Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:23:58 (9982): wrapper (7.7.26015): starting
03:23:58 (9982): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:23:58] Arguments: --nthreads 8
[2025-11-25 03:23:58] Threads: 8
[2025-11-25 03:23:58] Checking for CVMFS
[2025-11-25 03:23:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:23:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:23:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:23:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:23:58] 2.11.2.0 2827 41394 81660 153276 2 80 16987832 20275201 1 130560 0 5062056 99.526 2859223 29915 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:23:58] CVMFS is ok
[2025-11-25 03:23:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:23:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:23:58] Further information can be found at the LHC@home message board.
[2025-11-25 03:23:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:23:58] Checking for apptainer binary...
[2025-11-25 03:23:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:23:58] Running /usr/bin/apptainer --version
[2025-11-25 03:23:58] apptainer version 1.3.2-1.el7
[2025-11-25 03:23:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:24:00] c-204-30.aglt2.org
[2025-11-25 03:24:00] apptainer works
[2025-11-25 03:24:00] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:24:00] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:24:00] Starting ATLAS job with PandaID=6895369000
[2025-11-25 03:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:46:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:46:38] 2025-11-25 20:46:04,574 | INFO     | time since job start (44506s) is within the limit (172800.0s)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,808 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 15:46:38] 2025-11-25 20:46:04,812 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-25 15:46:38] 2025-11-25 20:46:04,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895369000/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,815 | INFO     | extracted standard info from prmon json
[2025-11-25 15:46:38] 2025-11-25 20:46:04,815 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:46:38] 2025-11-25 20:46:04,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:46:38] 2025-11-25 20:46:04,827 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:46:38] 2025-11-25 20:46:04,828 | INFO     | sum of square deviations: 120132972800.39763
[2025-11-25 15:46:38] 2025-11-25 20:46:04,839 | INFO     | sum of deviations: 781075610889.7273
[2025-11-25 15:46:38] 2025-11-25 20:46:04,839 | INFO     | mean x: 1764081294.6474624
[2025-11-25 15:46:38] 2025-11-25 20:46:04,839 | INFO     | mean y: 3138563.5281207133
[2025-11-25 15:46:38] 2025-11-25 20:46:04,839 | INFO     | intersect: -11466492485.769836
[2025-11-25 15:46:38] 2025-11-25 20:46:04,840 | INFO     | chi2: 5.778708676103278
[2025-11-25 15:46:38] 2025-11-25 20:46:04,841 | INFO     | sum of square deviations: 117678168403.28775
[2025-11-25 15:46:38] 2025-11-25 20:46:04,852 | INFO     | sum of deviations: 1026218972923.8667
[2025-11-25 15:46:38] 2025-11-25 20:46:04,852 | INFO     | mean x: 1764081142.1519337
[2025-11-25 15:46:38] 2025-11-25 20:46:04,852 | INFO     | mean y: 3153785.2375690606
[2025-11-25 15:46:38] 2025-11-25 20:46:04,852 | INFO     | intersect: -15380613335.01055
[2025-11-25 15:46:38] 2025-11-25 20:46:04,853 | INFO     | chi2: 3.0198244852186673
[2025-11-25 15:46:38] 2025-11-25 20:46:04,853 | INFO     | current chi2=3.0198244852186673 (change=47.74222660321047 %)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,854 | INFO     | sum of square deviations: 115257039056.14731
[2025-11-25 15:46:38] 2025-11-25 20:46:04,865 | INFO     | sum of deviations: 1109891333691.931
[2025-11-25 15:46:38] 2025-11-25 20:46:04,865 | INFO     | mean x: 1764080989.6564672
[2025-11-25 15:46:38] 2025-11-25 20:46:04,865 | INFO     | mean y: 3159050.445062587
[2025-11-25 15:46:38] 2025-11-25 20:46:04,865 | INFO     | intersect: -16984421216.965685
[2025-11-25 15:46:38] 2025-11-25 20:46:04,866 | INFO     | chi2: 2.600939493049004
[2025-11-25 15:46:38] 2025-11-25 20:46:04,866 | INFO     | current chi2=2.600939493049004 (change=13.871170136542933 %)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,866 | INFO     | right removable region: 718
[2025-11-25 15:46:38] 2025-11-25 20:46:04,867 | INFO     | sum of square deviations: 117677880483.2878
[2025-11-25 15:46:38] 2025-11-25 20:46:04,878 | INFO     | sum of deviations: 555016122436.8258
[2025-11-25 15:46:38] 2025-11-25 20:46:04,878 | INFO     | mean x: 1764081447.1519337
[2025-11-25 15:46:38] 2025-11-25 20:46:04,878 | INFO     | mean y: 3152581.874309392
[2025-11-25 15:46:38] 2025-11-25 20:46:04,879 | INFO     | intersect: -8316963657.813215
[2025-11-25 15:46:38] 2025-11-25 20:46:04,879 | INFO     | chi2: 3.322225466437247
[2025-11-25 15:46:38] 2025-11-25 20:46:04,879 | INFO     | current chi2=3.322225466437247 (change=42.5092065953132 %)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,880 | INFO     | sum of square deviations: 115256507380.45905
[2025-11-25 15:46:38] 2025-11-25 20:46:04,891 | INFO     | sum of deviations: 510741304765.77014
