Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:29:09 (31066): wrapper (7.7.26015): starting
06:29:09 (31066): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 06:29:09] Arguments: --nthreads 4
[2025-11-25 06:29:09] Threads: 4
[2025-11-25 06:29:09] Checking for CVMFS
[2025-11-25 06:29:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 06:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 06:29:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 06:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 06:29:10] 2.11.2.0 2311 105944 74760 153281 1 82 14551142 20275200 1 130560 0 40399397 99.940 4640813 40798 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 06:29:10] CVMFS is ok
[2025-11-25 06:29:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 06:29:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 06:29:10] Further information can be found at the LHC@home message board.
[2025-11-25 06:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 06:29:10] Checking for apptainer binary...
[2025-11-25 06:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 06:29:10] Running /usr/bin/apptainer --version
[2025-11-25 06:29:10] apptainer version 1.3.2-1.el7
[2025-11-25 06:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 06:29:10] c-205-34.aglt2.org
[2025-11-25 06:29:10] apptainer works
[2025-11-25 06:29:10] Set ATHENA_PROC_NUMBER=4
[2025-11-25 06:29:10] Set ATHENA_CORE_NUMBER=4
[2025-11-25 06:29:10] Starting ATLAS job with PandaID=6895357740
[2025-11-25 06:29:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:46:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:46:20] 2025-11-25 20:45:40,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,629 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 15:46:20] 2025-11-25 20:45:40,630 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3301.61975
[2025-11-25 15:46:20] 2025-11-25 20:45:40,631 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895357740/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,631 | INFO     | extracted standard info from prmon json
[2025-11-25 15:46:20] 2025-11-25 20:45:40,631 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:46:20] 2025-11-25 20:45:40,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:46:20] 2025-11-25 20:45:40,636 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:46:20] 2025-11-25 20:45:40,636 | INFO     | sum of square deviations: 50750339458.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,639 | INFO     | sum of deviations: 110192180040.99998
[2025-11-25 15:46:20] 2025-11-25 20:45:40,639 | INFO     | mean x: 1764086833.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,640 | INFO     | mean y: 2277794.155393053
[2025-11-25 15:46:20] 2025-11-25 20:45:40,640 | INFO     | intersect: -3828013312.976328
[2025-11-25 15:46:20] 2025-11-25 20:45:40,640 | INFO     | chi2: 2.4525903542389997
[2025-11-25 15:46:20] 2025-11-25 20:45:40,640 | INFO     | sum of square deviations: 49371327555.5
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | sum of deviations: 179292685899.00006
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | mean x: 1764086680.5
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | mean y: 2285407.811808118
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | intersect: -6404020737.185937
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | chi2: 1.2707981937642046
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | current chi2=1.2707981937642046 (change=48.18546882206453 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,644 | INFO     | sum of square deviations: 48017525428.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | sum of deviations: 175325614094.99997
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | mean x: 1764086528.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | mean y: 2284960.901303538
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | intersect: -6438895651.416617
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | chi2: 1.2708966594903635
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | current chi2=1.2708966594903635 (change=-0.007748336961924659 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,648 | INFO     | right removable region: 536
[2025-11-25 15:46:20] 2025-11-25 20:45:40,649 | INFO     | sum of square deviations: 49371327555.5
[2025-11-25 15:46:20] 2025-11-25 20:45:40,652 | INFO     | sum of deviations: 47676544364.49997
[2025-11-25 15:46:20] 2025-11-25 20:45:40,652 | INFO     | mean x: 1764086985.5
[2025-11-25 15:46:20] 2025-11-25 20:45:40,652 | INFO     | mean y: 2284673.28597786
[2025-11-25 15:46:20] 2025-11-25 20:45:40,652 | INFO     | intersect: -1701246011.2491262
[2025-11-25 15:46:20] 2025-11-25 20:45:40,652 | INFO     | chi2: 1.2671190613593701
[2025-11-25 15:46:20] 2025-11-25 20:45:40,653 | INFO     | current chi2=1.2671190613593701 (change=48.33547888789046 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,653 | INFO     | sum of square deviations: 48017525428.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,656 | INFO     | sum of deviations: 42039670912.999985
[2025-11-25 15:46:20] 2025-11-25 20:45:40,656 | INFO     | mean x: 1764087138.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,656 | INFO     | mean y: 2285307.2625698326
[2025-11-25 15:46:20] 2025-11-25 20:45:40,656 | INFO     | intersect: -1542185010.2380238
[2025-11-25 15:46:20] 2025-11-25 20:45:40,657 | INFO     | chi2: 1.2648065160717774
[2025-11-25 15:46:20] 2025-11-25 20:45:40,657 | INFO     | current chi2=1.2648065160717774 (change=0.18250418276494232 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,657 | INFO     | left removable region: 20
[2025-11-25 15:46:20] 2025-11-25 20:45:40,657 | INFO     | sum of square deviations: 42601598765.0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | sum of deviations: 101379276594.00002
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | mean x: 1764087107.5
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | mean y: 2293297.069767442
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | intersect: -4195715228.236617
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | chi2: 0.07505073703106985
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | current memory leak: 2.38 B/s (using 516 data points, chi2=0.08)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,660 | INFO     | could have reported an average CPU frequency of 3261 MHz (22 samples)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | ..............................
