442 | INFO     | [job] validate thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,542 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:16,915 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:17,015 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:17,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:17,113 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:17,134 | INFO     | [payload] control thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:18,722 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:07:18] 2025-11-26 00:06:45,103 | INFO     | PID=909688 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 01:07:18] 2025-11-26 00:06:45,103 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:07:18] 2025-11-26 00:06:45,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:07:18] 2025-11-26 00:06:45,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:07:18] 2025-11-26 00:07:12,678 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:07:18] 2025-11-26 00:07:13,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492667725632)>', '<ExcThread(monitor, started 140492004128512)>']
[2025-11-26 01:07:18] 2025-11-26 00:07:14,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:07:18] 2025-11-26 00:07:14,251 | INFO     | [monitor] control thread has ended
[2025-11-26 01:07:18] 2025-11-26 00:07:18,620 | INFO     | all workflow threads have been joined
[2025-11-26 01:07:18] 2025-11-26 00:07:18,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:07:18] 2025-11-26 00:07:18,620 | INFO     | traces error code: 0
[2025-11-26 01:07:18] 2025-11-26 00:07:18,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:07:18] 2025-11-26 00:07:18,688 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:07:18] 2025-11-26 00:07:18,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:07:18] 2025-11-26 00:07:18,692 [wrapper] pilotpid: 909688
[2025-11-26 01:07:18] 2025-11-26 00:07:18,693 [wrapper] Pilot exit status: 0
[2025-11-26 01:07:18] 2025-11-26 00:07:18,700 [wrapper] pandaids: 6895559280
[2025-11-26 01:07:18] 2025-11-26 00:07:18,713 [wrapper] cleanup supervisor_pilot  942591 909689
[2025-11-26 01:07:18] 2025-11-26 00:07:18,715 [wrapper] Test setup, not cleaning
[2025-11-26 01:07:18] 2025-11-26 00:07:18,716 [wrapper] apfmon messages muted
[2025-11-26 01:07:18] 2025-11-26 00:07:18,717 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:07:18] 2025-11-26 00:07:18,719 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:07:18]  *** Error codes and diagnostics ***
[2025-11-26 01:07:18]     "exeErrorCode": 0,
[2025-11-26 01:07:18]     "exeErrorDiag": "",
[2025-11-26 01:07:18]     "pilotErrorCode": 0,
[2025-11-26 01:07:18]     "pilotErrorDiag": "",
[2025-11-26 01:07:18]  *** Listing of results directory ***
[2025-11-26 01:07:18] total 1301800
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc    576529 Nov 24 10:01 pilot3.tar.gz
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc      5112 Nov 24 10:50 queuedata.json
[2025-11-26 01:07:18] -rwx------ 1 boinc boinc     36292 Nov 24 10:54 runpilot2-wrapper.sh
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc       100 Nov 25 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:07:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 21:45 run_atlas
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc       105 Nov 25 21:45 job.xml
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:45 start_atlas.sh
[2025-11-26 01:07:18] drwxrwx--x 2 boinc boinc      4096 Nov 25 21:45 shared
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc    590105 Nov 25 21:45 input.tar.gz
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc      6729 Nov 25 21:45 init_data.xml
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc 408426571 Nov 25 21:45 EVNT.47483658._001301.pool.root.1
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc         0 Nov 25 21:45 boinc_lockfile
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc      2786 Nov 25 21:45 pandaJob.out
[2025-11-26 01:07:18] -rw------- 1 boinc boinc    991893 Nov 25 21:45 agis_schedconf.cvmfs.json
[2025-11-26 01:07:18] drwx------ 5 boinc boinc      4096 Nov 25 21:45 pilot3
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc       532 Nov 26 01:02 boinc_task_state.xml
[2025-11-26 01:07:18] -rw------- 1 boinc boinc 913385642 Nov 26 01:05 HITS.47556149._002873.pool.root.1
[2025-11-26 01:07:18] -rw------- 1 boinc boinc      1026 Nov 26 01:05 memory_monitor_summary.json
[2025-11-26 01:07:18] -rw------- 1 boinc boinc   1516240 Nov 26 01:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:07:18] -rw------- 1 boinc boinc   1927647 Nov 26 01:06 log.47556149._002873.job.log.tgz.1
[2025-11-26 01:07:18] -rw------- 1 boinc boinc        95 Nov 26 01:06 pilot_heartbeat.json
[2025-11-26 01:07:18] -rw------- 1 boinc boinc      8612 Nov 26 01:06 heartbeat.json
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc      8192 Nov 26 01:07 boinc_mmap_file
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc        29 Nov 26 01:07 wrapper_checkpoint.txt
[2025-11-26 01:07:18] -rw------- 1 boinc boinc      4755 Nov 26 01:07 pilotlog.txt
[2025-11-26 01:07:18] -rw------- 1 boinc boinc   1725104 Nov 26 01:07 log.47556149._002873.job.log.1
[2025-11-26 01:07:18] -rw------- 1 boinc boinc       353 Nov 26 01:07 output.list
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc       620 Nov 26 01:07 runtime_log
[2025-11-26 01:07:18] -rw------- 1 boinc boinc   3676160 Nov 26 01:07 result.tar.gz
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc      9133 Nov 26 01:07 runtime_log.err
[2025-11-26 01:07:18] -rw------- 1 boinc boinc       713 Nov 26 01:07 qRqLDmESih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmb0IKDmAw8knn.diag
[2025-11-26 01:07:18] -rw-r--r-- 1 boinc boinc     21592 Nov 26 01:07 stderr.txt
[2025-11-26 01:07:18] HITS file was successfully produced:
[2025-11-26 01:07:18] -rw------- 1 boinc boinc 913385642 Nov 26 01:05 shared/HITS.pool.root.1
[2025-11-26 01:07:18]  *** Contents of shared directory: ***
[2025-11-26 01:07:18] total 1295032
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:45 start_atlas.sh
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc    590105 Nov 25 21:45 input.tar.gz
[2025-11-26 01:07:18] -rw-r--r-- 2 boinc boinc 408426571 Nov 25 21:45 ATLAS.root_0
[2025-11-26 01:07:18] -rw------- 1 boinc boinc 913385642 Nov 26 01:05 HITS.pool.root.1
[2025-11-26 01:07:18] -rw------- 1 boinc boinc   3676160 Nov 26 01:07 result.tar.gz
01:07:20 (905822): run_atlas exited; CPU time 138666.140046
01:07:20 (905822): called boinc_finish(0)

</stderr_txt>
]]>

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