[2025-11-25 15:46:38] 2025-11-25 20:46:04,891 | INFO     | mean x: 1764081599.6550765
[2025-11-25 15:46:38] 2025-11-25 20:46:04,891 | INFO     | mean y: 3155369.1724617523
[2025-11-25 15:46:38] 2025-11-25 20:46:04,891 | INFO     | intersect: -7814098149.945343
[2025-11-25 15:46:38] 2025-11-25 20:46:04,892 | INFO     | chi2: 3.2808602248696803
[2025-11-25 15:46:38] 2025-11-25 20:46:04,892 | INFO     | current chi2=3.2808602248696803 (change=1.2451063898419508 %)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,892 | INFO     | left removable region: 20
[2025-11-25 15:46:38] 2025-11-25 20:46:04,893 | INFO     | sum of square deviations: 105449886567.3882
[2025-11-25 15:46:38] 2025-11-25 20:46:04,903 | INFO     | sum of deviations: 784620236347.2308
[2025-11-25 15:46:38] 2025-11-25 20:46:04,903 | INFO     | mean x: 1764081569.1676219
[2025-11-25 15:46:38] 2025-11-25 20:46:04,903 | INFO     | mean y: 3180217.9040114614
[2025-11-25 15:46:38] 2025-11-25 20:46:04,904 | INFO     | intersect: -13122809224.02447
[2025-11-25 15:46:38] 2025-11-25 20:46:04,904 | INFO     | chi2: 0.059772557683500725
[2025-11-25 15:46:38] 2025-11-25 20:46:04,905 | INFO     | current memory leak: 7.44 B/s (using 698 data points, chi2=0.06)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,905 | INFO     | could have reported an average CPU frequency of 2170 MHz (28 samples)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,905 | INFO     | ..............................
[2025-11-25 15:46:38] 2025-11-25 20:46:04,905 | INFO     | . Timing measurements:
[2025-11-25 15:46:38] 2025-11-25 20:46:04,905 | INFO     | . get job = 0 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . initial setup = 2 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . payload setup = 9 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . stage-in = 0 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . payload execution = 44462 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . stage-out = 3 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | . log creation = 0 s
[2025-11-25 15:46:38] 2025-11-25 20:46:04,906 | INFO     | ..............................
[2025-11-25 15:46:38] 2025-11-25 20:46:04,997 | INFO     | 
[2025-11-25 15:46:38] 2025-11-25 20:46:04,997 | INFO     | job summary report
[2025-11-25 15:46:38] 2025-11-25 20:46:04,997 | INFO     | --------------------------------------------------
[2025-11-25 15:46:38] 2025-11-25 20:46:04,998 | INFO     | PanDA job id: 6895369000
[2025-11-25 15:46:38] 2025-11-25 20:46:04,998 | INFO     | task id: 47556137
[2025-11-25 15:46:38] 2025-11-25 20:46:04,998 | INFO     | errors: (none)
[2025-11-25 15:46:38] 2025-11-25 20:46:04,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:46:38] 2025-11-25 20:46:04,998 | INFO     | pilot state: finished 
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | transexitcode: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | exeerrorcode: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | exeerrordiag: 
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | exitcode: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | exitmsg: OK
[2025-11-25 15:46:38] 2025-11-25 20:46:04,999 | INFO     | cpuconsumptiontime: 345196 s
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | nevents: 1000
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | neventsw: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | pid: 20107
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | pgrp: 20107
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | corecount: 8
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | event service: False
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | sizes: {0: 2284083, 1: 2284338, 7: 2284600, 12: 2284628, 44475: 2330358, 44481: 2339357, 44482: 2339569, 44490: 2339815}
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | --------------------------------------------------
[2025-11-25 15:46:38] 2025-11-25 20:46:05,000 | INFO     | 
[2025-11-25 15:46:38] 2025-11-25 20:46:05,001 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 15:46:38] 2025-11-25 20:46:05,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,031 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:46:38] 2025-11-25 20:46:05,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:46:38] 2025-11-25 20:46:05,032 | INFO     | job 6895369000 has completed (purged errors)
[2025-11-25 15:46:38] 2025-11-25 20:46:05,032 | INFO     | overall cleanup function is called
[2025-11-25 15:46:38] 2025-11-25 20:46:06,048 | INFO     | --- collectZombieJob: --- 10, [20107]
[2025-11-25 15:46:38] 2025-11-25 20:46:06,055 | INFO     | zombie collector waiting for pid 20107
[2025-11-25 15:46:38] 2025-11-25 20:46:06,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:46:38] 2025-11-25 20:46:06,055 | INFO     | collected zombie processes
[2025-11-25 15:46:38] 2025-11-25 20:46:06,055 | INFO     | will attempt to kill all subprocesses of pid=20107
[2025-11-25 15:46:38] 2025-11-25 20:46:06,145 | INFO     | process IDs to be killed: [20107] (in reverse order)
[2025-11-25 15:46:38] 2025-11-25 20:46:06,199 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:46:38] 2025-11-25 20:46:06,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:46:38] 2025-11-25 20:46:06,204 | INFO     | did not find any defunct processes belonging to 20107
[2025-11-25 15:46:38] 2025-11-25 20:46:06,207 | INFO     | did not find any defunct processes belonging to 20107
[2025-11-25 15:46:38] 2025-11-25 20:46:06,210 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:46:38] 2025-11-25 20:46:06,210 | INFO     | ready for new job
[2025-11-25 15:46:38] 2025-11-25 20:46:06,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:46:38] 2025-11-25 20:46:06,215 | INFO     | ***************************************
[2025-11-25 15:46:38] 2025-11-25 20:46:06,215 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:46:38] 2025-11-25 20:46:06,215 | INFO     | ***************************************
[2025-11-25 15:46:38] 2025-11-25 20:46:06,215 | INFO     | 
[2025-11-25 15:46:38] 2025-11-25 20:46:06,216 | INFO     | architecture information:
[2025-11-25 15:46:38] 2025-11-25 20:46:06,216 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:46:38] 2025-11-25 20:46:06,233 | INFO     | cat /etc/os-release:
[2025-11-25 15:46:38] NAME="CentOS Linux"
[2025-11-25 15:46:38] VERSION="7 (Core)"
[2025-11-25 15:46:38] ID="centos"
[2025-11-25 15:46:38] ID_LIKE="rhel fedora"
[2025-11-25 15:46:38] VERSION_ID="7"
[2025-11-25 15:46:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:46:38] ANSI_COLOR="0;31"
[2025-11-25 15:46:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:46:38] HOME_URL="https://www.centos.org/"
[2025-11-25 15:46:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:46:38] 
[2025-11-25 15:46:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:46:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:46:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:46:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:46:38] 
[2025-11-25 15:46:38] 2025-11-25 20:46:06,234 | INFO     | ***************************************
[2025-11-25 15:46:38] 2025-11-25 20:46:06,737 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 15:46:38] 2025-11-25 20:46:06,756 | INFO     | sufficient remaining disk space (17424187392 B)
[2025-11-25 15:46:38] 2025-11-25 20:46:06,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:46:38] 2025-11-25 20:46:06,757 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:46:38] 2025-11-25 20:46:06,758 | INFO     | update_server=False
[2025-11-25 15:46:38] 2025-11-25 20:46:06,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:46:38] 2025-11-25 20:46:06,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:38] 2025-11-25 20:46:06,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:46:38] 2025-11-25 20:46:06,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:38] 2025-11-25 20:46:06,761 | INFO     | aborting loop
[2025-11-25 15:46:38] 2025-11-25 20:46:06,980 | INFO     | all payload control threads have been joined
[2025-11-25 15:46:38] 2025-11-25 20:46:07,076 | INFO     | all data control threads have been joined
[2025-11-25 15:46:38] 2025-11-25 20:46:07,380 | INFO     | all job control threads have been joined
[2025-11-25 15:46:38] 2025-11-25 20:46:07,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:46:38] 2025-11-25 20:46:07,763 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,764 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,765 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,834 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,847 | INFO     | [job] validate thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,985 | INFO     | [payload] control thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:07,993 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,003 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,081 | INFO     | [data] control thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,219 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,385 | INFO     | [job] control thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,764 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:08,928 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:09,073 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:11,756 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:17,381 | INFO     | job.realtimelogging is not enabled
[2025-11-25 15:46:38] 2025-11-25 20:46:18,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:46:38] 2025-11-25 20:46:31,638 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:46:38] 2025-11-25 20:46:32,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654933231424)>', '<ExcThread(monitor, started 139654149961472)>']
[2025-11-25 15:46:38] 2025-11-25 20:46:36,662 | INFO     | 44511s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 15:46:38] 2025-11-25 20:46:37,079 | INFO     | all workflow threads have been joined
[2025-11-25 15:46:38] 2025-11-25 20:46:37,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:46:38] 2025-11-25 20:46:37,080 | INFO     | traces error code: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:37,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | INFO     | PID=13740 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:46:38] 2025-11-25 20:46:37,779 | CRITICAL | thread 'MainThread' is not alive