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . Timing measurements:
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . get job = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . initial setup = 1 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . payload setup = 4 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . stage-in = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . payload execution = 33351 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . stage-out = 2 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | . log creation = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,661 | INFO     | ..............................
[2025-11-25 15:46:20] 2025-11-25 20:45:40,697 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | job summary report
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | --------------------------------------------------
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | PanDA job id: 6895357740
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | task id: 47556137
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | errors: (none)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | pilot state: finished 
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | transexitcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | exeerrorcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | exeerrordiag: 
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | exitcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | exitmsg: OK
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | cpuconsumptiontime: 131412 s
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | nevents: 1000
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | neventsw: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | pid: 8773
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | pgrp: 8773
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | corecount: 4
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | event service: False
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | sizes: {0: 2284309, 3: 2284571, 11: 2284599, 33359: 2325535, 33363: 2334529, 33365: 2334585, 33368: 2334959}
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | --------------------------------------------------
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:40,698 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | job 6895357740 has completed (purged errors)
[2025-11-25 15:46:20] 2025-11-25 20:45:40,711 | INFO     | overall cleanup function is called
[2025-11-25 15:46:20] 2025-11-25 20:45:41,719 | INFO     | --- collectZombieJob: --- 10, [8773]
[2025-11-25 15:46:20] 2025-11-25 20:45:41,719 | INFO     | zombie collector waiting for pid 8773
[2025-11-25 15:46:20] 2025-11-25 20:45:41,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:46:20] 2025-11-25 20:45:41,720 | INFO     | collected zombie processes
[2025-11-25 15:46:20] 2025-11-25 20:45:41,720 | INFO     | will attempt to kill all subprocesses of pid=8773
[2025-11-25 15:46:20] 2025-11-25 20:45:41,751 | INFO     | process IDs to be killed: [8773] (in reverse order)
[2025-11-25 15:46:20] 2025-11-25 20:45:41,773 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:46:20] 2025-11-25 20:45:41,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:46:20] 2025-11-25 20:45:41,774 | INFO     | did not find any defunct processes belonging to 8773
[2025-11-25 15:46:20] 2025-11-25 20:45:41,775 | INFO     | did not find any defunct processes belonging to 8773
[2025-11-25 15:46:20] 2025-11-25 20:45:41,776 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:46:20] 2025-11-25 20:45:41,776 | INFO     | ready for new job
[2025-11-25 15:46:20] 2025-11-25 20:45:41,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:46:20] 2025-11-25 20:45:41,778 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:41,778 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:46:20] 2025-11-25 20:45:41,778 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:41,778 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:41,778 | INFO     | architecture information:
[2025-11-25 15:46:20] 2025-11-25 20:45:41,779 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:46:20] 2025-11-25 20:45:41,787 | INFO     | cat /etc/os-release:
[2025-11-25 15:46:20] NAME="CentOS Linux"
[2025-11-25 15:46:20] VERSION="7 (Core)"
[2025-11-25 15:46:20] ID="centos"
[2025-11-25 15:46:20] ID_LIKE="rhel fedora"
[2025-11-25 15:46:20] VERSION_ID="7"
[2025-11-25 15:46:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:46:20] ANSI_COLOR="0;31"
[2025-11-25 15:46:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:46:20] HOME_URL="https://www.centos.org/"
[2025-11-25 15:46:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:46:20] 
[2025-11-25 15:46:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:46:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:46:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:46:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:46:20] 
[2025-11-25 15:46:20] 2025-11-25 20:45:41,788 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:42,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 15:46:20] 2025-11-25 20:45:42,310 | INFO     | sufficient remaining disk space (28246540288 B)
[2025-11-25 15:46:20] 2025-11-25 20:45:42,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:46:20] 2025-11-25 20:45:42,311 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:46:20] 2025-11-25 20:45:42,311 | INFO     | update_server=False
[2025-11-25 15:46:20] 2025-11-25 20:45:42,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:46:20] 2025-11-25 20:45:42,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:42,325 | INFO     | all data control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:42,523 | INFO     | all job control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:42,723 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 15:46:20] 2025-11-25 20:45:42,723 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 15:46:20] 2025-11-25 20:45:42,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:42,724 | INFO     | will abort loop
[2025-11-25 15:46:20] 2025-11-25 20:45:43,313 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,316 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,330 | INFO     | [data] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,357 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:43,527 | INFO     | [job] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,549 | INFO     | all payload control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:43,729 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,807 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:43,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:44,227 | INFO     | [job] validate thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:44,247 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:44,251 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:44,374 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:44,554 | INFO     | [payload] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:44,567 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:45,492 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:47,932 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:52,469 | INFO     | job.realtimelogging is not enabled