[2025-11-25 15:46:38] 2025-11-25 20:46:37,780 | INFO     | [monitor] control thread has ended
[2025-11-25 15:46:38] 2025-11-25 20:46:37,897 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:46:38] 2025-11-25 20:46:37,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:46:38] 2025-11-25 20:46:37,906 [wrapper] pilotpid: 13740
[2025-11-25 15:46:38] 2025-11-25 20:46:37,911 [wrapper] Pilot exit status: 0
[2025-11-25 15:46:38] 2025-11-25 20:46:37,928 [wrapper] pandaids: 6895369000
[2025-11-25 15:46:38] 2025-11-25 20:46:37,976 [wrapper] cleanup supervisor_pilot 18003 13741
[2025-11-25 15:46:38] 2025-11-25 20:46:37,981 [wrapper] Test setup, not cleaning
[2025-11-25 15:46:38] 2025-11-25 20:46:37,986 [wrapper] apfmon messages muted
[2025-11-25 15:46:38] 2025-11-25 20:46:37,990 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:46:38] 2025-11-25 20:46:37,994 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:46:38]  *** Error codes and diagnostics ***
[2025-11-25 15:46:38]     "exeErrorCode": 0,
[2025-11-25 15:46:38]     "exeErrorDiag": "",
[2025-11-25 15:46:38]     "pilotErrorCode": 0,
[2025-11-25 15:46:38]     "pilotErrorDiag": "",
[2025-11-25 15:46:38]  *** Listing of results directory ***
[2025-11-25 15:46:38] total 1322560
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 14:32 pilot3.tar.gz
[2025-11-25 15:46:38] -rwx------ 1 boincer umatlas     36292 Nov 23 14:48 runpilot2-wrapper.sh
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 14:48 queuedata.json
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas       100 Nov 25 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:46:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 03:23 run_atlas
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas       105 Nov 25 03:23 job.xml
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas 412453032 Nov 25 03:23 EVNT.47483658._000876.pool.root.1
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:23 start_atlas.sh
[2025-11-25 15:46:38] drwxrwx--x 2 boincer umatlas      4096 Nov 25 03:23 shared
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 03:23 input.tar.gz
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas         0 Nov 25 03:23 boinc_lockfile
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 03:24 pandaJob.out
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas        57 Nov 25 03:24 setup.sh.local
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas    991858 Nov 25 03:24 agis_schedconf.cvmfs.json
[2025-11-25 15:46:38] drwx------ 5 boincer umatlas      4096 Nov 25 03:24 pilot3
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:34 boinc_task_state.xml
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 15:40 init_data.xml
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas 921732732 Nov 25 15:45 HITS.47556137._008627.pool.root.1
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas        95 Nov 25 15:45 pilot_heartbeat.json
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas      1061 Nov 25 15:45 memory_monitor_summary.json
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas   1516240 Nov 25 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas   1974433 Nov 25 15:45 log.47556137._008627.job.log.tgz.1
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas      8669 Nov 25 15:46 heartbeat.json
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas        29 Nov 25 15:46 wrapper_checkpoint.txt
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 15:46 boinc_mmap_file
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas       815 Nov 25 15:46 pilotlog.txt
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas   6121219 Nov 25 15:46 log.47556137._008627.job.log.1
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas       353 Nov 25 15:46 output.list
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas       620 Nov 25 15:46 runtime_log
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas   8120320 Nov 25 15:46 result.tar.gz
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 15:46 runtime_log.err
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas       668 Nov 25 15:46 JLLLDmrFVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm79KKDmQCEaon.diag
[2025-11-25 15:46:38] -rw-r--r-- 1 boincer umatlas     21260 Nov 25 15:46 stderr.txt
[2025-11-25 15:46:38] HITS file was successfully produced:
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas 921732732 Nov 25 15:45 shared/HITS.pool.root.1
[2025-11-25 15:46:38]  *** Contents of shared directory: ***
[2025-11-25 15:46:38] total 1311452
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas 412453032 Nov 25 03:23 ATLAS.root_0
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:23 start_atlas.sh
[2025-11-25 15:46:38] -rw-r--r-- 2 boincer umatlas    590103 Nov 25 03:23 input.tar.gz
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas 921732732 Nov 25 15:45 HITS.pool.root.1
[2025-11-25 15:46:38] -rw------- 1 boincer umatlas   8120320 Nov 25 15:46 result.tar.gz
15:46:40 (9982): run_atlas exited; CPU time 343085.885148
15:46:40 (9982): called boinc_finish(0)

</stderr_txt>
]]>

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