[2025-11-25 15:46:20] 2025-11-25 20:45:53,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:46:12,826 | INFO     | PID=2411 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 15:46:20] 2025-11-25 20:46:12,826 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:46:20] 2025-11-25 20:46:12,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:46:20] 2025-11-25 20:46:12,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:46:20] 2025-11-25 20:46:14,871 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:46:20] 2025-11-25 20:46:15,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157348837184)>', '<ExcThread(monitor, started 140156744996608)>']
[2025-11-25 15:46:20] 2025-11-25 20:46:15,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:46:20] 2025-11-25 20:46:15,837 | INFO     | [monitor] control thread has ended
[2025-11-25 15:46:20] 2025-11-25 20:46:20,458 | INFO     | all workflow threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:46:20,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:46:20] 2025-11-25 20:46:20,458 | INFO     | traces error code: 0
[2025-11-25 15:46:20] 2025-11-25 20:46:20,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:46:20] 2025-11-25 20:46:20,517 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:46:20] 2025-11-25 20:46:20,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:46:20] 2025-11-25 20:46:20,522 [wrapper] pilotpid: 2411
[2025-11-25 15:46:20] 2025-11-25 20:46:20,524 [wrapper] Pilot exit status: 0
[2025-11-25 15:46:20] 2025-11-25 20:46:20,531 [wrapper] pandaids: 6895357740
[2025-11-25 15:46:20] 2025-11-25 20:46:20,548 [wrapper] cleanup supervisor_pilot 27367 2412
[2025-11-25 15:46:20] 2025-11-25 20:46:20,550 [wrapper] Test setup, not cleaning
[2025-11-25 15:46:20] 2025-11-25 20:46:20,552 [wrapper] apfmon messages muted
[2025-11-25 15:46:20] 2025-11-25 20:46:20,554 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:46:20] 2025-11-25 20:46:20,556 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:46:20]  *** Error codes and diagnostics ***
[2025-11-25 15:46:20]     "exeErrorCode": 0,
[2025-11-25 15:46:20]     "exeErrorDiag": "",
[2025-11-25 15:46:20]     "pilotErrorCode": 0,
[2025-11-25 15:46:20]     "pilotErrorDiag": "",
[2025-11-25 15:46:20]  *** Listing of results directory ***
[2025-11-25 15:46:20] total 1315020
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 07:11 queuedata.json
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:14 pilot3.tar.gz
[2025-11-25 15:46:20] -rwx------ 1 boincer umatlas     36292 Nov 23 07:14 runpilot2-wrapper.sh
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       100 Nov 25 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:46:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 06:29 run_atlas
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       105 Nov 25 06:29 job.xml
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas 408821536 Nov 25 06:29 EVNT.47483658._000727.pool.root.1
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:29 start_atlas.sh
[2025-11-25 15:46:20] drwxrwx--x 2 boincer umatlas      4096 Nov 25 06:29 shared
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 06:29 input.tar.gz
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas         0 Nov 25 06:29 boinc_lockfile
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 06:29 pandaJob.out
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas        57 Nov 25 06:29 setup.sh.local
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas    991894 Nov 25 06:29 agis_schedconf.cvmfs.json
[2025-11-25 15:46:20] drwx------ 5 boincer umatlas      4096 Nov 25 06:29 pilot3
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      6240 Nov 25 15:38 init_data.xml
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:40 boinc_task_state.xml
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 921855830 Nov 25 15:45 HITS.47556137._007221.pool.root.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      1052 Nov 25 15:45 memory_monitor_summary.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   1516240 Nov 25 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   1363353 Nov 25 15:45 log.47556137._007221.job.log.tgz.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      8641 Nov 25 15:45 heartbeat.json
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas        29 Nov 25 15:46 wrapper_checkpoint.txt
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 15:46 boinc_mmap_file
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas        95 Nov 25 15:46 pilot_heartbeat.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      5003 Nov 25 15:46 pilotlog.txt
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   4628957 Nov 25 15:46 log.47556137._007221.job.log.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas       353 Nov 25 15:46 output.list
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       620 Nov 25 15:46 runtime_log
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   6010880 Nov 25 15:46 result.tar.gz
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas       665 Nov 25 15:46 SYONDmv9Nh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmusKKDmlcmIOo.diag
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 15:46 runtime_log.err
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas     21205 Nov 25 15:46 stderr.txt
[2025-11-25 15:46:20] HITS file was successfully produced:
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 921855830 Nov 25 15:45 shared/HITS.pool.root.1
[2025-11-25 15:46:20]  *** Contents of shared directory: ***
[2025-11-25 15:46:20] total 1305964
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas 408821536 Nov 25 06:29 ATLAS.root_0
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 06:29 start_atlas.sh
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 06:29 input.tar.gz
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 921855830 Nov 25 15:45 HITS.pool.root.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   6010880 Nov 25 15:46 result.tar.gz
15:46:22 (31066): run_atlas exited; CPU time 131348.885976
15:46:22 (31066): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN